Re: [AMBER] list of (dihedral and angle) parameters (GAFF)

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Fri, 26 Apr 2013 10:42:30 -0600

Hi,

All parameters are stored in the $AMBERHOME/dat/leap/ folder in the
subfolder parm. I think the specific file you want (for GAFF) is:

$AMBERHOME/dat/leap/parm/gaff.dat

-Dan

On Fri, Apr 26, 2013 at 10:14 AM, Vedat Durmaz <durmaz.zib.de> wrote:
> hi folks,
>
> i've been using many molecules parameterized with antechamber (acpype)
> with gromacs simulations. what i need now is a list of torsional and
> angle parameters for certain sets of atom types.
>
> e. g. dihedral parameters for
>
> c c3 c3 hc
>
>
> are such files/lists available in the antechamber installation path or
> somewhere in the internet?
>
> please, don't kill me for asking (probably) stupid questions!
>
> have a nice weekend
> vedat
>
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber



-- 
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-9119 (Fax)
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Apr 26 2013 - 10:00:03 PDT
Custom Search