[AMBER] improper Dihedral Specification

From: Covington, Cody Lance <cody.l.covington.Vanderbilt.Edu>
Date: Tue, 30 Apr 2013 20:06:35 +0000

Hello

Concerning improper dihedrals to preserve chirality.
If I am using improper dihedrals in this way, then the atoms that make the angle are not necessarily bonded.
I have read that LEaP will assign them based on the basis of the atoms being bonded to one another.
Is there a way around this?

Thanks
Cody
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Received on Tue Apr 30 2013 - 13:30:03 PDT
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