On Tue, Apr 30, 2013, BERGY wrote:
> I have generated DNA base steps wit different conformations.( step
> parameter value combination (twist,roll and slide values) in PDB format..
> The hbond occur between the base in the base pairs
> and stacking occurs between base pairs. additionally the vdw and other
> non-bonded interactions occurs. i would like to calculate these interaction
> and potential energy.
See if the analysis tools at w3dna.rutgers.edu do what you want.
...dac
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Received on Tue Apr 30 2013 - 06:30:03 PDT
