Re: [AMBER] FW: Regarding AMBER 14

From: praSanna kuMar naYak <>
Date: Wed, 12 Aug 2015 12:34:10 +0530

If I'm going to install serial and parallel version of AMBER14 in different directories, so how to make use $AMBERHOME? Is it like to set every time you want to use either versions of MABER14. Please suggest which one make default AMBERHOME ?

-----Original Message-----
From: Jason Swails []
Sent: 11 August 2015 19:01
To: AMBER Mailing List <>
Subject: Re: [AMBER] FW: Regarding AMBER 14

On Tue, Aug 11, 2015 at 9:23 AM, praSanna kuMar naYak <> wrote:

> But if I will not run "make" inside individual directories inside
> AmberTools/src, then not all required binaries are created inside
> $AMBERHOME/bin directory.

​This is not true. If you only configure with -mpi, then only MPI-enabled programs will be built (as Kenneth mentioned). sqm is a serial program, so you need to install the serial version.

> So please specify the proper installation procedure.

​It is exactly what is specified in the manual. Please take some time to read chapter 2 of the manual.

Good luck,

Jason M. Swails
Rutgers University
Postdoctoral Researcher
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Received on Wed Aug 12 2015 - 00:30:03 PDT
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