Re: [AMBER] .mdcrd to .trr conversion problem

From: Hai Nguyen <nhai.qn.gmail.com>
Date: Wed, 5 Aug 2015 11:48:51 -0400

I forgot to add example

parm myparm.parm7
trajin my_traj.nc
trajout my_traj.trr

On Wed, Aug 5, 2015 at 11:47 AM, Hai Nguyen <nhai.qn.gmail.com> wrote:

> you can use cpptraj for this.
>
> check page 540 (http://ambermd.org/doc12/Amber15.pdf)
>
> just curious, why do you need to convert to trr file?
>
> Hai
>
> On Wed, Aug 5, 2015 at 11:41 AM, Vishal Nemaysh <
> vishal.bioinfotech.gmail.com> wrote:
>
>> Respected Sir/Madam
>>
>> i have tried to convert my AMBER trajectory (.mdcrd) file in to GROMACS
>> trajectory format (.trr) by using VMD, but my *.mdcrd* file size is very
>> large (*25 GB*), when i upload the file my computer system is totaly hang
>> after completion and it will not give any response... sir how can i
>> convert
>> my this large file into .trr format.... plz kindly suggest me how can i
>> resolve this prob...
>>
>> thanking you,
>>
>> --
>> Vishal
>> Research Scholar,
>> Neuropharmaceutical Chemistry lab.,
>> Dr. B. R. Ambedkar Center for Biomedical Research,
>> University of Delhi, Delhi-110007
>> Email: *vishal.bioinfotech.gmail.com <vishal.bioinfotech.gmail.com>*
>> Phone: 91-11-27662778 Mobile: 91+9650736653
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
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Received on Wed Aug 05 2015 - 09:00:03 PDT
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