Amber Archive Apr 2013: by subject

[AMBER-Developers] [AMBER] Compilation errors for AmberTools 13 with OpenMP
- Scott Brozell (Sun Apr 28 2013 - 15:29:57 PDT)
- Ross Walker (Sun Apr 28 2013 - 13:18:21 PDT)
- David A Case (Sun Apr 28 2013 - 04:10:11 PDT)
[AMBER] # of snapshots for force does not match that of mdcrd
- kurisaki (Sun Apr 14 2013 - 01:58:13 PDT)
- kurisaki (Sat Apr 13 2013 - 23:20:21 PDT)
[AMBER] =4/7/2013 3:34:47 PM=
- Acoot Brett (Sun Apr 07 2013 - 07:35:00 PDT)
[AMBER] [AMBER-Developers] Compilation errors for AmberTools 13 with OpenMP
- M. L. Dodson (Sun Apr 28 2013 - 14:07:32 PDT)
[AMBER] About halogen in MMPBSA calculation in AMBER9
- Ray Luo, Ph.D. (Fri Apr 19 2013 - 14:52:09 PDT)
- Wang Bo (Fri Apr 19 2013 - 14:43:50 PDT)
- Wang Bo (Fri Apr 19 2013 - 12:17:11 PDT)
[AMBER] About modelling the separation of the "DNA" strands
- Jason Swails (Tue Apr 23 2013 - 19:02:21 PDT)
- Mu Xia (Thu Apr 11 2013 - 01:36:50 PDT)
- Mu Xia (Mon Apr 08 2013 - 19:09:33 PDT)
[AMBER] Accelerated Molecular Dynamics
- Diego Javier Alonso de Armiño (Fri Apr 05 2013 - 08:44:33 PDT)
[AMBER] AMBER CUDA Installation
- Scott Le Grand (Tue Apr 30 2013 - 11:13:26 PDT)
- Kanin Wichapong (Tue Apr 30 2013 - 09:17:59 PDT)
[AMBER] Amber installation problems
- Igor Marques (Mon Apr 15 2013 - 08:58:01 PDT)
- Tru Huynh (Mon Apr 15 2013 - 07:40:00 PDT)
- Jason Swails (Mon Apr 15 2013 - 04:29:10 PDT)
- Donato Pera (Mon Apr 15 2013 - 03:16:31 PDT)
- Igor Marques (Sat Apr 13 2013 - 03:31:28 PDT)
- David A Case (Fri Apr 12 2013 - 17:37:54 PDT)
- Igor Marques (Fri Apr 12 2013 - 10:40:34 PDT)
- Ross Walker (Fri Apr 12 2013 - 08:05:58 PDT)
- David A Case (Fri Apr 12 2013 - 04:44:47 PDT)
- Donato Pera (Fri Apr 12 2013 - 01:49:01 PDT)
- Donato Pera (Thu Apr 11 2013 - 23:57:20 PDT)
- Jason Swails (Wed Apr 10 2013 - 07:55:36 PDT)
- Donato Pera (Wed Apr 10 2013 - 07:32:19 PDT)
- Daniel Roe (Wed Apr 10 2013 - 07:04:11 PDT)
- Donato Pera (Wed Apr 10 2013 - 06:48:39 PDT)
[AMBER] Amber MPI CPU number problem
- Jason Swails (Mon Apr 22 2013 - 19:15:37 PDT)
- Donato Pera (Mon Apr 22 2013 - 02:34:43 PDT)
[AMBER] AMBER Training Workshop - Recife, Brazil - Save the Date
- Ross Walker (Mon Apr 22 2013 - 12:53:01 PDT)
[AMBER] amber tutorial13 :constructing and simulating crystals with amber12
- David A Case (Thu Apr 25 2013 - 16:48:03 PDT)
- Yongxiu Li (Mon Apr 22 2013 - 05:16:14 PDT)
[AMBER] AMBER12 GPU performance
- Aron Broom (Sat Apr 06 2013 - 21:55:47 PDT)
- Neha Gandhi (Sat Apr 06 2013 - 21:17:09 PDT)
[AMBER] AmberTools12 re-installation test log file
- Saugata Hazra (Tue Apr 16 2013 - 20:23:30 PDT)
- Jason Swails (Tue Apr 16 2013 - 18:27:50 PDT)
- Saugata Hazra (Tue Apr 16 2013 - 14:46:11 PDT)
[AMBER] ambertools13 fails to update
- M. L. Dodson (Mon Apr 22 2013 - 17:25:21 PDT)
- Jonathan Gough (Mon Apr 22 2013 - 17:09:08 PDT)
- Jason Swails (Mon Apr 22 2013 - 15:59:40 PDT)
- Jonathan Gough (Mon Apr 22 2013 - 15:45:18 PDT)
- Jason Swails (Mon Apr 22 2013 - 15:39:04 PDT)
- Jonathan Gough (Mon Apr 22 2013 - 15:32:22 PDT)
[AMBER] aMD question: How to read the amd.log file
- filip fratev (Tue Apr 16 2013 - 18:15:50 PDT)
- diego alonso (Tue Apr 16 2013 - 16:00:12 PDT)
- Diego Javier Alonso de Armiño (Tue Apr 16 2013 - 14:56:54 PDT)
[AMBER] aMD reweighting and amd.log file.
- Diego Javier Alonso de Armiño (Wed Apr 17 2013 - 07:54:04 PDT)
- Diego Javier Alonso de Armiño (Tue Apr 16 2013 - 16:05:56 PDT)
[AMBER] aMD simulations in amber12
- Jian Yin (Fri Apr 12 2013 - 10:21:20 PDT)
- Soumya Lipsa Rath (Fri Apr 12 2013 - 09:28:18 PDT)
- Neha Gandhi (Fri Apr 12 2013 - 09:20:08 PDT)
- Ross Walker (Fri Apr 12 2013 - 08:10:43 PDT)
- Carlos Simmerling (Fri Apr 12 2013 - 06:12:35 PDT)
- Neha Gandhi (Fri Apr 12 2013 - 05:59:07 PDT)
[AMBER] Analysis of side-chain conformational changes
- anu chandra (Mon Apr 08 2013 - 01:55:18 PDT)
- anu chandra (Fri Apr 05 2013 - 22:59:44 PDT)
- Daniel Roe (Fri Apr 05 2013 - 09:27:38 PDT)
- anu chandra (Thu Apr 04 2013 - 03:10:55 PDT)
[AMBER] ante-MMPBSA.py failed
- Bill Miller III (Tue Apr 02 2013 - 11:45:27 PDT)
- Albert (Tue Apr 02 2013 - 11:18:14 PDT)
[AMBER] ante-MMPBSA.py problem
- Chris Chris (Fri Apr 19 2013 - 23:18:59 PDT)
- Jason Swails (Fri Apr 19 2013 - 11:07:25 PDT)
- Chris Chris (Fri Apr 19 2013 - 09:56:37 PDT)
[AMBER] antechamber espgen error for molybdenum complex:fitting values are missing
- Sergio R Aragon (Mon Apr 29 2013 - 19:52:56 PDT)
- Sergio R Aragon (Mon Apr 29 2013 - 17:57:49 PDT)
[AMBER] Anyone (else) at the ACS meeting in NOLA?
- Jonathan Gough (Sun Apr 07 2013 - 19:26:03 PDT)
[AMBER] bug in impose command in amber tleap
- David A Case (Mon Apr 29 2013 - 11:42:11 PDT)
- sandeep singh (Mon Apr 29 2013 - 11:21:19 PDT)
[AMBER] bug report: tinker_to_amberfailedforsystemscontainingcounter ions
- Amber Amoeba (Wed Apr 10 2013 - 13:52:47 PDT)
[AMBER] CalcError: sander.APBS failed with prmtop using MMPBSA.py by Amber 11 and AmberTools 12
- dbaogen (Thu Apr 04 2013 - 19:14:43 PDT)
[AMBER] calculating diffusion constants - multiplying factor (10/6)?
- George M Giambasu (Mon Apr 01 2013 - 07:19:15 PDT)
- Vijay Manickam Achari (Mon Apr 01 2013 - 02:21:09 PDT)
[AMBER] carbohydrate-GLYCAM 06-cellulose Iβ
- Rasha Alqus (Fri Apr 26 2013 - 06:19:53 PDT)
- David A Case (Mon Apr 22 2013 - 17:56:33 PDT)
- Lachele Foley (Mon Apr 22 2013 - 09:59:58 PDT)
- Rasha Alqus (Mon Apr 22 2013 - 09:14:49 PDT)
[AMBER] Changing vdW parameters for HO-type atom
- Brian Radak (Mon Apr 22 2013 - 06:09:59 PDT)
- Morteza Chehel Amirani (Fri Apr 19 2013 - 15:17:25 PDT)
[AMBER] chromium in leap
- FyD (Thu Apr 04 2013 - 23:25:55 PDT)
- marta wisniewska. (Thu Apr 04 2013 - 15:02:44 PDT)
[AMBER] Clarification on sander
- Ross Walker (Tue Apr 16 2013 - 13:13:08 PDT)
- George Tzotzos (Tue Apr 16 2013 - 13:02:31 PDT)
- Jason Swails (Tue Apr 16 2013 - 12:07:03 PDT)
- George Tzotzos (Tue Apr 16 2013 - 11:24:08 PDT)
[AMBER] clustering based on side-chain conformations
- Daniel Roe (Tue Apr 02 2013 - 07:28:19 PDT)
- anu chandra (Mon Apr 01 2013 - 00:40:07 PDT)
[AMBER] clustering places all frames in one cluster
- Daniel Roe (Thu Apr 25 2013 - 07:32:52 PDT)
- Amparo Garcia Lopez (Thu Apr 25 2013 - 02:20:04 PDT)
- Miguel Ortiz Lombardía (Mon Apr 22 2013 - 06:11:46 PDT)
- Vaibhav Dixit (Sun Apr 21 2013 - 22:20:38 PDT)
- Amparo Garcia Lopez (Fri Apr 19 2013 - 01:14:55 PDT)
- Daniel Roe (Mon Apr 15 2013 - 07:09:51 PDT)
- Amparo Garcia Lopez (Mon Apr 15 2013 - 05:44:15 PDT)
- Amparo Garcia Lopez (Mon Apr 15 2013 - 01:26:00 PDT)
[AMBER] Compilation errors for AmberTools 13 with OpenMP
- M. L. Dodson (Sun Apr 28 2013 - 15:38:45 PDT)
- David A Case (Sun Apr 28 2013 - 13:34:08 PDT)
- M. L. Dodson (Sun Apr 28 2013 - 05:55:56 PDT)
- M. L. Dodson (Sat Apr 27 2013 - 17:05:15 PDT)
- Eugene Yedvabny (Sat Apr 27 2013 - 15:26:15 PDT)
- Jason Swails (Sat Apr 27 2013 - 14:43:14 PDT)
- M. L. Dodson (Sat Apr 27 2013 - 07:21:34 PDT)
- Jason Swails (Sat Apr 27 2013 - 06:53:51 PDT)
- Eugene Yedvabny (Thu Apr 25 2013 - 18:32:34 PDT)
[AMBER] Compiling problems with -openmp
- David A Case (Sun Apr 28 2013 - 03:57:37 PDT)
- Eugene Yedvabny (Fri Apr 26 2013 - 17:22:00 PDT)
- David A Case (Fri Apr 26 2013 - 12:51:28 PDT)
[AMBER] Constant pH calculation: calcpka
- Anselm Horn (Thu Apr 11 2013 - 09:17:27 PDT)
- Jason Swails (Thu Apr 11 2013 - 07:36:39 PDT)
- Anselm Horn (Wed Apr 10 2013 - 23:47:18 PDT)
[AMBER] correlation matrix of side-chain dihedral angle in PTRAJ
- Daniel Roe (Mon Apr 15 2013 - 07:12:09 PDT)
- anu chandra (Fri Apr 12 2013 - 04:25:42 PDT)
[AMBER] cudaMemcpyToSymbol: SetSim copy to Sim failed for K20x using JAC and Cellulose benchmarks
- Chinh Su Tran To (Thu Apr 25 2013 - 22:46:46 PDT)
- Ross Walker (Thu Apr 25 2013 - 21:10:22 PDT)
- Chinh Su Tran To (Thu Apr 25 2013 - 21:00:30 PDT)
[AMBER] Cyclic peptide problem
- David A Case (Thu Apr 25 2013 - 04:30:23 PDT)
- Changqing Yan (Thu Apr 25 2013 - 00:56:02 PDT)
- Changqing Yan (Thu Apr 25 2013 - 00:55:18 PDT)
- Jason Swails (Wed Apr 24 2013 - 08:34:50 PDT)
- Changqing Yan (Wed Apr 24 2013 - 07:20:59 PDT)
[AMBER] Different binding energy order between ATP (GTP) and protein in Amber ff10 FF and CHARMM27 FF using MMPBSA.py script
- David A Case (Tue Apr 02 2013 - 04:46:36 PDT)
- dbaogen (Mon Apr 01 2013 - 19:05:30 PDT)
[AMBER] dihedral term for furan and thiophene molecules
- Karl N. Kirschner (Tue Apr 23 2013 - 04:31:29 PDT)
- Chang Woon Jang (Mon Apr 22 2013 - 08:21:29 PDT)
- David A Case (Mon Apr 22 2013 - 08:04:18 PDT)
- Chang Woon Jang (Mon Apr 22 2013 - 07:17:00 PDT)
[AMBER] distance restraint
- David A Case (Fri Apr 26 2013 - 17:22:29 PDT)
- Sangita Kachhap (Fri Apr 26 2013 - 10:54:38 PDT)
[AMBER] DNA basestep stacking energy/interaction energy
- David A Case (Tue Apr 30 2013 - 06:20:49 PDT)
- BERGY (Tue Apr 30 2013 - 03:27:03 PDT)
[AMBER] Error in lmod minimization parallel test
- Miguel Ortiz Lombardía (Mon Apr 08 2013 - 01:10:12 PDT)
- case (Sun Apr 07 2013 - 05:57:41 PDT)
- Miguel Ortiz Lombardía (Sat Apr 06 2013 - 06:31:21 PDT)
[AMBER] error in perl script (mm_pbsa.pl) for binding energy
- Jason Swails (Mon Apr 01 2013 - 05:09:25 PDT)
- kureeckal ramesh (Mon Apr 01 2013 - 02:42:09 PDT)
[AMBER] Error: A residue defined as a "fast 3-point water" is not defined by a triangle of three bonds using CHARMM 27 FF converted by CHAMBER program
- dbaogen (Sat Apr 13 2013 - 23:17:09 PDT)
- David A Case (Fri Apr 12 2013 - 04:49:01 PDT)
- dbaogen (Fri Apr 12 2013 - 03:23:44 PDT)
- Jason Swails (Thu Apr 11 2013 - 23:07:52 PDT)
- dbaogen (Wed Apr 10 2013 - 20:37:00 PDT)
[AMBER] Extra Points support in pmemd.cuda.MPI
- Thomas Evangelidis (Wed Apr 10 2013 - 13:47:52 PDT)
- Ross Walker (Wed Apr 10 2013 - 06:39:58 PDT)
- Jason Swails (Wed Apr 10 2013 - 06:27:41 PDT)
- Thomas Evangelidis (Wed Apr 10 2013 - 06:09:56 PDT)
- Jason Swails (Wed Apr 10 2013 - 05:30:18 PDT)
- Thomas Evangelidis (Wed Apr 10 2013 - 03:10:51 PDT)
[AMBER] ff atom types
- FyD (Fri Apr 12 2013 - 06:46:00 PDT)
- Urszula Uciechowska (Fri Apr 12 2013 - 06:12:36 PDT)
[AMBER] Fortran error while runnig
- David A Case (Wed Apr 17 2013 - 00:34:14 PDT)
- javier alejandro rendon carrillo (Tue Apr 16 2013 - 22:00:03 PDT)
[AMBER] Fwd: Accelerated Molecular Dynamics
- Diego Javier Alonso de Armiño (Sat Apr 06 2013 - 13:40:18 PDT)
[AMBER] Fwd: Analysis of side-chain conformational changes
- anu chandra (Thu Apr 04 2013 - 05:04:53 PDT)
[AMBER] Fwd: Input file for NVT simulation
- kurisaki (Mon Apr 22 2013 - 00:59:49 PDT)
- Vaibhav Dixit (Mon Apr 22 2013 - 00:46:53 PDT)
[AMBER] Fwd: Problems with tleap and popc membrane with protein
- Fabrício Bracht (Thu Apr 18 2013 - 11:19:56 PDT)
- Igor Marques (Thu Apr 18 2013 - 06:36:43 PDT)
- Benjamin D Madej (Wed Apr 17 2013 - 16:48:09 PDT)
- Fabrício Bracht (Wed Apr 17 2013 - 10:40:54 PDT)
- manikanthan bhavaraju (Tue Apr 16 2013 - 20:26:32 PDT)
- Fabrício Bracht (Tue Apr 16 2013 - 19:16:01 PDT)
[AMBER] Fwd: xleap problem
- suresh satpati (Sun Apr 07 2013 - 22:52:40 PDT)
[AMBER] gaff support for iron?
- David A Case (Thu Apr 18 2013 - 06:14:25 PDT)
- Jonathan Saboury (Thu Apr 18 2013 - 00:51:17 PDT)
[AMBER] GAFFlipid forcefield
- Dickson, Callum (Mon Apr 08 2013 - 05:02:30 PDT)
- marawan hussain (Sun Apr 07 2013 - 20:49:44 PDT)
[AMBER] GAFFLipid parameters
- Covington, Cody Lance (Wed Apr 17 2013 - 11:45:14 PDT)
[AMBER] GAFFlipid using custom lipids
- Benjamin D Madej (Tue Apr 16 2013 - 12:11:30 PDT)
- Covington, Cody Lance (Mon Apr 15 2013 - 18:02:12 PDT)
- Benjamin D Madej (Mon Apr 15 2013 - 15:00:00 PDT)
- Covington, Cody Lance (Mon Apr 15 2013 - 12:52:03 PDT)
- Benjamin D Madej (Mon Apr 15 2013 - 12:15:30 PDT)
- Ganesh Kamath (Mon Apr 15 2013 - 11:32:21 PDT)
- Covington, Cody Lance (Mon Apr 15 2013 - 11:23:27 PDT)
[AMBER] GPU job scheduling: looking for recommendations and experiences
- Jan-Philip Gehrcke (Fri Apr 05 2013 - 07:35:41 PDT)
[AMBER] Gradually reduce the restraint within one step
- crazylyf.126.com (Sat Apr 27 2013 - 17:27:07 PDT)
- David A Case (Sat Apr 27 2013 - 03:57:13 PDT)
- crazylyf.126.com (Fri Apr 26 2013 - 21:29:53 PDT)
- Jian Yin (Fri Apr 26 2013 - 21:08:50 PDT)
- crazylyf.126.com (Fri Apr 26 2013 - 20:40:51 PDT)
- Jian Yin (Fri Apr 26 2013 - 20:24:56 PDT)
- crazylyf.126.com (Fri Apr 26 2013 - 17:51:32 PDT)
- David A Case (Fri Apr 26 2013 - 12:08:33 PDT)
- crazylyf (Thu Apr 25 2013 - 20:28:45 PDT)
[AMBER] hbond print option equivalent in cpptraj from AmberTools13?
- miguel (Sun Apr 28 2013 - 00:48:07 PDT)
- Daniel Roe (Sat Apr 27 2013 - 10:01:42 PDT)
- miguel (Sat Apr 27 2013 - 08:01:54 PDT)
[AMBER] Help with GB-OBC calculations
- Carlos Simmerling (Tue Apr 02 2013 - 04:38:56 PDT)
- Kamakshi (Tue Apr 02 2013 - 04:34:06 PDT)
[AMBER] how to get force information through MD run
- David A Case (Sat Apr 27 2013 - 04:02:38 PDT)
- kurisaki (Sat Apr 27 2013 - 01:06:54 PDT)
[AMBER] How to modifie "runmd.f" to calculate force from obtained MD trajectory?
- kurisaki (Sun Apr 07 2013 - 03:39:03 PDT)
- kurisaki (Sun Apr 07 2013 - 01:22:59 PDT)
- kurisaki (Sat Apr 06 2013 - 20:46:01 PDT)
- Jason Swails (Fri Apr 05 2013 - 20:33:54 PDT)
- kurisaki (Fri Apr 05 2013 - 18:50:40 PDT)
[AMBER] Hydration Free Energy by TI
- Kepa K. Burusco (Tue Apr 23 2013 - 09:33:54 PDT)
- steinbrt.rci.rutgers.edu (Tue Apr 23 2013 - 04:45:40 PDT)
- Kepa K. Burusco (Mon Apr 15 2013 - 05:09:45 PDT)
[AMBER] ig=-1 in NVE simulation
- Ross Walker (Tue Apr 23 2013 - 23:33:10 PDT)
- Subrata Paul (Tue Apr 23 2013 - 23:02:11 PDT)
[AMBER] implicit solvation with periodic boundary
- Syed Tarique Moin (Mon Apr 08 2013 - 16:32:59 PDT)
- Carlos Simmerling (Mon Apr 08 2013 - 14:39:17 PDT)
- Syed Tarique Moin (Mon Apr 08 2013 - 14:27:35 PDT)
- Carlos Simmerling (Mon Apr 08 2013 - 13:28:20 PDT)
- Jason Swails (Mon Apr 08 2013 - 13:10:55 PDT)
- Ray Luo (Mon Apr 08 2013 - 09:57:43 PDT)
- Syed Tarique Moin (Mon Apr 08 2013 - 09:17:32 PDT)
- Nhai (Mon Apr 08 2013 - 08:50:42 PDT)
- Syed Tarique Moin (Mon Apr 08 2013 - 08:39:37 PDT)
[AMBER] improper Dihedral Specification
- Covington, Cody Lance (Tue Apr 30 2013 - 13:06:35 PDT)
[AMBER] Input file for NVT simulation
- Brian Radak (Mon Apr 22 2013 - 05:51:22 PDT)
- Vaibhav Dixit (Mon Apr 22 2013 - 00:43:16 PDT)
[AMBER] Is SHAKE necessary in running an MD?V
- Adrian Roitberg (Tue Apr 02 2013 - 05:48:48 PDT)
- Alan (Tue Apr 02 2013 - 05:23:27 PDT)
- Gerald Monard (Tue Apr 02 2013 - 00:30:34 PDT)
- Alan (Mon Apr 01 2013 - 23:12:42 PDT)
- Gerald Monard (Mon Apr 01 2013 - 03:08:06 PDT)
- Alan (Mon Apr 01 2013 - 01:29:36 PDT)
[AMBER] Is there a trick to fix a poor structural feature?
- Jonathan Gough (Sat Apr 27 2013 - 17:39:08 PDT)
- Symon Gathiaka (Thu Apr 25 2013 - 08:04:22 PDT)
- Thomas Evangelidis (Wed Apr 24 2013 - 23:02:23 PDT)
- Bill Ross (Wed Apr 24 2013 - 21:40:14 PDT)
- tec3.utah.edu (Wed Apr 24 2013 - 19:51:23 PDT)
- Jonathan Gough (Wed Apr 24 2013 - 14:13:00 PDT)
- Jonathan Gough (Wed Apr 24 2013 - 13:32:21 PDT)
- David A Case (Wed Apr 24 2013 - 11:20:21 PDT)
- Jonathan Gough (Wed Apr 24 2013 - 10:54:18 PDT)
- Bill Ross (Tue Apr 23 2013 - 21:26:26 PDT)
- Jason Swails (Tue Apr 23 2013 - 18:01:54 PDT)
- Jonathan Gough (Tue Apr 23 2013 - 11:47:19 PDT)
[AMBER] large difference of nonpolar solvation free energy using MMPBSA.py in AmberTools1.5 or AmberTools12
- Jason Swails (Tue Apr 09 2013 - 18:45:45 PDT)
- dbaogen (Tue Apr 09 2013 - 18:29:23 PDT)
- Jason Swails (Tue Apr 09 2013 - 14:56:17 PDT)
- dbaogen (Tue Apr 09 2013 - 00:24:58 PDT)
[AMBER] large Standard Deviation of binding free energy using QM/MM-GBSA method in Amber 11 with AmberTools 12
- Jason Swails (Thu Apr 11 2013 - 07:28:11 PDT)
- dbaogen (Thu Apr 11 2013 - 05:15:31 PDT)
[AMBER] Leap: Setting the bounding box manually
- Jason Swails (Sun Apr 21 2013 - 20:05:19 PDT)
- Anselm Horn (Sun Apr 21 2013 - 09:04:06 PDT)
[AMBER] Ligand-Receptor complex MD - ligand doesn't appear?
- Sebastian Petrik (Wed Apr 10 2013 - 18:39:20 PDT)
- steinbrt.rci.rutgers.edu (Wed Apr 10 2013 - 00:53:34 PDT)
- Sebastian Petrik (Tue Apr 09 2013 - 16:43:24 PDT)
- Julio Dominguez (Tue Apr 09 2013 - 13:13:58 PDT)
- steinbrt.rci.rutgers.edu (Tue Apr 09 2013 - 00:45:38 PDT)
- Sebastian Petrik (Mon Apr 08 2013 - 18:26:30 PDT)
[AMBER] LINMIN FAILURE in amber12
- Soumya Lipsa Rath (Mon Apr 08 2013 - 05:16:30 PDT)
- David A Case (Mon Apr 08 2013 - 04:48:50 PDT)
- Soumya Lipsa Rath (Sun Apr 07 2013 - 23:00:57 PDT)
[AMBER] list of (dihedral and angle) parameters (GAFF)
- Daniel Roe (Fri Apr 26 2013 - 09:42:30 PDT)
- Ilyas Yildirim (Fri Apr 26 2013 - 09:41:48 PDT)
- Vedat Durmaz (Fri Apr 26 2013 - 09:14:24 PDT)
[AMBER] MD Simulation of Heavy Metal(Bi or Sb) compound molecule
- FyD (Thu Apr 04 2013 - 02:36:15 PDT)
- Yasuo Kurita (Thu Apr 04 2013 - 02:12:34 PDT)
[AMBER] meaning of values for dihedrals of a chromophore
- Anna Marabotti (Thu Apr 04 2013 - 03:20:15 PDT)
[AMBER] Measure (and print to file) distances on the fly in pmemd.cuda
- Diego Javier Alonso de Armiño (Sun Apr 07 2013 - 09:33:11 PDT)
- Jason Swails (Sun Apr 07 2013 - 05:56:39 PDT)
- Diego Javier Alonso de Armiño (Sat Apr 06 2013 - 13:38:11 PDT)
[AMBER] minimize problem
- case (Sun Apr 07 2013 - 06:02:00 PDT)
- 涂志萍 (Sat Apr 06 2013 - 20:12:45 PDT)
[AMBER] MMPBSA failed
- Albert (Wed Apr 03 2013 - 07:56:53 PDT)
- Albert (Wed Apr 03 2013 - 07:40:25 PDT)
- Jason Swails (Wed Apr 03 2013 - 07:30:19 PDT)
- Bill Miller III (Wed Apr 03 2013 - 07:26:20 PDT)
- Albert (Wed Apr 03 2013 - 07:08:49 PDT)
- Bill Miller III (Wed Apr 03 2013 - 07:00:28 PDT)
- Albert (Wed Apr 03 2013 - 06:50:15 PDT)
- Jan-Philip Gehrcke (Wed Apr 03 2013 - 05:22:53 PDT)
- Jason Swails (Wed Apr 03 2013 - 04:53:18 PDT)
- Albert (Wed Apr 03 2013 - 02:05:47 PDT)
- Jan-Philip Gehrcke (Wed Apr 03 2013 - 01:30:59 PDT)
- Albert (Wed Apr 03 2013 - 00:12:10 PDT)
[AMBER] MMPBSA result interpretation helppppp
- Jason Swails (Tue Apr 23 2013 - 05:12:43 PDT)
- Catein Catherine (Thu Apr 18 2013 - 23:07:25 PDT)
[AMBER] MMPBSA.py: ECAVITY / ENPOLAR discrepancy
- Jan-Philip Gehrcke (Tue Apr 30 2013 - 06:37:27 PDT)
- Jason Swails (Tue Apr 30 2013 - 06:32:20 PDT)
- Jan-Philip Gehrcke (Tue Apr 30 2013 - 06:05:09 PDT)
- Jason Swails (Tue Apr 30 2013 - 05:07:27 PDT)
- Jan-Philip Gehrcke (Tue Apr 30 2013 - 03:51:27 PDT)
- Jan-Philip Gehrcke (Tue Apr 30 2013 - 03:06:56 PDT)
[AMBER] mopac.sh file missing in amber12/bin directory
- Jason Swails (Thu Apr 11 2013 - 22:59:44 PDT)
- parul sharma (Thu Apr 11 2013 - 22:20:12 PDT)
[AMBER] need a box
- Adrian Roitberg (Tue Apr 02 2013 - 08:09:27 PDT)
[AMBER] Newbie solvent question
- Jonathan Gough (Tue Apr 16 2013 - 12:34:48 PDT)
- Jason Swails (Tue Apr 16 2013 - 12:31:09 PDT)
- Brian Radak (Tue Apr 16 2013 - 12:19:13 PDT)
- Jonathan Gough (Tue Apr 16 2013 - 10:57:55 PDT)
[AMBER] NPT ensemble hydrogen bond calculation
- Daniel Roe (Mon Apr 15 2013 - 07:21:25 PDT)
- Binwu Zhao (Fri Apr 12 2013 - 21:20:54 PDT)
[AMBER] NPT ensemble hydrogen bond calculation (Binwu Zhao)
- Daniel Roe (Tue Apr 16 2013 - 10:52:46 PDT)
- Binwu Zhao (Tue Apr 16 2013 - 10:46:00 PDT)
[AMBER] on the usage of Antechamber for the ligand parametrisation
- James Starlight (Wed Apr 10 2013 - 00:18:26 PDT)
- Astrid Maaß (Wed Apr 10 2013 - 00:06:45 PDT)
- FyD (Tue Apr 09 2013 - 23:13:42 PDT)
- James Starlight (Tue Apr 09 2013 - 22:33:39 PDT)
- FyD (Tue Apr 09 2013 - 03:12:23 PDT)
- James Starlight (Mon Apr 08 2013 - 04:52:31 PDT)
- James Starlight (Mon Apr 08 2013 - 04:48:40 PDT)
[AMBER] on the ussage of mopac with Antechamber
- James Starlight (Tue Apr 16 2013 - 08:00:53 PDT)
- Jason Swails (Tue Apr 16 2013 - 04:51:59 PDT)
- David A Case (Tue Apr 16 2013 - 04:51:32 PDT)
- James Starlight (Mon Apr 15 2013 - 21:44:20 PDT)
- David A Case (Mon Apr 15 2013 - 10:29:59 PDT)
- James Starlight (Fri Apr 12 2013 - 22:58:56 PDT)
[AMBER] Out of Box in PMEMD
- David A Case (Sat Apr 06 2013 - 06:10:20 PDT)
- journal.update (Fri Apr 05 2013 - 22:03:21 PDT)
- Daniel Roe (Fri Apr 05 2013 - 09:15:07 PDT)
- journal.update (Thu Apr 04 2013 - 23:38:41 PDT)
[AMBER] Palladium complex parametrization in antechamber
- Alexey Zeifman (Mon Apr 29 2013 - 04:58:02 PDT)
- David A Case (Mon Apr 29 2013 - 04:53:16 PDT)
- Alexey Zeifman (Sun Apr 28 2013 - 23:43:14 PDT)
[AMBER] Paper detailing GPU Simulations Compared to CPU code
- Ross Walker (Mon Apr 29 2013 - 09:19:46 PDT)
- ET (Mon Apr 29 2013 - 08:15:02 PDT)
[AMBER] parameter problem for NVE/NPE or NPV ensemble
- David A Case (Thu Apr 04 2013 - 07:00:27 PDT)
- nguyentb.bii.a-star.edu.sg (Thu Apr 04 2013 - 05:51:51 PDT)
- David A Case (Thu Apr 04 2013 - 04:49:38 PDT)
- Jason Swails (Thu Apr 04 2013 - 04:34:50 PDT)
- nguyentb.bii.a-star.edu.sg (Thu Apr 04 2013 - 01:36:14 PDT)
[AMBER] parameters for single amino acid MD
- David A Case (Mon Apr 22 2013 - 08:03:04 PDT)
- Rilei Yu (Mon Apr 22 2013 - 05:49:47 PDT)
[AMBER] paramfit question
- Robin Betz (Fri Apr 26 2013 - 17:16:29 PDT)
- Covington, Cody Lance (Fri Apr 26 2013 - 15:20:08 PDT)
[AMBER] paramfit questions
- Karl N. Kirschner (Fri Apr 19 2013 - 00:26:09 PDT)
- Robin Betz (Thu Apr 18 2013 - 16:53:02 PDT)
- Covington, Cody Lance (Thu Apr 18 2013 - 10:42:24 PDT)
[AMBER] pb_read.F90: minor issue // AmberTools . GitHub?
- Jan-Philip Gehrcke (Tue Apr 30 2013 - 06:27:51 PDT)
[AMBER] PBSA focusing
- Ray Luo, Ph.D. (Tue Apr 16 2013 - 11:27:51 PDT)
- Jesper Sørensen (Tue Apr 16 2013 - 10:33:13 PDT)
- Ray Luo, Ph.D. (Mon Apr 15 2013 - 16:54:43 PDT)
- Jesper Sørensen (Mon Apr 15 2013 - 16:03:50 PDT)
- Ray Luo, Ph.D. (Mon Apr 15 2013 - 14:38:48 PDT)
- Jesper Sørensen (Mon Apr 15 2013 - 14:06:09 PDT)
[AMBER] Plotting heat maps in AMBER aMD simualtions
- Levi Pierce (Thu Apr 18 2013 - 07:36:12 PDT)
- Jason Swails (Thu Apr 18 2013 - 05:04:15 PDT)
- Levi Pierce (Wed Apr 17 2013 - 07:52:38 PDT)
- Neha Gandhi (Tue Apr 16 2013 - 22:28:43 PDT)
- Daniel Roe (Tue Apr 16 2013 - 08:38:34 PDT)
- Jason Swails (Tue Apr 16 2013 - 08:10:05 PDT)
- Neha Gandhi (Tue Apr 16 2013 - 00:19:22 PDT)
[AMBER] pmemd.cuda.MPI with npt
- Ross Walker (Thu Apr 18 2013 - 23:35:00 PDT)
- HIMANSHU JOSHI (Thu Apr 18 2013 - 23:01:05 PDT)
- HIMANSHU JOSHI (Wed Apr 17 2013 - 22:33:11 PDT)
- HIMANSHU JOSHI (Wed Apr 17 2013 - 22:24:07 PDT)
- Scott Le Grand (Wed Apr 17 2013 - 17:56:42 PDT)
- Gustavo Seabra (Wed Apr 17 2013 - 11:30:40 PDT)
- Adrian Roitberg (Wed Apr 17 2013 - 11:26:00 PDT)
- HIMANSHU JOSHI (Wed Apr 17 2013 - 11:24:37 PDT)
- Gustavo Seabra (Wed Apr 17 2013 - 11:10:43 PDT)
- HIMANSHU JOSHI (Wed Apr 17 2013 - 11:03:07 PDT)
[AMBER] pmemd: time-dependent distance restraint (as with jar=1) + torsional restraints
- Jan-Philip Gehrcke (Thu Apr 25 2013 - 07:35:12 PDT)
- Jan-Philip Gehrcke (Thu Apr 25 2013 - 05:22:58 PDT)
- Jan-Philip Gehrcke (Thu Apr 25 2013 - 05:08:06 PDT)
[AMBER] Prepare PRMTOP file for off-SHAKE simulation
- kurisaki (Sun Apr 28 2013 - 21:14:20 PDT)
- kurisaki (Sun Apr 28 2013 - 20:18:56 PDT)
[AMBER] Print pressure tensor components of NVT ensemble by running pmemd.cuda.MPI
- Ross Walker (Wed Apr 17 2013 - 16:48:57 PDT)
- Wei Lin (Wed Apr 17 2013 - 16:42:18 PDT)
- Wei Lin (Wed Apr 17 2013 - 16:31:02 PDT)
[AMBER] Problem compiling AMBER12 sander.MPI with gnu
- Marc van der Kamp (Thu Apr 11 2013 - 13:39:14 PDT)
- Jason Swails (Thu Apr 11 2013 - 07:15:15 PDT)
- Marc van der Kamp (Thu Apr 11 2013 - 03:19:44 PDT)
[AMBER] problem in creating circular DNA using NAB
- David A Case (Wed Apr 17 2013 - 00:19:30 PDT)
- arnab bhattacharya (Tue Apr 16 2013 - 05:30:53 PDT)
- David A Case (Mon Apr 15 2013 - 10:58:48 PDT)
- arnab bhattacharya (Mon Apr 15 2013 - 04:10:33 PDT)
[AMBER] problem in creating circular DNA with NAB
- arnab bhattacharya (Mon Apr 15 2013 - 05:00:18 PDT)
[AMBER] problem in loading 5'terminal phosphate group of tRNA
- FyD (Fri Apr 12 2013 - 07:03:34 PDT)
- N Nandi (Thu Apr 11 2013 - 22:57:07 PDT)
- FyD (Mon Apr 08 2013 - 05:33:23 PDT)
- N Nandi (Mon Apr 08 2013 - 04:14:58 PDT)
- FyD (Mon Apr 08 2013 - 00:48:41 PDT)
- N Nandi (Sun Apr 07 2013 - 22:18:29 PDT)
- FyD (Sat Apr 06 2013 - 05:51:08 PDT)
- N Nandi (Fri Apr 05 2013 - 09:49:22 PDT)
[AMBER] Problem in parameter file generation
- Kshatresh Dutta Dubey (Sun Apr 28 2013 - 00:23:31 PDT)
- Jason Swails (Sat Apr 27 2013 - 21:58:54 PDT)
- Kshatresh Dutta Dubey (Sat Apr 27 2013 - 14:28:23 PDT)
- Bill Ross (Sat Apr 27 2013 - 14:03:09 PDT)
- Kshatresh Dutta Dubey (Sat Apr 27 2013 - 13:41:34 PDT)
[AMBER] Problem with cluster analysis in ptraj
- Daniel Roe (Tue Apr 23 2013 - 07:18:22 PDT)
- nicolai petelski (Mon Apr 22 2013 - 18:12:41 PDT)
[AMBER] Problem with folding simulation
- Jason Swails (Tue Apr 09 2013 - 19:51:28 PDT)
- Carlos Simmerling (Tue Apr 09 2013 - 19:41:46 PDT)
- moitrayee.mbu.iisc.ernet.in (Tue Apr 09 2013 - 19:07:43 PDT)
[AMBER] Problem with order parameter calculation in PTRAJ
- anu chandra (Tue Apr 09 2013 - 22:55:55 PDT)
- anu chandra (Tue Apr 09 2013 - 22:41:50 PDT)
- anu chandra (Tue Apr 09 2013 - 22:04:27 PDT)
- Daniel Roe (Tue Apr 09 2013 - 07:58:45 PDT)
- anu chandra (Mon Apr 08 2013 - 23:40:45 PDT)
- Daniel Roe (Mon Apr 08 2013 - 10:25:45 PDT)
- anu chandra (Mon Apr 08 2013 - 01:56:36 PDT)
- anu chandra (Fri Apr 05 2013 - 22:48:33 PDT)
- Daniel Roe (Fri Apr 05 2013 - 08:38:36 PDT)
- anu chandra (Fri Apr 05 2013 - 00:16:00 PDT)
[AMBER] Problem with the amber12 compilation
- James Starlight (Mon Apr 08 2013 - 03:50:04 PDT)
- Jan-Philip Gehrcke (Mon Apr 08 2013 - 03:34:05 PDT)
- James Starlight (Mon Apr 08 2013 - 02:36:23 PDT)
[AMBER] problems with explicit solvent MD
- Jason Swails (Fri Apr 19 2013 - 03:50:11 PDT)
- Niels Geudens (Fri Apr 19 2013 - 01:09:45 PDT)
[AMBER] Problems with MMPBSA: mmphsa_py_energy could not be found
- Jason Swails (Mon Apr 01 2013 - 05:07:22 PDT)
- Tommy Yap (Mon Apr 01 2013 - 00:18:54 PDT)
[AMBER] Problems with tleap and popc membrane with protein
- manikanthan bhavaraju (Tue Apr 16 2013 - 14:35:39 PDT)
- Fabrício Bracht (Tue Apr 16 2013 - 14:17:14 PDT)
[AMBER] protein-ligand docking
- David A Case (Sat Apr 20 2013 - 05:48:27 PDT)
- James Starlight (Fri Apr 19 2013 - 23:57:37 PDT)
[AMBER] Query about checking of convergence in REMD
- Daniel Roe (Fri Apr 26 2013 - 09:47:38 PDT)
- Carlos Simmerling (Fri Apr 26 2013 - 06:20:01 PDT)
- gargi borgohai (Fri Apr 26 2013 - 06:14:58 PDT)
[AMBER] Question for AMBER input files
- Daniel Roe (Thu Apr 25 2013 - 07:33:55 PDT)
- 陶晓芳 (Wed Apr 24 2013 - 18:19:01 PDT)
[AMBER] Question for AMBER input files (inpcrd file)
- 陶晓芳 (Wed Apr 24 2013 - 19:00:07 PDT)
[AMBER] RE : GAFFlipid using custom lipids
- ABEL Stephane 175950 (Mon Apr 15 2013 - 13:29:28 PDT)
[AMBER] Reducing positional restraint gradually
- Jan-Philip Gehrcke (Wed Apr 24 2013 - 01:46:24 PDT)
- David A Case (Tue Apr 23 2013 - 09:02:30 PDT)
- Jan-Philip Gehrcke (Tue Apr 23 2013 - 07:17:44 PDT)
- Jason Swails (Tue Apr 23 2013 - 07:05:06 PDT)
- Rahul Banerjee (Tue Apr 23 2013 - 06:32:14 PDT)
- Jan-Philip Gehrcke (Mon Apr 22 2013 - 14:11:07 PDT)
- Brian Radak (Mon Apr 22 2013 - 13:12:56 PDT)
- Rahul Banerjee (Mon Apr 22 2013 - 12:11:44 PDT)
[AMBER] Regarding Accelerated Molecular Dynamics
- Adam Zalewski (Fri Apr 05 2013 - 04:33:16 PDT)
[AMBER] Regarding MD run in vacuum
- Massimiliano Porrini (Wed Apr 03 2013 - 09:54:50 PDT)
- Jason Swails (Wed Apr 03 2013 - 06:53:28 PDT)
- Aron Broom (Wed Apr 03 2013 - 06:36:33 PDT)
- Gaurao Dhoke (Wed Apr 03 2013 - 03:26:57 PDT)
- steinbrt.rci.rutgers.edu (Wed Apr 03 2013 - 03:17:13 PDT)
- Gaurao Dhoke (Wed Apr 03 2013 - 01:56:21 PDT)
[AMBER] Release of AmberTools13
- David A Case (Mon Apr 22 2013 - 13:33:11 PDT)
[AMBER] RMD with selected NMR restraints
- David A Case (Fri Apr 26 2013 - 17:24:49 PDT)
- Krisztina Feher (Fri Apr 26 2013 - 06:32:40 PDT)
[AMBER] sander not installed
- Anna Bauß (Mon Apr 15 2013 - 01:34:48 PDT)
- Jonathan Saboury (Mon Apr 15 2013 - 00:50:04 PDT)
[AMBER] Sander/PMEMD doesn't understand line - corrupted RST output?
- Sebastian Petrik (Sun Apr 28 2013 - 18:49:56 PDT)
- Jason Swails (Sun Apr 28 2013 - 17:59:48 PDT)
- Sebastian Petrik (Sun Apr 28 2013 - 17:17:26 PDT)
[AMBER] segmentation fault in tleap
- Jonathan Gough (Sun Apr 21 2013 - 21:39:32 PDT)
- Robin Betz (Sun Apr 21 2013 - 21:05:33 PDT)
- Jonathan Gough (Sun Apr 21 2013 - 20:09:37 PDT)
[AMBER] Solute concentration
- Covington, Cody Lance (Mon Apr 15 2013 - 17:10:39 PDT)
- waleed zalloum (Mon Apr 15 2013 - 12:45:33 PDT)
[AMBER] The latest topology file format.
- Takeshi Baba (Wed Apr 10 2013 - 16:38:49 PDT)
- Daniel Roe (Tue Apr 09 2013 - 07:54:25 PDT)
- Takeshi Baba (Tue Apr 09 2013 - 05:56:58 PDT)
[AMBER] the role of surface charge
- David A Case (Fri Apr 26 2013 - 17:28:28 PDT)
- Sun (Fri Apr 26 2013 - 01:13:53 PDT)
[AMBER] Time step of 5 fs??
- Gerald Monard (Wed Apr 03 2013 - 01:07:18 PDT)
- steinbrt.rci.rutgers.edu (Wed Apr 03 2013 - 00:43:17 PDT)
- HM (Tue Apr 02 2013 - 23:59:55 PDT)
[AMBER] tleap cannot create topology and coordinate files
- David A Case (Wed Apr 17 2013 - 06:44:11 PDT)
- javier alejandro rendon carrillo (Mon Apr 15 2013 - 14:22:52 PDT)
[AMBER] tleap problem
- steinbrt.rci.rutgers.edu (Mon Apr 08 2013 - 08:07:06 PDT)
- Odin Zeus (Mon Apr 08 2013 - 07:54:46 PDT)
[AMBER] Tool to parameterize the ligand molecules
- Jagur Lambix (Fri Apr 12 2013 - 08:05:53 PDT)
- Jason Swails (Thu Apr 11 2013 - 16:45:52 PDT)
- Jagur Lambix (Thu Apr 11 2013 - 16:18:14 PDT)
[AMBER] Using 3D-RISM to compute solvation free energy
- Tyler Luchko (Sat Apr 20 2013 - 15:23:57 PDT)
- Abhishek Mukhopadhyay (Sat Apr 20 2013 - 15:00:37 PDT)
- tluchko (Fri Apr 19 2013 - 15:34:19 PDT)
- Abhishek Mukhopadhyay (Fri Apr 19 2013 - 15:10:14 PDT)
- tluchko (Fri Apr 19 2013 - 14:02:06 PDT)
- Abhishek Mukhopadhyay (Fri Apr 19 2013 - 13:36:05 PDT)
[AMBER] Using MTKPP to turn a nonstandard organometallic compound in pdb format into AMBER inpcrd and prmtop files
- FyD (Sun Apr 21 2013 - 07:42:29 PDT)
- David A Case (Sat Apr 20 2013 - 05:43:39 PDT)
- Jonathan Saboury (Fri Apr 19 2013 - 13:50:37 PDT)
[AMBER] vecs file
- Deák Robert (Thu Apr 04 2013 - 05:38:30 PDT)
- David A Case (Wed Apr 03 2013 - 08:20:05 PDT)
- Rasha Alqus (Wed Apr 03 2013 - 07:51:22 PDT)
- Deák Robert (Wed Apr 03 2013 - 06:11:25 PDT)
- Rasha Alqus (Wed Apr 03 2013 - 05:58:22 PDT)
- Deák Robert (Wed Apr 03 2013 - 05:44:43 PDT)
- Rasha Alqus (Wed Apr 03 2013 - 05:26:12 PDT)
[AMBER] VMD shows an atom stretched waaaay out
- Jonathan Gough (Mon Apr 22 2013 - 14:27:57 PDT)
- Daniel Roe (Mon Apr 22 2013 - 14:20:24 PDT)
- Jonathan Gough (Mon Apr 22 2013 - 12:50:05 PDT)
- Hai Nguyen (Mon Apr 22 2013 - 12:15:02 PDT)
- Jonathan Gough (Mon Apr 22 2013 - 08:50:10 PDT)
[AMBER] where does sander open the output files?
- kurisaki (Sun Apr 07 2013 - 06:00:49 PDT)
- kurisaki (Sun Apr 07 2013 - 05:59:23 PDT)
- Jason Swails (Sun Apr 07 2013 - 05:43:29 PDT)
- kurisaki (Sun Apr 07 2013 - 01:20:48 PDT)
[AMBER] Whirling ssDNA like a helicopter (Movie attached)
- David A Case (Tue Apr 16 2013 - 04:47:35 PDT)
- Hoshin Kim (Mon Apr 15 2013 - 15:23:05 PDT)
[AMBER] Wolf2Pack Parameterization Tool
- Karl N. Kirschner (Tue Apr 16 2013 - 02:27:11 PDT)
[AMBER] xleap error - Created a new atom named: P within residue: .R<DG5 478>
- Daniel Roe (Tue Apr 09 2013 - 08:00:42 PDT)
- suresh satpati (Tue Apr 09 2013 - 01:37:39 PDT)
[AMBER] Zero vdW parametes for HO in Amber
- Jason Swails (Wed Apr 10 2013 - 21:12:24 PDT)
- Yong Duan (Wed Apr 10 2013 - 19:27:19 PDT)
- Lachele Foley (Wed Apr 10 2013 - 17:22:03 PDT)
- Bill Ross (Wed Apr 10 2013 - 16:41:27 PDT)
- Morteza Chehel Amirani (Wed Apr 10 2013 - 15:55:40 PDT)
Ligand-Receptor complex MD - ligand doesn't > appear?
- steinbrt.rci.rutgers.edu (Thu Apr 11 2013 - 02:01:52 PDT)
- Sebastian Petrik (Wed Apr 10 2013 - 20:14:24 PDT)
- Julio Dominguez (Wed Apr 10 2013 - 13:39:18 PDT)
No subject
- Wholly Peach (Wed Apr 03 2013 - 06:39:22 PDT)

Amber Archive Apr 2013 by subject