Re: [AMBER] Plotting heat maps in AMBER aMD simualtions

From: Jason Swails <jason.swails.gmail.com>
Date: Thu, 18 Apr 2013 08:04:15 -0400

On Wed, Apr 17, 2013 at 10:52 AM, Levi Pierce <levipierce.gmail.com> wrote:

> I have had a bunch of requests for this and I basically send along my
> Matlab script that I use to do this but it probably makes sense to just add
> this in to cpptraj...Jason what do you think?
>

It sounds like a good place for it to end up ultimately, but it won't make
it in before the next AT release. It would probably help to have a
tutorial explaining how to run and reweight AMD simulations (in addition to
a file describing the amd.log file with units), and putting the script on
the tutorial would be a great help as well.

All the best,
Jason

-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Thu Apr 18 2013 - 05:30:03 PDT
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