Amber Archive Aug 2015 by subject
530 messages
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Starting
Sat Aug 01 2015 - 14:00:03 PDT,
Ending
Mon Aug 31 2015 - 17:00:03 PDT
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[AMBER] "mask" command failure
Daniel Roe
(Tue Aug 11 2015 - 12:25:24 PDT)
Ucisik, Melek Nihan
(Tue Aug 11 2015 - 08:20:38 PDT)
Daniel Roe
(Mon Aug 10 2015 - 10:16:13 PDT)
Ucisik, Melek Nihan
(Sun Aug 09 2015 - 13:37:06 PDT)
Ucisik, Melek Nihan
(Fri Aug 07 2015 - 09:20:54 PDT)
Jason Swails
(Thu Aug 06 2015 - 23:21:08 PDT)
Daniel Roe
(Thu Aug 06 2015 - 19:51:49 PDT)
Hai Nguyen
(Thu Aug 06 2015 - 19:46:59 PDT)
Daniel Roe
(Thu Aug 06 2015 - 19:42:45 PDT)
Hai Nguyen
(Thu Aug 06 2015 - 17:26:45 PDT)
Ucisik, Melek Nihan
(Thu Aug 06 2015 - 14:26:40 PDT)
[AMBER] ****** in results?
David A Case
(Mon Aug 17 2015 - 04:38:03 PDT)
Chinh Su Tran To
(Sun Aug 16 2015 - 23:51:48 PDT)
[AMBER] .mdcrd to .trr conversion problem
Daniel Roe
(Wed Aug 05 2015 - 09:09:13 PDT)
Hai Nguyen
(Wed Aug 05 2015 - 08:48:51 PDT)
Hai Nguyen
(Wed Aug 05 2015 - 08:47:37 PDT)
Vishal Nemaysh
(Wed Aug 05 2015 - 08:41:51 PDT)
[AMBER] [cpptraj] Kullback Leibler Divergence cutoff choice
Daniel Roe
(Wed Aug 05 2015 - 10:31:31 PDT)
Eiros Zamora, Juan
(Wed Aug 05 2015 - 09:23:44 PDT)
Adrian Roitberg
(Wed Aug 05 2015 - 09:09:45 PDT)
Eiros Zamora, Juan
(Wed Aug 05 2015 - 09:01:18 PDT)
[AMBER] [Solved] amber14 gpu webpage lists cuda 7.0 as supported
diane lynch
(Wed Aug 12 2015 - 19:02:36 PDT)
Dow Hurst
(Wed Aug 12 2015 - 18:59:31 PDT)
[AMBER] A query about MMPBSA.py calcualtion
Jason Swails
(Sun Aug 16 2015 - 17:36:22 PDT)
anu chandra
(Sun Aug 16 2015 - 06:45:50 PDT)
[AMBER] About the QMMM simulation with LIO software
Yeng-Tseng Wang
(Tue Aug 18 2015 - 01:08:05 PDT)
Yeng-Tseng Wang
(Tue Aug 18 2015 - 00:59:56 PDT)
Adrian Roitberg
(Mon Aug 17 2015 - 11:10:36 PDT)
Jason Swails
(Mon Aug 17 2015 - 09:48:00 PDT)
Yeng-Tseng Wang
(Mon Aug 17 2015 - 09:21:22 PDT)
Jason Swails
(Sat Aug 15 2015 - 10:22:09 PDT)
Yeng-Tseng Wang
(Sat Aug 15 2015 - 09:58:47 PDT)
[AMBER] acetylate and ammoniate
Jason Swails
(Thu Aug 13 2015 - 04:23:38 PDT)
mohammad r
(Thu Aug 13 2015 - 00:06:16 PDT)
David A Case
(Wed Aug 12 2015 - 08:39:54 PDT)
mohammad r
(Wed Aug 12 2015 - 08:04:20 PDT)
Jason Swails
(Wed Aug 12 2015 - 06:10:30 PDT)
mohammad r
(Wed Aug 12 2015 - 05:23:39 PDT)
[AMBER] acpype
Suman Chakrabarty
(Tue Aug 18 2015 - 07:30:17 PDT)
mohammad r
(Tue Aug 18 2015 - 07:04:12 PDT)
David A Case
(Tue Aug 18 2015 - 06:28:25 PDT)
mohammad r
(Tue Aug 18 2015 - 01:17:59 PDT)
mohammad r
(Mon Aug 17 2015 - 23:58:54 PDT)
[AMBER] adding lipid
mohammad r
(Sun Aug 23 2015 - 06:41:32 PDT)
[AMBER] adding NaCl
Jason Swails
(Wed Aug 19 2015 - 04:16:42 PDT)
mohammad r
(Wed Aug 19 2015 - 01:45:14 PDT)
Bill Ross
(Wed Aug 19 2015 - 01:37:32 PDT)
mohammad r
(Wed Aug 19 2015 - 00:25:07 PDT)
mohammad r
(Tue Aug 18 2015 - 22:44:23 PDT)
mohammad r
(Tue Aug 18 2015 - 21:32:47 PDT)
[AMBER] algorithm for clustering solvent molecules?
Jose Borreguero
(Mon Aug 03 2015 - 15:07:23 PDT)
Hai Nguyen
(Mon Aug 03 2015 - 14:43:39 PDT)
Jose Borreguero
(Mon Aug 03 2015 - 14:35:57 PDT)
Hai Nguyen
(Mon Aug 03 2015 - 13:48:24 PDT)
Jason Swails
(Mon Aug 03 2015 - 12:31:21 PDT)
Jose Borreguero
(Mon Aug 03 2015 - 12:21:09 PDT)
Jason Swails
(Mon Aug 03 2015 - 10:17:09 PDT)
Jose Borreguero
(Mon Aug 03 2015 - 09:57:08 PDT)
Jason Swails
(Mon Aug 03 2015 - 07:00:18 PDT)
Jose Borreguero
(Sat Aug 01 2015 - 18:23:42 PDT)
[AMBER] AMBER 14 installation Problem
Himansu
(Tue Aug 11 2015 - 03:23:45 PDT)
[AMBER] AMBER Autoimage Warning
Daniel Roe
(Mon Aug 24 2015 - 10:42:42 PDT)
Jason Swails
(Mon Aug 24 2015 - 10:38:00 PDT)
Brittany Boykin
(Mon Aug 24 2015 - 09:42:04 PDT)
[AMBER] AMBER Digest, Vol 1311, Issue 1
Jason Swails
(Sat Aug 15 2015 - 06:21:17 PDT)
Robin Jain
(Sat Aug 15 2015 - 01:58:47 PDT)
[AMBER] amber14 gpu webpage lists cuda 7.0 as supported
diane lynch
(Wed Aug 12 2015 - 19:01:56 PDT)
Dow Hurst
(Wed Aug 12 2015 - 18:53:11 PDT)
[AMBER] ancpype problem
mohammad r
(Tue Aug 18 2015 - 02:00:36 PDT)
[AMBER] antechamber error
David A Case
(Wed Aug 05 2015 - 09:19:09 PDT)
Lara rajam
(Wed Aug 05 2015 - 07:27:08 PDT)
[AMBER] Antechamber for boronic acid derivatives?
Michael Shokhen
(Tue Aug 04 2015 - 04:26:06 PDT)
David A Case
(Mon Aug 03 2015 - 04:56:36 PDT)
[AMBER] Autoimage Warning
Jason Swails
(Fri Aug 21 2015 - 08:29:38 PDT)
Brittany Boykin
(Fri Aug 21 2015 - 08:10:12 PDT)
[AMBER] Automated restart
Jason Swails
(Sat Aug 08 2015 - 12:03:53 PDT)
Eugene Radchenko
(Sat Aug 08 2015 - 11:25:27 PDT)
David A Case
(Sat Aug 08 2015 - 05:42:16 PDT)
Eugene Radchenko
(Sat Aug 08 2015 - 03:40:50 PDT)
[AMBER] awards applications open for ACS Division of Computers in Chemistry
Carlos Simmerling
(Fri Aug 07 2015 - 08:33:37 PDT)
[AMBER] Bad Atom type during running MMPBSA with cobalt metal ion
Hai Nguyen
(Tue Aug 04 2015 - 22:54:57 PDT)
MOHD HOMAIDUR RAHMAN
(Tue Aug 04 2015 - 22:51:41 PDT)
Jason Swails
(Tue Aug 04 2015 - 05:52:14 PDT)
MOHD HOMAIDUR RAHMAN
(Mon Aug 03 2015 - 23:23:36 PDT)
[AMBER] Big potential difference between conformation in MD simulation and optimized conformation in Gaussian.
Jason Swails
(Mon Aug 17 2015 - 13:18:36 PDT)
Bill Ross
(Mon Aug 17 2015 - 13:09:34 PDT)
Eg eh
(Mon Aug 17 2015 - 12:08:44 PDT)
[AMBER] calculation of rmsd with cpptraj
Krantzman, Kristin D
(Mon Aug 17 2015 - 13:15:08 PDT)
Jason Swails
(Mon Aug 17 2015 - 13:03:23 PDT)
Krantzman, Kristin D
(Mon Aug 17 2015 - 12:53:05 PDT)
[AMBER] cg in GAFF: amb2gmx.pl vs virtualchemistry - LJ well depth
David A Case
(Wed Aug 12 2015 - 18:16:16 PDT)
Sharapa
(Wed Aug 12 2015 - 15:01:40 PDT)
[AMBER] Charge-dependent exchange-dispersion corrections
Lucas A. Defelipe
(Thu Aug 27 2015 - 07:46:23 PDT)
[AMBER] CL topology
Jason Swails
(Wed Aug 19 2015 - 04:42:02 PDT)
Albert
(Wed Aug 19 2015 - 00:04:44 PDT)
[AMBER] closest command in cpptraj
Daniel Roe
(Wed Aug 26 2015 - 07:48:44 PDT)
Joseph Baker
(Tue Aug 25 2015 - 19:21:50 PDT)
Daniel Roe
(Tue Aug 25 2015 - 06:23:48 PDT)
Hai Nguyen
(Mon Aug 24 2015 - 14:31:31 PDT)
Joseph Baker
(Mon Aug 24 2015 - 14:05:48 PDT)
Joseph Baker
(Mon Aug 24 2015 - 12:34:57 PDT)
Joseph Baker
(Mon Aug 24 2015 - 07:17:22 PDT)
Daniel Roe
(Fri Aug 21 2015 - 14:46:05 PDT)
Joseph Baker
(Fri Aug 21 2015 - 12:31:26 PDT)
[AMBER] Confusion in running QM/MMGBSA
Jason Swails
(Sat Aug 29 2015 - 04:09:28 PDT)
David A Case
(Fri Aug 28 2015 - 18:34:08 PDT)
MOHD HOMAIDUR RAHMAN
(Fri Aug 28 2015 - 12:08:49 PDT)
[AMBER] converting amber files
mohammad r
(Tue Aug 18 2015 - 08:03:07 PDT)
Jason Swails
(Tue Aug 18 2015 - 07:42:52 PDT)
Kenneth Huang
(Tue Aug 18 2015 - 07:22:38 PDT)
mohammad r
(Tue Aug 18 2015 - 06:49:37 PDT)
Jason Swails
(Tue Aug 18 2015 - 06:27:30 PDT)
mohammad r
(Tue Aug 18 2015 - 06:10:12 PDT)
Jason Swails
(Tue Aug 18 2015 - 05:57:11 PDT)
George Tzotzos
(Tue Aug 18 2015 - 05:23:27 PDT)
mohammad r
(Tue Aug 18 2015 - 05:12:49 PDT)
[AMBER] could not open mdcrd file
Vahid Kshani
(Fri Aug 07 2015 - 00:05:55 PDT)
Daniel Roe
(Thu Aug 06 2015 - 04:32:49 PDT)
Vahid Kshani
(Thu Aug 06 2015 - 04:22:21 PDT)
[AMBER] cpin error
Jason Swails
(Fri Aug 28 2015 - 07:22:29 PDT)
Arjun Sharma
(Fri Aug 28 2015 - 07:00:23 PDT)
Jason Swails
(Thu Aug 27 2015 - 09:16:14 PDT)
Arjun Sharma
(Thu Aug 27 2015 - 08:31:18 PDT)
Jason Swails
(Wed Aug 26 2015 - 06:43:08 PDT)
Arjun Sharma
(Tue Aug 25 2015 - 16:45:04 PDT)
[AMBER] cpptraj - RMSD
Hai Nguyen
(Sun Aug 09 2015 - 16:01:51 PDT)
Hai Nguyen
(Sun Aug 09 2015 - 14:15:51 PDT)
Amber mail
(Sun Aug 09 2015 - 13:50:33 PDT)
David A Case
(Sun Aug 09 2015 - 05:02:44 PDT)
Amber mail
(Sat Aug 08 2015 - 23:51:02 PDT)
[AMBER] cpptraj cluster in MPI
Daniel Roe
(Mon Aug 17 2015 - 20:12:01 PDT)
Lara rajam
(Mon Aug 17 2015 - 20:03:55 PDT)
Kenneth Huang
(Mon Aug 17 2015 - 19:55:16 PDT)
Lara rajam
(Mon Aug 17 2015 - 19:43:09 PDT)
[AMBER] cpptraj frames clustering limit
Daniel Roe
(Thu Aug 13 2015 - 11:43:25 PDT)
Gaurao Dhoke
(Thu Aug 13 2015 - 01:28:01 PDT)
Daniel Roe
(Wed Aug 12 2015 - 08:06:15 PDT)
Jason Swails
(Wed Aug 12 2015 - 06:59:58 PDT)
Amber mail
(Wed Aug 12 2015 - 06:55:03 PDT)
Gaurao Dhoke
(Wed Aug 12 2015 - 06:46:07 PDT)
[AMBER] cpptraj gist: Eww energies
Thomas Fox
(Wed Aug 12 2015 - 08:31:09 PDT)
Tom Kurtzman
(Mon Aug 10 2015 - 10:54:49 PDT)
Daniel Roe
(Mon Aug 10 2015 - 10:12:57 PDT)
Steven Ramsey
(Mon Aug 10 2015 - 09:35:00 PDT)
Nguyen, Crystal
(Mon Aug 10 2015 - 08:42:30 PDT)
Jason Swails
(Mon Aug 10 2015 - 08:21:59 PDT)
Tom Kurtzman
(Mon Aug 10 2015 - 07:59:44 PDT)
Thomas Fox
(Mon Aug 10 2015 - 02:49:21 PDT)
[AMBER] cpptraj perress RMSD
George Tzotzos
(Tue Aug 18 2015 - 09:57:17 PDT)
Daniel Roe
(Tue Aug 18 2015 - 07:53:51 PDT)
George Tzotzos
(Tue Aug 18 2015 - 07:47:36 PDT)
[AMBER] cpptraj RMSD stats
Daniel Roe
(Tue Aug 18 2015 - 08:34:46 PDT)
George Tzotzos
(Tue Aug 18 2015 - 08:18:22 PDT)
Daniel Roe
(Tue Aug 18 2015 - 06:50:20 PDT)
George Tzotzos
(Tue Aug 18 2015 - 06:43:52 PDT)
[AMBER] cudaMemcpy GpuBuffer::Download failed - hardware or software?
Eugene Radchenko
(Sat Aug 01 2015 - 13:30:14 PDT)
[AMBER] cudaMemcpy GpuBuffer::Download failed - hardware orsoftware?
Ross Walker
(Sun Aug 02 2015 - 20:22:45 PDT)
Eugene Radchenko
(Sun Aug 02 2015 - 01:52:04 PDT)
[AMBER] cudaMemcpy GpuBuffer::Download failed - hardwareorsoftware?
Ross Walker
(Mon Aug 03 2015 - 12:54:35 PDT)
Eugene Radchenko
(Sun Aug 02 2015 - 23:56:46 PDT)
[AMBER] cyclic peptides
David A Case
(Sun Aug 30 2015 - 18:13:33 PDT)
Lara rajam
(Sun Aug 30 2015 - 17:26:27 PDT)
[AMBER] Does it mean the card is damaged?
Ross Walker
(Mon Aug 31 2015 - 08:56:48 PDT)
Karolina Markowska
(Mon Aug 31 2015 - 01:37:44 PDT)
Karolina Markowska
(Fri Aug 28 2015 - 01:04:13 PDT)
Ross Walker
(Thu Aug 27 2015 - 08:06:09 PDT)
Karolina Markowska
(Thu Aug 27 2015 - 01:40:19 PDT)
[AMBER] Does the "contacts" command of cpptraj implement imaging?
Jose Borreguero
(Mon Aug 03 2015 - 09:53:04 PDT)
Jason Swails
(Mon Aug 03 2015 - 06:07:30 PDT)
Jose Borreguero
(Sun Aug 02 2015 - 15:47:19 PDT)
[AMBER] Draw a cube around the molecules
Repic Matej
(Mon Aug 31 2015 - 15:46:32 PDT)
Jason Swails
(Mon Aug 31 2015 - 12:04:14 PDT)
Lorenzo Gontrani
(Mon Aug 31 2015 - 12:02:58 PDT)
Iqbal, Muhammad Sajid
(Mon Aug 31 2015 - 11:56:19 PDT)
[AMBER] dynlmb and TI
Khabiri, Morteza
(Thu Aug 13 2015 - 11:36:11 PDT)
[AMBER] error running mmpbsa.pl
Urszula Uciechowska
(Mon Aug 17 2015 - 02:27:03 PDT)
Urszula Uciechowska
(Mon Aug 17 2015 - 02:12:40 PDT)
[AMBER] Error: an illegal memory access was encountered launching kernel kClearForces
Ross Walker
(Mon Aug 24 2015 - 08:53:49 PDT)
Parker de Waal
(Sat Aug 22 2015 - 13:58:21 PDT)
[AMBER] Force-field and parameters
richa anand
(Wed Aug 12 2015 - 21:32:06 PDT)
[AMBER] GIST vs. 3D-RISM
Tyler Luchko (Lists)
(Wed Aug 12 2015 - 14:30:25 PDT)
Nguyen, Crystal
(Wed Aug 12 2015 - 11:01:26 PDT)
Thomas Fox
(Wed Aug 12 2015 - 08:36:45 PDT)
[AMBER] help in density equilibration
David A Case
(Mon Aug 24 2015 - 05:47:41 PDT)
Bill Ross
(Sun Aug 23 2015 - 23:21:39 PDT)
Robin Jain
(Sun Aug 23 2015 - 21:00:17 PDT)
Robin Jain
(Fri Aug 21 2015 - 22:30:39 PDT)
[AMBER] help in rdf
Daniel Roe
(Fri Aug 14 2015 - 08:47:07 PDT)
Robin Jain
(Fri Aug 14 2015 - 00:59:12 PDT)
[AMBER] Help needed regarding simulating Lipopolysaccharide
David A Case
(Wed Aug 19 2015 - 07:53:11 PDT)
Mrinda Jones
(Wed Aug 19 2015 - 00:20:11 PDT)
Lachele Foley
(Mon Aug 17 2015 - 08:30:24 PDT)
Mrinda Jones
(Mon Aug 17 2015 - 05:43:25 PDT)
David A Case
(Mon Aug 17 2015 - 04:49:21 PDT)
Mrinda Jones
(Mon Aug 17 2015 - 03:41:39 PDT)
[AMBER] How do I study the dimerisation energy (i.e. energy required to form a dimer from two monomeric units) using AMBER?
David A Case
(Sat Aug 29 2015 - 04:38:01 PDT)
Suchetana Gupta
(Sat Aug 29 2015 - 00:15:11 PDT)
[AMBER] how to add lipid
mohammad r
(Fri Aug 28 2015 - 07:26:49 PDT)
Jason Swails
(Fri Aug 28 2015 - 06:34:35 PDT)
mohammad r
(Fri Aug 28 2015 - 00:09:54 PDT)
Repic Matej
(Thu Aug 27 2015 - 14:16:18 PDT)
Charles Lin
(Thu Aug 27 2015 - 10:22:14 PDT)
mohammad r
(Wed Aug 26 2015 - 07:31:13 PDT)
mohammad r
(Wed Aug 26 2015 - 07:17:22 PDT)
Bill Ross
(Tue Aug 25 2015 - 13:13:22 PDT)
Charles Lin
(Tue Aug 25 2015 - 10:10:15 PDT)
mohammad r
(Tue Aug 25 2015 - 03:43:31 PDT)
mohammad r
(Tue Aug 25 2015 - 03:28:23 PDT)
Bill Ross
(Tue Aug 25 2015 - 01:36:57 PDT)
mohammad r
(Mon Aug 24 2015 - 23:14:45 PDT)
mohammad r
(Mon Aug 24 2015 - 21:43:28 PDT)
Bill Ross
(Mon Aug 24 2015 - 12:20:41 PDT)
mohammad r
(Mon Aug 24 2015 - 10:44:33 PDT)
Jason Swails
(Mon Aug 24 2015 - 10:41:52 PDT)
Jason Swails
(Mon Aug 24 2015 - 10:41:06 PDT)
mohammad r
(Mon Aug 24 2015 - 10:28:48 PDT)
mohammad r
(Mon Aug 24 2015 - 09:53:35 PDT)
mohammad r
(Mon Aug 24 2015 - 00:07:42 PDT)
Bill Ross
(Sun Aug 23 2015 - 23:15:09 PDT)
mohammad r
(Sun Aug 23 2015 - 21:38:44 PDT)
Bill Ross
(Sun Aug 23 2015 - 14:05:43 PDT)
mohammad roostaie
(Sun Aug 23 2015 - 07:08:02 PDT)
mohammad r
(Sun Aug 23 2015 - 06:47:36 PDT)
[AMBER] How to construct the Ala3 peptide shown in this picture?
David A Case
(Tue Aug 04 2015 - 06:06:35 PDT)
Jason Swails
(Tue Aug 04 2015 - 05:50:16 PDT)
lipengfei_mail
(Tue Aug 04 2015 - 05:12:38 PDT)
[AMBER] how to neutralized my system with Na+ ions
Hai Nguyen
(Tue Aug 25 2015 - 10:19:14 PDT)
Jason Swails
(Tue Aug 25 2015 - 10:12:34 PDT)
Martina Devi
(Tue Aug 25 2015 - 09:25:44 PDT)
Martina Devi
(Tue Aug 25 2015 - 07:33:43 PDT)
Jason Swails
(Tue Aug 25 2015 - 07:16:01 PDT)
Martina Devi
(Tue Aug 25 2015 - 06:57:52 PDT)
Kasprzak, Wojciech (NIH/NCI) [C]
(Tue Aug 25 2015 - 05:43:08 PDT)
David A Case
(Tue Aug 25 2015 - 05:15:12 PDT)
Martina Devi
(Mon Aug 24 2015 - 23:53:54 PDT)
[AMBER] hpc error
David A Case
(Fri Aug 28 2015 - 05:20:16 PDT)
Damiano Spadoni
(Fri Aug 28 2015 - 04:37:17 PDT)
David A Case
(Tue Aug 18 2015 - 07:12:59 PDT)
Damiano Spadoni
(Tue Aug 18 2015 - 06:43:23 PDT)
[AMBER] hydrogen mass repartitioning visualization in chimera
George Green
(Fri Aug 21 2015 - 06:49:33 PDT)
Jason Swails
(Fri Aug 21 2015 - 06:36:37 PDT)
George Green
(Thu Aug 20 2015 - 18:03:12 PDT)
Nhai
(Thu Aug 20 2015 - 17:32:47 PDT)
George Green
(Thu Aug 20 2015 - 17:31:22 PDT)
George Green
(Thu Aug 20 2015 - 17:18:42 PDT)
Adrian Roitberg
(Thu Aug 20 2015 - 17:15:04 PDT)
George Green
(Thu Aug 20 2015 - 16:49:14 PDT)
[AMBER] Imaging and connectivity error
Jason Swails
(Thu Aug 13 2015 - 07:06:29 PDT)
Harmeet Kaur
(Thu Aug 13 2015 - 04:27:24 PDT)
[AMBER] Immediate PhD Opening In Computational Structural Biology Of Membrane Proteins
Marawan Hussien
(Mon Aug 17 2015 - 20:25:18 PDT)
[AMBER] Immediate Postdoctoral Position Opening In Computational Chemistry And Computer-Aided Drug Design (CADD)
Marawan Hussien
(Mon Aug 17 2015 - 20:26:39 PDT)
[AMBER] Implicit solvent simulation is unexpectedly slow
浅井 賢
(Sun Aug 02 2015 - 06:59:57 PDT)
David A Case
(Sun Aug 02 2015 - 05:30:43 PDT)
浅井 賢
(Sun Aug 02 2015 - 01:21:43 PDT)
[AMBER] ImportError: No module named mcpb.gene_model_files
David A Case
(Fri Aug 21 2015 - 10:33:41 PDT)
Marcelo Andrade Chagas
(Fri Aug 21 2015 - 08:43:50 PDT)
Jason Swails
(Fri Aug 21 2015 - 08:27:38 PDT)
Marcelo Andrade Chagas
(Fri Aug 21 2015 - 08:15:12 PDT)
Marcelo Andrade Chagas
(Mon Aug 17 2015 - 09:05:36 PDT)
Daniel Roe
(Mon Aug 17 2015 - 08:24:12 PDT)
Marcelo Andrade Chagas
(Mon Aug 17 2015 - 04:57:53 PDT)
Marcelo Andrade Chagas
(Thu Aug 13 2015 - 12:14:22 PDT)
[AMBER] ImportError: No module named scipy.optimize
Nhai
(Mon Aug 24 2015 - 21:23:44 PDT)
Sushi Shilpa
(Mon Aug 24 2015 - 21:07:25 PDT)
[AMBER] Installation of AmberTools 15. Overriding earlier installation
Jason Swails
(Mon Aug 03 2015 - 12:35:50 PDT)
George Tzotzos
(Mon Aug 03 2015 - 12:26:25 PDT)
[AMBER] ired analysis: No modes data specified
Kris Feher
(Tue Aug 04 2015 - 10:07:04 PDT)
David A Case
(Tue Aug 04 2015 - 06:44:13 PDT)
Kris Feher
(Tue Aug 04 2015 - 05:23:53 PDT)
[AMBER] issue with 4 fs hydrogen mass repartitioning taking more time than a standard 2 fs simulation in AMBER14
George Green
(Wed Aug 05 2015 - 17:27:23 PDT)
Jason Swails
(Wed Aug 05 2015 - 17:03:14 PDT)
Adrian Roitberg
(Wed Aug 05 2015 - 16:34:10 PDT)
George Green
(Wed Aug 05 2015 - 16:28:31 PDT)
[AMBER] job submission in RED
Martina Devi
(Mon Aug 31 2015 - 03:34:40 PDT)
[AMBER] Job submission script for SGE
Gerald Monard
(Fri Aug 14 2015 - 04:46:34 PDT)
Jason Swails
(Fri Aug 14 2015 - 04:46:27 PDT)
Himansu
(Thu Aug 13 2015 - 16:50:59 PDT)
[AMBER] large .mdcrd splitting
Hai Nguyen
(Thu Aug 06 2015 - 10:44:54 PDT)
David A Case
(Thu Aug 06 2015 - 05:38:20 PDT)
Daniel Roe
(Thu Aug 06 2015 - 04:39:35 PDT)
Vishal Nemaysh
(Thu Aug 06 2015 - 00:49:02 PDT)
[AMBER] Looking for suggestion for analysis
Mohd Farid Ismail
(Thu Aug 27 2015 - 19:42:17 PDT)
[AMBER] Macromolecular crowding force-field and parameters
Lijuan Yu
(Wed Aug 12 2015 - 21:15:55 PDT)
richa anand
(Tue Aug 11 2015 - 20:55:40 PDT)
[AMBER] MCPB.py mismatch error
Eleftherios A P Lambros
(Mon Aug 03 2015 - 13:39:05 PDT)
[AMBER] mismatch base pair from nab
Martina Devi
(Sat Aug 29 2015 - 05:39:10 PDT)
David A Case
(Tue Aug 25 2015 - 12:57:41 PDT)
Carlos Simmerling
(Tue Aug 25 2015 - 06:20:10 PDT)
Martina Devi
(Tue Aug 25 2015 - 05:59:38 PDT)
Carlos Simmerling
(Tue Aug 25 2015 - 04:54:29 PDT)
Martina Devi
(Tue Aug 25 2015 - 04:49:01 PDT)
[AMBER] MM-PBSA atom types
bharat lakhani
(Wed Aug 05 2015 - 11:32:41 PDT)
Jason Swails
(Tue Aug 04 2015 - 09:09:18 PDT)
Kenneth Huang
(Tue Aug 04 2015 - 09:09:13 PDT)
bharat lakhani
(Tue Aug 04 2015 - 08:40:42 PDT)
bharat lakhani
(Mon Aug 03 2015 - 15:50:47 PDT)
Jason Swails
(Mon Aug 03 2015 - 15:37:59 PDT)
bharat lakhani
(Mon Aug 03 2015 - 15:24:53 PDT)
[AMBER] MM-PBSA free energy calculation with keeping x-ray water
Kenneth Huang
(Mon Aug 03 2015 - 12:57:14 PDT)
bharat lakhani
(Mon Aug 03 2015 - 12:45:26 PDT)
[AMBER] MMPBSA error using pbsa2
Ray Luo, Ph.D.
(Sun Aug 09 2015 - 22:11:25 PDT)
Kenneth Huang
(Sun Aug 09 2015 - 12:09:17 PDT)
shenna shearin
(Sun Aug 09 2015 - 04:38:24 PDT)
Ray Luo, Ph.D.
(Fri Aug 07 2015 - 20:59:12 PDT)
shenna shearin
(Fri Aug 07 2015 - 17:33:56 PDT)
[AMBER] MMPBSA.py error
Urszula Uciechowska
(Thu Aug 13 2015 - 03:59:19 PDT)
[AMBER] MMPBSA.py problem
psu4.uic.edu
(Tue Aug 04 2015 - 10:46:09 PDT)
Jason Swails
(Tue Aug 04 2015 - 06:22:10 PDT)
Debodyuti Dutta
(Tue Aug 04 2015 - 03:16:45 PDT)
[AMBER] mmpbsa.py: Error
Jason Swails
(Mon Aug 10 2015 - 13:11:23 PDT)
George Tzotzos
(Mon Aug 10 2015 - 12:56:12 PDT)
Kenneth Huang
(Mon Aug 10 2015 - 12:30:00 PDT)
George Tzotzos
(Mon Aug 10 2015 - 12:00:39 PDT)
Kenneth Huang
(Mon Aug 10 2015 - 11:43:10 PDT)
George Tzotzos
(Mon Aug 10 2015 - 10:37:10 PDT)
Kenneth Huang
(Mon Aug 10 2015 - 10:23:36 PDT)
George Tzotzos
(Mon Aug 10 2015 - 10:23:09 PDT)
Jason Swails
(Mon Aug 10 2015 - 10:22:13 PDT)
George Tzotzos
(Mon Aug 10 2015 - 09:49:29 PDT)
[AMBER] MMPBSA_Ras-Raf complex tutorial
Ruchika Bhat
(Wed Aug 05 2015 - 06:48:17 PDT)
[AMBER] Molsurf: some questions on usage
David A Case
(Fri Aug 28 2015 - 05:03:18 PDT)
George Tzotzos
(Thu Aug 27 2015 - 08:05:44 PDT)
[AMBER] NaN with pmemd.cuda
Scott Le Grand
(Fri Aug 07 2015 - 01:26:10 PDT)
Joseph Baker
(Thu Aug 06 2015 - 11:59:32 PDT)
Ross Walker
(Thu Aug 06 2015 - 00:46:39 PDT)
koushik kasavajhala
(Wed Aug 05 2015 - 20:29:57 PDT)
Joseph Baker
(Wed Aug 05 2015 - 19:41:55 PDT)
Jason Swails
(Wed Aug 05 2015 - 17:10:32 PDT)
Joseph Baker
(Wed Aug 05 2015 - 12:00:58 PDT)
Gould, Ian R
(Tue Aug 04 2015 - 22:14:27 PDT)
Joseph Baker
(Tue Aug 04 2015 - 21:43:22 PDT)
[AMBER] Non-equilibrium pulling with plane-point restraints
Jacob Monroe
(Mon Aug 31 2015 - 16:29:59 PDT)
achim.sandmann.chemie.stud.uni-erlangen.de
(Fri Aug 28 2015 - 01:20:03 PDT)
Jacob Monroe
(Thu Aug 27 2015 - 11:02:29 PDT)
achim.sandmann.chemie.stud.uni-erlangen.de
(Thu Aug 27 2015 - 00:46:14 PDT)
Jacob Monroe
(Tue Aug 25 2015 - 10:45:22 PDT)
[AMBER] NPT equilibration failed
Albert
(Tue Aug 18 2015 - 06:09:08 PDT)
Adrian Roitberg
(Tue Aug 18 2015 - 06:02:38 PDT)
Albert
(Tue Aug 18 2015 - 05:58:56 PDT)
[AMBER] Overflow of the Fortran format used to store coordinates in the inpcrd/restart files.
Jason Swails
(Wed Aug 12 2015 - 06:53:47 PDT)
Amber mail
(Wed Aug 12 2015 - 06:34:40 PDT)
Jason Swails
(Tue Aug 11 2015 - 15:00:03 PDT)
Amber mail
(Tue Aug 11 2015 - 13:53:05 PDT)
Daniel Roe
(Tue Aug 11 2015 - 12:03:09 PDT)
Adrian Roitberg
(Tue Aug 11 2015 - 11:46:44 PDT)
Amber mail
(Tue Aug 11 2015 - 10:33:45 PDT)
Jason Swails
(Tue Aug 11 2015 - 10:26:27 PDT)
Amber mail
(Tue Aug 11 2015 - 10:18:16 PDT)
[AMBER] parmch2 versus parmchk
CHAMI F.
(Fri Aug 07 2015 - 06:00:23 PDT)
[AMBER] PB Bomb in pb_aaradi(): No radius assigned for atom
Sangita Kachhap
(Tue Aug 11 2015 - 09:13:30 PDT)
Jason Swails
(Tue Aug 11 2015 - 08:44:55 PDT)
Sangita Kachhap
(Tue Aug 11 2015 - 08:08:37 PDT)
Jason Swails
(Tue Aug 11 2015 - 07:43:55 PDT)
Sangita Kachhap
(Tue Aug 11 2015 - 07:15:08 PDT)
Jason Swails
(Tue Aug 11 2015 - 06:04:03 PDT)
Sangita Kachhap
(Tue Aug 11 2015 - 05:09:01 PDT)
Jason Swails
(Tue Aug 11 2015 - 04:53:13 PDT)
Sangita Kachhap
(Tue Aug 11 2015 - 03:05:20 PDT)
[AMBER] PCA analysis
Daniel Roe
(Tue Aug 04 2015 - 19:10:47 PDT)
anu chandra
(Tue Aug 04 2015 - 15:55:05 PDT)
[AMBER] PCA: comparing PCs from different trajectories
Daniel Roe
(Thu Aug 06 2015 - 13:06:45 PDT)
Eiros Zamora, Juan
(Thu Aug 06 2015 - 09:32:48 PDT)
George Tzotzos
(Thu Aug 06 2015 - 07:18:08 PDT)
Daniel Roe
(Wed Aug 05 2015 - 11:18:55 PDT)
George Tzotzos
(Wed Aug 05 2015 - 10:39:05 PDT)
Daniel Roe
(Wed Aug 05 2015 - 10:16:24 PDT)
George Tzotzos
(Wed Aug 05 2015 - 01:24:45 PDT)
[AMBER] PCA: generate histogram
Daniel Roe
(Mon Aug 03 2015 - 07:47:48 PDT)
George Tzotzos
(Mon Aug 03 2015 - 07:04:28 PDT)
Daniel Roe
(Mon Aug 03 2015 - 07:01:30 PDT)
George Tzotzos
(Mon Aug 03 2015 - 06:48:32 PDT)
Daniel Roe
(Mon Aug 03 2015 - 06:14:52 PDT)
George Tzotzos
(Mon Aug 03 2015 - 03:46:55 PDT)
[AMBER] pH-REMD theory
Jason Swails
(Thu Aug 13 2015 - 05:43:41 PDT)
whb
(Wed Aug 12 2015 - 23:58:47 PDT)
[AMBER] PMEMD: Warning: ieee_inexact is signaling
Daniel Roe
(Mon Aug 03 2015 - 12:59:58 PDT)
Khabiri, Morteza
(Mon Aug 03 2015 - 12:40:14 PDT)
[AMBER] Problem In Performing MMPBSA Calculation for System Containing Lipids
Jason Swails
(Wed Aug 26 2015 - 05:41:47 PDT)
David A Case
(Wed Aug 26 2015 - 05:33:02 PDT)
anilkumarsahoo.physics.iisc.ernet.in
(Tue Aug 25 2015 - 17:04:47 PDT)
Daniel Roe
(Tue Aug 25 2015 - 06:26:16 PDT)
anilkumarsahoo.physics.iisc.ernet.in
(Tue Aug 25 2015 - 04:29:38 PDT)
[AMBER] Problem with cpptraj autoimage command
Karolina Markowska
(Fri Aug 07 2015 - 13:48:25 PDT)
Daniel Roe
(Fri Aug 07 2015 - 06:18:33 PDT)
Karolina Markowska
(Fri Aug 07 2015 - 02:35:48 PDT)
Daniel Roe
(Thu Aug 06 2015 - 07:29:35 PDT)
Jason Swails
(Thu Aug 06 2015 - 06:19:53 PDT)
Karolina Markowska
(Thu Aug 06 2015 - 04:35:59 PDT)
[AMBER] Problem with using the 12-6-4 LJ-Type Nonbonded Model in a an RNA-Mg system
Kasprzak, Wojciech (NIH/NCI) [C]
(Thu Aug 20 2015 - 13:08:09 PDT)
[AMBER] RED Server for Altered Amino Acid
Edward Kalkreuter
(Wed Aug 05 2015 - 19:56:11 PDT)
[AMBER] Regarding DNA forcefield in Amber14
Vlad Cojocaru
(Fri Aug 07 2015 - 00:55:30 PDT)
Thomas Cheatham
(Thu Aug 06 2015 - 18:31:22 PDT)
Nhai
(Wed Aug 05 2015 - 06:07:45 PDT)
Vlad Cojocaru
(Wed Aug 05 2015 - 06:03:05 PDT)
Mahad Gatti Iou
(Wed Aug 05 2015 - 05:59:51 PDT)
Hai Nguyen
(Wed Aug 05 2015 - 05:48:22 PDT)
Mahad Gatti Iou
(Wed Aug 05 2015 - 05:47:30 PDT)
Vlad Cojocaru
(Wed Aug 05 2015 - 01:40:11 PDT)
Vlad Cojocaru
(Wed Aug 05 2015 - 01:25:06 PDT)
Pragya Priyadarshini
(Wed Aug 05 2015 - 00:35:34 PDT)
[AMBER] Regarding No of Hydrogen bonds (vs) Residue wise
Garisekurthi Satheesh
(Mon Aug 24 2015 - 11:22:15 PDT)
Hai Nguyen
(Mon Aug 24 2015 - 10:26:12 PDT)
Daniel Roe
(Mon Aug 24 2015 - 07:40:28 PDT)
Garisekurthi Satheesh
(Sun Aug 23 2015 - 21:15:03 PDT)
[AMBER] Regarding printing of trajectory
MOHD HOMAIDUR RAHMAN
(Tue Aug 25 2015 - 11:11:30 PDT)
Daniel Roe
(Tue Aug 25 2015 - 07:34:16 PDT)
MOHD HOMAIDUR RAHMAN
(Tue Aug 25 2015 - 07:22:11 PDT)
David A Case
(Tue Aug 25 2015 - 05:20:19 PDT)
MOHD HOMAIDUR RAHMAN
(Tue Aug 25 2015 - 00:11:55 PDT)
[AMBER] RESP fitting
Mahmood Jasim
(Thu Aug 20 2015 - 08:43:57 PDT)
cieplak.cgl.ucsf.edu
(Wed Aug 19 2015 - 13:48:16 PDT)
David A Case
(Wed Aug 19 2015 - 08:03:07 PDT)
Mahmood Jasim
(Wed Aug 19 2015 - 05:46:21 PDT)
[AMBER] RMSD and average value of interatomic distance?
Michael Shokhen
(Sat Aug 15 2015 - 08:31:34 PDT)
Daniel Roe
(Sat Aug 15 2015 - 08:13:50 PDT)
Michael Shokhen
(Sat Aug 15 2015 - 07:49:14 PDT)
Adrian Roitberg
(Sat Aug 15 2015 - 07:15:34 PDT)
Michael Shokhen
(Sat Aug 15 2015 - 07:12:58 PDT)
Jason Swails
(Sat Aug 15 2015 - 05:45:33 PDT)
Michael Shokhen
(Sat Aug 15 2015 - 00:30:26 PDT)
[AMBER] saveamberparm
mohammad r
(Mon Aug 17 2015 - 13:20:40 PDT)
David A Case
(Mon Aug 17 2015 - 08:34:19 PDT)
Daniel Roe
(Mon Aug 17 2015 - 08:17:23 PDT)
mohammad r
(Mon Aug 17 2015 - 07:14:26 PDT)
[AMBER] Segmentation Fault with pmemd
David A Case
(Sun Aug 30 2015 - 12:46:12 PDT)
Ziheng Wang
(Sun Aug 30 2015 - 07:26:15 PDT)
David A Case
(Sat Aug 29 2015 - 04:42:34 PDT)
Jason Swails
(Sat Aug 29 2015 - 04:22:42 PDT)
Ziheng Wang
(Sat Aug 29 2015 - 01:02:03 PDT)
[AMBER] Solvent accessible surface area (SASA) calculation in CPPTRJ
Jason Swails
(Mon Aug 24 2015 - 12:23:21 PDT)
George Tzotzos
(Mon Aug 24 2015 - 12:03:56 PDT)
Jason Swails
(Mon Aug 24 2015 - 10:02:33 PDT)
George Tzotzos
(Mon Aug 24 2015 - 09:29:15 PDT)
David A Case
(Fri Aug 21 2015 - 10:36:59 PDT)
anu chandra
(Fri Aug 21 2015 - 08:58:51 PDT)
Jason Swails
(Thu Aug 20 2015 - 11:25:46 PDT)
anu chandra
(Thu Aug 20 2015 - 09:35:31 PDT)
[AMBER] SPAM
Jason Swails
(Tue Aug 11 2015 - 06:39:24 PDT)
Sarah Graham
(Thu Aug 06 2015 - 11:06:23 PDT)
[AMBER] STOP PMEMD Terminated Abnormally!
Pragya Priyadarshini
(Mon Aug 17 2015 - 21:15:12 PDT)
Jason Swails
(Mon Aug 17 2015 - 09:49:38 PDT)
Pragya Priyadarshini
(Mon Aug 17 2015 - 07:24:53 PDT)
David A Case
(Mon Aug 17 2015 - 04:51:55 PDT)
Pragya Priyadarshini
(Mon Aug 17 2015 - 04:14:11 PDT)
[AMBER] the better box size
Bill Ross
(Fri Aug 14 2015 - 12:18:17 PDT)
Jason Swails
(Fri Aug 14 2015 - 11:12:20 PDT)
Investigador Química
(Fri Aug 14 2015 - 10:45:56 PDT)
[AMBER] the better box size for calculating host-guest interaction energies
Investigador Química
(Sat Aug 22 2015 - 13:38:37 PDT)
Investigador Química
(Sat Aug 22 2015 - 13:35:50 PDT)
Investigador Química
(Sat Aug 22 2015 - 13:34:10 PDT)
Adrian Roitberg
(Thu Aug 20 2015 - 09:41:52 PDT)
David A Case
(Thu Aug 20 2015 - 08:51:23 PDT)
Jason Swails
(Thu Aug 20 2015 - 07:32:34 PDT)
Investigador Química
(Thu Aug 20 2015 - 07:09:12 PDT)
Jason Swails
(Wed Aug 19 2015 - 08:18:06 PDT)
Investigador Química
(Wed Aug 19 2015 - 07:43:41 PDT)
[AMBER] The protein is Leaving the water box!
Jason Swails
(Fri Aug 14 2015 - 06:00:11 PDT)
Amber mail
(Fri Aug 14 2015 - 05:11:25 PDT)
Jason Swails
(Fri Aug 14 2015 - 04:38:36 PDT)
Amber mail
(Thu Aug 13 2015 - 17:36:59 PDT)
[AMBER] Thermodynamic integration and segmentation fault
Khabiri, Morteza
(Mon Aug 31 2015 - 06:40:15 PDT)
[AMBER] Thermodynamic integration goes wrong in lambda =0 while lambda = 1 is ok!!
David A Case
(Thu Aug 06 2015 - 09:55:44 PDT)
Khabiri, Morteza
(Thu Aug 06 2015 - 07:43:17 PDT)
David A Case
(Thu Aug 06 2015 - 05:35:01 PDT)
Ying-Chieh Sun
(Wed Aug 05 2015 - 20:29:23 PDT)
Khabiri, Morteza
(Wed Aug 05 2015 - 18:34:39 PDT)
[AMBER] tleap ask for bond to zinc ion
Marcelo Andrade Chagas
(Mon Aug 24 2015 - 10:33:00 PDT)
David A Case
(Mon Aug 24 2015 - 05:34:04 PDT)
Bill Ross
(Sun Aug 23 2015 - 14:15:46 PDT)
Jorgen Simonsen
(Sun Aug 23 2015 - 08:49:01 PDT)
[AMBER] Total interaction energy between monomeric units of a dimer
Jason Swails
(Wed Aug 26 2015 - 10:21:49 PDT)
anu chandra
(Wed Aug 26 2015 - 10:04:15 PDT)
Hector A. Baldoni
(Thu Aug 20 2015 - 06:21:15 PDT)
Jason Swails
(Thu Aug 20 2015 - 06:12:14 PDT)
Hector A. Baldoni
(Thu Aug 20 2015 - 05:09:43 PDT)
David A Case
(Thu Aug 20 2015 - 05:00:55 PDT)
anu chandra
(Thu Aug 20 2015 - 04:04:10 PDT)
David A Case
(Wed Aug 19 2015 - 09:22:16 PDT)
George Tzotzos
(Wed Aug 19 2015 - 08:57:09 PDT)
anu chandra
(Tue Aug 18 2015 - 07:17:19 PDT)
Jason Swails
(Tue Aug 18 2015 - 06:08:12 PDT)
Daniel Roe
(Tue Aug 18 2015 - 06:05:49 PDT)
anu chandra
(Tue Aug 18 2015 - 04:55:46 PDT)
[AMBER] Trying to perform a heating MD in increments
Amber mail
(Tue Aug 04 2015 - 07:02:03 PDT)
Jason Swails
(Tue Aug 04 2015 - 05:55:30 PDT)
Abelak, Kavin
(Tue Aug 04 2015 - 03:13:19 PDT)
Amber mail
(Tue Aug 04 2015 - 01:39:02 PDT)
[AMBER] upgrading to AT15 (from AT14)
David A Case
(Mon Aug 24 2015 - 05:52:05 PDT)
Massimiliano Porrini
(Mon Aug 24 2015 - 03:28:46 PDT)
David A Case
(Fri Aug 21 2015 - 04:58:44 PDT)
Massimiliano Porrini
(Fri Aug 21 2015 - 02:46:05 PDT)
mohammad r
(Tue Aug 18 2015 - 23:10:09 PDT)
David A Case
(Tue Aug 18 2015 - 10:48:51 PDT)
Jason Swails
(Tue Aug 18 2015 - 10:25:55 PDT)
Massimiliano Porrini
(Tue Aug 18 2015 - 09:47:00 PDT)
[AMBER] using chamber to convert psf to prmtop
Jason Swails
(Tue Aug 11 2015 - 15:02:15 PDT)
KK R
(Tue Aug 11 2015 - 13:08:42 PDT)
[AMBER] Using MMPBSA.py with CHARMM force field
Jason Swails
(Fri Aug 21 2015 - 10:42:17 PDT)
Ara Abramyan
(Fri Aug 21 2015 - 08:47:48 PDT)
David A Case
(Fri Aug 21 2015 - 08:10:27 PDT)
Jason Swails
(Fri Aug 21 2015 - 06:40:41 PDT)
Ara Abramyan
(Thu Aug 20 2015 - 13:43:11 PDT)
[AMBER] Warning: ieee_inexact is signaling PMEMD Terminated Abnormally!
Khabiri, Morteza
(Wed Aug 12 2015 - 11:06:34 PDT)
Daniel Roe
(Wed Aug 12 2015 - 09:58:05 PDT)
Khabiri, Morteza
(Wed Aug 12 2015 - 09:43:14 PDT)
Daniel Roe
(Wed Aug 12 2015 - 08:18:21 PDT)
Khabiri, Morteza
(Wed Aug 12 2015 - 06:36:57 PDT)
[AMBER] What is the best way to study a dynamics route of a molecule to enter a protein
David A Case
(Fri Aug 28 2015 - 10:23:58 PDT)
Wenyu Qian
(Fri Aug 28 2015 - 07:55:45 PDT)
David A Case
(Fri Aug 28 2015 - 05:11:22 PDT)
Bill Ross
(Thu Aug 27 2015 - 16:47:45 PDT)
Mohammad Salem
(Thu Aug 27 2015 - 15:44:10 PDT)
David A Case
(Wed Aug 26 2015 - 05:26:19 PDT)
Wenyu Qian
(Tue Aug 25 2015 - 15:04:08 PDT)
[AMBER] xleap numbering in residues
David A Case
(Thu Aug 20 2015 - 04:54:43 PDT)
Lara rajam
(Wed Aug 19 2015 - 18:32:00 PDT)
PMEMD: Warning: ieee_inexact is signaling
Jason Swails
(Mon Aug 03 2015 - 08:19:11 PDT)
Khabiri, Morteza
(Mon Aug 03 2015 - 06:26:01 PDT)
Regarding AMBER 14
praSanna kuMar naYak
(Wed Aug 12 2015 - 04:26:51 PDT)
Jason Swails
(Wed Aug 12 2015 - 04:00:56 PDT)
praSanna kuMar naYak
(Wed Aug 12 2015 - 00:04:10 PDT)
Jason Swails
(Tue Aug 11 2015 - 06:31:22 PDT)
praSanna kuMar naYak
(Tue Aug 11 2015 - 06:23:25 PDT)
Jason Swails
(Tue Aug 11 2015 - 06:10:54 PDT)
Kenneth Huang
(Tue Aug 11 2015 - 06:05:07 PDT)
praSanna kuMar naYak
(Tue Aug 11 2015 - 04:59:48 PDT)
David A Case
(Tue Aug 11 2015 - 04:41:18 PDT)
praSanna kuMar naYak
(Tue Aug 11 2015 - 01:47:38 PDT)
Regarding AMBER14 Error
David A Case
(Tue Aug 11 2015 - 04:42:16 PDT)
praSanna kuMar naYak
(Tue Aug 11 2015 - 01:47:52 PDT)
Last message date
:
Mon Aug 31 2015 - 17:00:03 PDT
Archived on
: Mon Dec 23 2024 - 05:55:07 PST
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