Amber Archive Jun 2008: by subject

AMBER 10 failure to run in UBUNTU
- Peseckis, Steven M. (Sun Jun 29 2008 - 17:13:38 PDT)
AMBER:
- David A. Case (Fri Jun 27 2008 - 11:55:04 PDT)
- Peseckis, Steven M. (Thu Jun 26 2008 - 08:54:05 PDT)
AMBER: "Dumping RAW 2D RMS data is not yet implemented"?
- Steve Spronk (Tue Jun 17 2008 - 08:54:04 PDT)
- Jianyin Shao (Tue Jun 17 2008 - 08:36:01 PDT)
- David A. Case (Tue Jun 17 2008 - 08:18:08 PDT)
- Steve Spronk (Tue Jun 17 2008 - 07:00:08 PDT)
AMBER: (no subject)
- Robert Duke (Mon Jun 30 2008 - 09:43:11 PDT)
- fatima.chami.durham.ac.uk (Mon Jun 30 2008 - 09:26:23 PDT)
- Daniel B. Kaplan (Wed Jun 25 2008 - 19:23:43 PDT)
- Junmei Wang (Mon Jun 23 2008 - 08:01:39 PDT)
- Daniel B. Kaplan (Sun Jun 22 2008 - 16:46:17 PDT)
AMBER: 100 short MD runs within a single Sander script?
- Ross Walker (Fri Jun 06 2008 - 22:22:36 PDT)
- Sebastian Stolzenberg (Fri Jun 06 2008 - 21:55:37 PDT)
AMBER: 2D RMS plot
- Steve Spronk (Thu Jun 12 2008 - 05:42:41 PDT)
- Jianyin Shao (Wed Jun 11 2008 - 15:17:43 PDT)
- Steve Spronk (Wed Jun 11 2008 - 12:18:32 PDT)
AMBER: [Fwd: failure to load box parameters]
- David A. Case (Wed Jun 25 2008 - 12:09:28 PDT)
- Daniel Smith (Wed Jun 25 2008 - 11:30:18 PDT)
- David A. Case (Tue Jun 24 2008 - 08:14:51 PDT)
- Daniel Smith (Mon Jun 23 2008 - 14:26:22 PDT)
- David A. Case (Wed Jun 18 2008 - 22:35:53 PDT)
- Daniel Smith (Wed Jun 18 2008 - 20:58:10 PDT)
AMBER: [Fwd: segmentation fault in nmode]
- Guillaume Renvez (Mon Jun 23 2008 - 01:27:27 PDT)
- David A. Case (Thu Jun 19 2008 - 17:22:34 PDT)
- Guillaume Renvez (Tue Jun 17 2008 - 00:50:33 PDT)
- Guillaume Renvez (Tue Jun 17 2008 - 00:48:34 PDT)
- JAMES W CALDWELL (Mon Jun 16 2008 - 17:53:03 PDT)
- David A. Case (Mon Jun 16 2008 - 16:42:47 PDT)
- Guillaume Renvez (Mon Jun 16 2008 - 07:31:12 PDT)
AMBER: A problem of dihedral angle
- Harry (Yicun) Ni (Wed Jun 25 2008 - 12:42:09 PDT)
- Carlos Simmerling (Wed Jun 25 2008 - 08:53:16 PDT)
- Ross Walker (Wed Jun 25 2008 - 08:48:56 PDT)
- Harry (Yicun) Ni (Wed Jun 25 2008 - 08:31:24 PDT)
AMBER: A problem of installing Amber10
- Harry Ni (Fri Jun 06 2008 - 14:36:48 PDT)
- David A. Case (Fri Jun 06 2008 - 13:21:52 PDT)
- Harry Ni (Fri Jun 06 2008 - 12:00:19 PDT)
- David A. Case (Thu Jun 05 2008 - 12:13:16 PDT)
- Harry Ni (Thu Jun 05 2008 - 11:27:23 PDT)
- David A. Case (Thu Jun 05 2008 - 10:49:58 PDT)
- Yicun Ni (Thu Jun 05 2008 - 08:55:53 PDT)
AMBER: A-prime RNA input file
- 欧阳德方 (Tue Jun 24 2008 - 04:16:27 PDT)
AMBER: about gaff.dat in ambeTools 1.0
- Junmei Wang (Tue Jun 24 2008 - 06:37:09 PDT)
- Alan (Wed Jun 18 2008 - 07:44:02 PDT)
AMBER: about resp charges
- wanjian ding (Wed Jun 18 2008 - 13:43:35 PDT)
- FyD (Tue Jun 17 2008 - 05:58:03 PDT)
- WanJ Ding (Mon Jun 16 2008 - 12:44:55 PDT)
AMBER: Amber 10 timing
- Robert Duke (Fri Jun 20 2008 - 14:29:00 PDT)
- Ed Pate (Fri Jun 20 2008 - 10:08:37 PDT)
AMBER: amber installation on cluster
- Ross Walker (Wed Jun 04 2008 - 10:54:36 PDT)
- David A. Case (Wed Jun 04 2008 - 10:55:39 PDT)
- Pankaj R. Daga (Wed Jun 04 2008 - 10:27:57 PDT)
AMBER: amber10 compile gfortran question
- James W. Caldwell (Wed Jun 25 2008 - 12:11:58 PDT)
- David A. Case (Wed Jun 25 2008 - 12:03:54 PDT)
- James W. Caldwell (Wed Jun 25 2008 - 11:10:58 PDT)
AMBER: amber10 installation problem
- Ross Walker (Tue Jun 10 2008 - 15:04:51 PDT)
- Robert Duke (Tue Jun 10 2008 - 15:02:54 PDT)
- Ed Pate (Tue Jun 10 2008 - 13:59:47 PDT)
AMBER: amber10 make fails for static/parallel
- James W. Caldwell (Fri Jun 13 2008 - 15:50:19 PDT)
AMBER: amber10/dat/leap/cmd/README need update
- Vlad Cojocaru (Mon Jun 23 2008 - 08:12:29 PDT)
- Alan (Mon Jun 23 2008 - 07:59:21 PDT)
AMBER: Amber:unsubscribe amber
- sanket.deshmukh.ucd.ie (Thu Jun 26 2008 - 04:53:22 PDT)
AMBER: AmberTools 1.0 installation error: x86_64
- David A. Case (Fri Jun 20 2008 - 09:17:35 PDT)
- Matthew Danielson (Fri Jun 20 2008 - 08:44:21 PDT)
AMBER: anisotropic pressure scaling ntp=2
- David A. Case (Thu Jun 12 2008 - 08:13:52 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 12 2008 - 06:18:13 PDT)
AMBER: Antechamber and topology file
- David A. Case (Thu Jun 12 2008 - 09:03:50 PDT)
- TAEJIN KIM (Wed Jun 11 2008 - 16:05:14 PDT)
AMBER: Antechamber Question
- Junmei Wang (Tue Jun 24 2008 - 06:33:58 PDT)
- Daniel B. Kaplan (Mon Jun 23 2008 - 09:51:28 PDT)
AMBER: Antechamber/mopac am1-bcc charge
- FyD (Sun Jun 29 2008 - 06:18:15 PDT)
- Francesco Pietra (Sat Jun 28 2008 - 10:22:44 PDT)
- FyD (Sat Jun 28 2008 - 00:47:54 PDT)
- Francesco Pietra (Fri Jun 27 2008 - 15:02:21 PDT)
- Junmei Wang (Fri Jun 27 2008 - 08:35:23 PDT)
- FyD (Fri Jun 27 2008 - 02:07:45 PDT)
- Junmei Wang (Thu Jun 26 2008 - 15:25:32 PDT)
- FyD (Thu Jun 26 2008 - 13:53:20 PDT)
- Junmei Wang (Thu Jun 26 2008 - 11:27:10 PDT)
- Francesco Pietra (Thu Jun 26 2008 - 10:29:12 PDT)
- Junmei Wang (Thu Jun 26 2008 - 07:33:44 PDT)
- Dong Xu (Wed Jun 25 2008 - 23:21:03 PDT)
- Junmei Wang (Wed Jun 25 2008 - 15:44:07 PDT)
- Dong Xu (Wed Jun 25 2008 - 15:09:39 PDT)
AMBER: box shape changed at NVT
- David A. Case (Wed Jun 11 2008 - 08:18:46 PDT)
- fatima.chami.durham.ac.uk (Wed Jun 11 2008 - 07:25:09 PDT)
AMBER: Building ppc64 AMBER10 with xlf fortran 11.1
- Jarrod Smith (Tue Jun 03 2008 - 12:29:31 PDT)
- Ross Walker (Tue Jun 03 2008 - 13:43:43 PDT)
- David A. Case (Mon Jun 02 2008 - 10:56:16 PDT)
- Jarrod Smith (Mon Jun 02 2008 - 09:43:24 PDT)
AMBER: Calcium and Magnesium LJ parameters
- Daniel Smith (Mon Jun 09 2008 - 16:02:28 PDT)
AMBER: Combine mdcrd while stripping WAT problem
- Carlos Simmerling (Thu Jun 12 2008 - 01:05:15 PDT)
- Alexander Metz (Thu Jun 12 2008 - 01:04:08 PDT)
- Francesco Pietra (Thu Jun 12 2008 - 00:09:28 PDT)
- Alexander Metz (Wed Jun 11 2008 - 22:59:18 PDT)
- Francesco Pietra (Wed Jun 11 2008 - 07:57:59 PDT)
- Carlos Simmerling (Tue Jun 10 2008 - 01:03:02 PDT)
- Francesco Pietra (Tue Jun 10 2008 - 00:37:34 PDT)
- Carlos Simmerling (Sun Jun 08 2008 - 12:33:47 PDT)
- Gustavo Seabra (Sun Jun 08 2008 - 11:58:34 PDT)
- Francesco Pietra (Sun Jun 08 2008 - 08:40:07 PDT)
AMBER: Compilation of amber8 patched with ramd
- Vlad Cojocaru (Wed Jun 25 2008 - 02:00:10 PDT)
- Francesco Pietra (Wed Jun 25 2008 - 01:17:59 PDT)
- David A. Case (Tue Jun 24 2008 - 15:06:15 PDT)
- Francesco Pietra (Tue Jun 24 2008 - 14:52:09 PDT)
- Francesco Pietra (Tue Jun 24 2008 - 09:28:18 PDT)
- Vlad Cojocaru (Tue Jun 24 2008 - 08:07:03 PDT)
- David A. Case (Tue Jun 24 2008 - 07:55:10 PDT)
- Francesco Pietra (Tue Jun 24 2008 - 07:32:54 PDT)
AMBER: Compile amber10 parallel with suppied LAM
- James W. Caldwell (Fri Jun 13 2008 - 10:17:57 PDT)
- James W. Caldwell (Fri Jun 13 2008 - 10:06:19 PDT)
- Gustavo Seabra (Thu Jun 12 2008 - 11:20:24 PDT)
- James W. Caldwell (Thu Jun 12 2008 - 11:08:54 PDT)
- Gustavo Seabra (Thu Jun 12 2008 - 10:39:34 PDT)
- James W. Caldwell (Thu Jun 12 2008 - 10:32:13 PDT)
- James W. Caldwell (Thu Jun 12 2008 - 09:31:03 PDT)
AMBER: concerning force fields
- Adrien Delmont (Sat Jun 28 2008 - 09:10:05 PDT)
- Karl Kirschner (kkirschn) (Fri Jun 27 2008 - 06:02:03 PDT)
- Carlos Simmerling (Fri Jun 27 2008 - 05:34:21 PDT)
- Adrien Delmont (Fri Jun 27 2008 - 05:22:08 PDT)
- Carlos Simmerling (Thu Jun 26 2008 - 12:25:04 PDT)
- Adrien Delmont (Thu Jun 26 2008 - 11:29:39 PDT)
- Carlos Simmerling (Thu Jun 26 2008 - 09:16:48 PDT)
- Adrien Delmont (Thu Jun 26 2008 - 08:14:15 PDT)
AMBER: Constrained group
- Robert Duke (Mon Jun 30 2008 - 09:03:15 PDT)
- fatima.chami.durham.ac.uk (Mon Jun 30 2008 - 02:54:02 PDT)
AMBER: Coordinated Zinc
- FyD (Fri Jun 13 2008 - 00:56:08 PDT)
- David A. Case (Thu Jun 12 2008 - 08:59:42 PDT)
- Khaled Barakat (Wed Jun 11 2008 - 12:29:18 PDT)
AMBER: Correlation functions from iRED analysis
- Myunggi Yi (Thu Jun 19 2008 - 09:06:36 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 19 2008 - 06:46:22 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 19 2008 - 06:43:39 PDT)
- Samuel Genheden (a03samge) (Thu Jun 19 2008 - 06:33:46 PDT)
- Myunggi Yi (Thu Jun 19 2008 - 06:14:51 PDT)
- Samuel Genheden (a03samge) (Thu Jun 19 2008 - 06:10:51 PDT)
- Myunggi Yi (Thu Jun 19 2008 - 05:52:55 PDT)
- Samuel Genheden (a03samge) (Thu Jun 19 2008 - 03:22:53 PDT)
AMBER: corrupted restart file
- Carlos Simmerling (Tue Jun 03 2008 - 03:15:21 PDT)
- Cenk \(Jenk\) Andac (Tue Jun 03 2008 - 03:13:29 PDT)
- yavuzturkm.prc.boun.edu.tr (Tue Jun 03 2008 - 02:18:25 PDT)
AMBER: cross correlation function using iRED matrix
- Myunggi Yi (Wed Jun 18 2008 - 11:07:03 PDT)
- fatima.chami.durham.ac.uk (Wed Jun 18 2008 - 10:07:25 PDT)
AMBER: Debugf AMBER9
- John Palmeri (Wed Jun 25 2008 - 00:38:53 PDT)
AMBER: Dihedral Angle Parameters
- Carlos Simmerling (Thu Jun 26 2008 - 15:20:41 PDT)
- Ross Walker (Thu Jun 26 2008 - 15:18:52 PDT)
- Ilyas Yildirim (Thu Jun 26 2008 - 15:07:55 PDT)
- Carlos Simmerling (Thu Jun 26 2008 - 14:30:53 PDT)
- Ilyas Yildirim (Thu Jun 26 2008 - 14:07:16 PDT)
AMBER: dihedral energy calculation inconsistent with gaussian's result
- Jerome.GOLEBIOWSKI.unice.fr (Tue Jun 24 2008 - 01:01:35 PDT)
- Q733 (Mon Jun 23 2008 - 19:43:36 PDT)
AMBER: dihedral potential with odd periodicity
- Germain Vallverdu (Tue Jun 24 2008 - 07:43:26 PDT)
AMBER: drawing repeated units
- Ross Walker (Tue Jun 24 2008 - 14:40:26 PDT)
- Taufik Al-Sarraj (Tue Jun 24 2008 - 15:15:39 PDT)
- Taufik Al-Sarraj (Wed Jun 04 2008 - 13:17:57 PDT)
- Ross Walker (Tue Jun 03 2008 - 16:49:54 PDT)
- Taufik Al-Sarraj (Tue Jun 03 2008 - 16:58:25 PDT)
- Ross Walker (Tue Jun 03 2008 - 14:50:23 PDT)
- Taufik Al-Sarraj (Tue Jun 03 2008 - 15:25:59 PDT)
AMBER: Eigenmode dynamics - imaging traj
- Myunggi Yi (Wed Jun 18 2008 - 06:33:07 PDT)
- E.M. (Wed Jun 18 2008 - 04:16:49 PDT)
- fatima.chami.durham.ac.uk (Wed Jun 18 2008 - 03:09:26 PDT)
AMBER: Eigenmode dynamics in Ptraj
- fatima.chami.durham.ac.uk (Mon Jun 16 2008 - 05:59:42 PDT)
AMBER: Equilibration/Heating - Protein fixed -Problem
- dpandit.brandeis.edu (Wed Jun 11 2008 - 11:17:56 PDT)
- Vahdati N. (Wed Jun 11 2008 - 10:38:50 PDT)
- dpandit.brandeis.edu (Wed Jun 11 2008 - 08:31:40 PDT)
AMBER: error in reading namelist cntrl
- Ross Walker (Mon Jun 30 2008 - 13:26:38 PDT)
- David A. Case (Mon Jun 30 2008 - 13:28:36 PDT)
- Maria Frushicheva (Mon Jun 30 2008 - 13:02:50 PDT)
AMBER: Error message: Install Amber9 on fedora 9
- David A. Case (Thu Jun 05 2008 - 12:17:50 PDT)
- Chih-Ying Lin (Wed Jun 04 2008 - 20:54:29 PDT)
- David A. Case (Mon Jun 02 2008 - 16:04:48 PDT)
- Chih-Ying Lin (Mon Jun 02 2008 - 15:33:42 PDT)
AMBER: Ewald error estimate
- Pavan G (Sun Jun 15 2008 - 07:22:48 PDT)
AMBER: Free energy of dissociation
- David Mobley (Thu Jun 05 2008 - 09:22:24 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 05 2008 - 08:13:03 PDT)
- Gustavo Seabra (Thu Jun 05 2008 - 06:41:03 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 05 2008 - 05:02:43 PDT)
AMBER: Further request answers from Dr. Junmei Wang
- Junmei Wang (Tue Jun 24 2008 - 09:58:49 PDT)
- Rilei Yu (Tue Jun 24 2008 - 08:59:05 PDT)
AMBER: GAFF for organic crystals
- Junmei Wang (Mon Jun 23 2008 - 08:16:50 PDT)
- Rabone, Jeremy (Fri Jun 20 2008 - 01:05:18 PDT)
AMBER: gasteiger is not working with ambertools 1.0
- Alan (Tue Jun 03 2008 - 07:44:07 PDT)
- David A. Case (Mon Jun 02 2008 - 17:12:55 PDT)
AMBER: Group specification problem
- fatima.chami.durham.ac.uk (Fri Jun 27 2008 - 05:59:09 PDT)
AMBER: Help--Great distortion of N terminal nitrogen at the very beginning of heating
- David A. Case (Wed Jun 11 2008 - 10:53:20 PDT)
- David A. Case (Tue Jun 10 2008 - 05:50:27 PDT)
- xiaonan zhang (Tue Jun 10 2008 - 07:23:15 PDT)
- xiaonan zhang (Tue Jun 10 2008 - 05:24:02 PDT)
AMBER: hold atoms fixed
- Gustavo Seabra (Mon Jun 30 2008 - 07:10:53 PDT)
- fatima.chami.durham.ac.uk (Mon Jun 30 2008 - 06:16:09 PDT)
- Boutheina Kerkeni (Mon Jun 30 2008 - 06:12:33 PDT)
- Carlos Simmerling (Mon Jun 30 2008 - 06:02:19 PDT)
- Boutheina Kerkeni (Mon Jun 30 2008 - 05:51:17 PDT)
AMBER: How to adjust the problem of "Vlimit exceeded"
- David A. Case (Mon Jun 23 2008 - 08:16:05 PDT)
- Biman Jana (Mon Jun 23 2008 - 00:28:27 PDT)
AMBER: How to calculate RMSIP after PCA analysis by PTRAJ?
- sychen (Wed Jun 04 2008 - 05:27:45 PDT)
AMBER: how to calculate the interaction energy
- Wang,Ying (Tue Jun 10 2008 - 12:12:17 PDT)
- Thomas Steinbrecher (Tue Jun 10 2008 - 09:45:16 PDT)
- Wang,Ying (Tue Jun 10 2008 - 07:52:10 PDT)
AMBER: How to confirm atom types of small molecule perceived by antechamber
- Junmei Wang (Mon Jun 23 2008 - 07:57:18 PDT)
- David A. Case (Mon Jun 23 2008 - 07:56:17 PDT)
- xiaonan zhang (Mon Jun 23 2008 - 01:39:30 PDT)
AMBER: How to create average structure?
- Carlos Simmerling (Wed Jun 18 2008 - 21:52:35 PDT)
- Shen, Lingling (Wed Jun 18 2008 - 21:44:03 PDT)
AMBER: how to derive torsional angle parameters in gaff
- Balazs JOJART (Thu Jun 26 2008 - 01:53:40 PDT)
- Junmei Wang (Tue Jun 24 2008 - 18:45:42 PDT)
AMBER: How to extract solvent box information from .rst or .mdcrd files?
- David A. Case (Sat Jun 28 2008 - 09:37:45 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 19 2008 - 09:00:32 PDT)
- Panwang Zhou (Thu Jun 19 2008 - 08:34:02 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 19 2008 - 07:47:50 PDT)
- Panwang Zhou (Thu Jun 19 2008 - 07:13:18 PDT)
AMBER: how to extract x,y,z of a set of atoms from an MD trajectories
- fatima.chami.durham.ac.uk (Thu Jun 19 2008 - 02:16:52 PDT)
AMBER: How to get all eigenvalues by "analyze matrix"
- Qi Yan (Thu Jun 12 2008 - 10:39:52 PDT)
AMBER: How to solve - Missing BELE for MM in 1 in amber.
- Hannes Kopitz (Tue Jun 17 2008 - 01:32:31 PDT)
- Thomas Leonard (Mon Jun 16 2008 - 20:06:01 PDT)
- Thomas Leonard (Mon Jun 16 2008 - 20:05:59 PDT)
AMBER: improving GAFF sulfonamide parameters
- David Mobley (Thu Jun 26 2008 - 13:50:03 PDT)
- Junmei Wang (Tue Jun 24 2008 - 07:34:28 PDT)
- Floris Buelens (Tue Jun 17 2008 - 02:57:46 PDT)
AMBER: Installation Problem of AMBER10
- David A. Case (Tue Jun 24 2008 - 07:49:26 PDT)
- Atro Tossavainen (Tue Jun 24 2008 - 07:37:57 PDT)
- bhargav patel (Tue Jun 24 2008 - 03:06:45 PDT)
- Bill Ross (Fri Jun 20 2008 - 13:46:35 PDT)
- David A. Case (Fri Jun 20 2008 - 12:34:09 PDT)
- bhargav patel (Fri Jun 20 2008 - 02:07:12 PDT)
- Bill Ross (Thu Jun 19 2008 - 10:31:42 PDT)
- David A. Case (Thu Jun 19 2008 - 07:53:03 PDT)
- Carlos Simmerling (Thu Jun 19 2008 - 04:05:21 PDT)
- bhargav patel (Thu Jun 19 2008 - 03:57:26 PDT)
AMBER: IRED to time correlation
- fatima.chami.durham.ac.uk (Mon Jun 16 2008 - 13:25:22 PDT)
AMBER: Jarzynski
- David Mobley (Mon Jun 02 2008 - 10:25:16 PDT)
AMBER: ligand complexed simulation
- Siddharth Rastogi (Fri Jun 20 2008 - 00:14:18 PDT)
- mori.cerm.unifi.it (Tue Jun 17 2008 - 04:15:11 PDT)
- Siddharth Rastogi (Tue Jun 17 2008 - 03:56:15 PDT)
AMBER: ligand partial charge and conformation question
- Dong Xu (Thu Jun 26 2008 - 11:01:31 PDT)
AMBER: local coordinate system question
- David A. Case (Wed Jun 25 2008 - 07:32:16 PDT)
- caoch (Wed Jun 25 2008 - 02:33:15 PDT)
AMBER: MAXAT can not be changed for AMBERTool 1.0
- David A. Case (Mon Jun 02 2008 - 16:15:38 PDT)
- Hu, Shaowen (JSC-SK)[USRA] (Mon Jun 02 2008 - 12:41:54 PDT)
AMBER: Missing gaff angle parameters for dimethyl esters
- Junmei Wang (Tue Jun 03 2008 - 06:19:25 PDT)
- Lin, Pohan (Tue Jun 03 2008 - 12:56:32 PDT)
- Lin, Pohan (Mon Jun 02 2008 - 14:20:24 PDT)
AMBER: missing torsion parameters
- Ross Walker (Mon Jun 30 2008 - 15:46:45 PDT)
- John Bennett (Mon Jun 30 2008 - 14:06:07 PDT)
AMBER: MM-GBSA with very positive GB value
- Catein Catherine (Fri Jun 13 2008 - 18:49:53 PDT)
- Carlos Simmerling (Fri Jun 13 2008 - 00:46:55 PDT)
- Catein Catherine (Fri Jun 13 2008 - 00:05:02 PDT)
AMBER: MM-PBSA
- Miguel Ortiz-Lombardía (Wed Jun 18 2008 - 07:41:12 PDT)
- Neha Gandhi (Wed Jun 18 2008 - 00:37:33 PDT)
AMBER: MM-PBSA and delphi
- Qi Yan (Mon Jun 09 2008 - 12:58:28 PDT)
- Neha Gandhi (Mon Jun 09 2008 - 02:57:21 PDT)
- Navnit Kumar Mishra (Mon Jun 09 2008 - 02:05:38 PDT)
- Neha Gandhi (Sun Jun 08 2008 - 22:56:00 PDT)
- Neha Gandhi (Sun Jun 08 2008 - 22:49:54 PDT)
AMBER: MM-PBSA calculation problem
- Wei Huang (Mon Jun 30 2008 - 09:41:16 PDT)
AMBER: MM-PBSA in AMBER 10
- David A. Case (Mon Jun 23 2008 - 18:47:44 PDT)
- Daniel Oehme (Mon Jun 23 2008 - 18:32:24 PDT)
- Daniel Oehme (Sun Jun 22 2008 - 22:07:34 PDT)
- Daniel Oehme (Thu Jun 05 2008 - 20:52:12 PDT)
- Daniel Oehme (Wed Jun 04 2008 - 22:27:39 PDT)
AMBER: multiple dihedral restraints using group (in Amber 10)
- fatima.chami.durham.ac.uk (Wed Jun 18 2008 - 03:05:40 PDT)
- mkseo (Tue Jun 17 2008 - 14:00:50 PDT)
AMBER: NAB documentation
- David A. Case (Sun Jun 08 2008 - 18:38:05 PDT)
- Ramu Anandakrishnan (Fri Jun 06 2008 - 21:08:51 PDT)
- David Case (Fri Jun 06 2008 - 09:24:44 PDT)
AMBER: NAB documentation for programmers
- ramu.vt.edu (Wed Jun 04 2008 - 11:59:27 PDT)
AMBER: NAN errors in Etot, EPtot, EKtot and EELEC
- Praveena Gopal (Thu Jun 05 2008 - 23:16:40 PDT)
- Carlos Simmerling (Thu Jun 05 2008 - 05:16:22 PDT)
- Praveena Gopal (Thu Jun 05 2008 - 05:04:00 PDT)
AMBER: NAN errors still exist
- Carlos Simmerling (Fri Jun 06 2008 - 03:57:49 PDT)
- Praveena Gopal (Fri Jun 06 2008 - 02:56:58 PDT)
AMBER: netcdf configure returned 1
- Jens Lattig (Thu Jun 05 2008 - 06:46:45 PDT)
AMBER: netcdf configure returned 1 - PROBLEM SOLVED
- Jens Lattig (Thu Jun 05 2008 - 07:42:03 PDT)
AMBER: Nmode - entropy calculation of receptor - should I apply restraint?
- David A. Case (Thu Jun 05 2008 - 11:50:16 PDT)
- Seth Lilavivat (Thu Jun 05 2008 - 10:03:08 PDT)
AMBER: nmode analysis
- Vahdati N. (Mon Jun 30 2008 - 05:41:40 PDT)
- Joachim Reichelt (Mon Jun 30 2008 - 05:36:32 PDT)
- Mark Williamson (Mon Jun 30 2008 - 05:12:09 PDT)
- Joachim Reichelt (Mon Jun 30 2008 - 04:53:21 PDT)
AMBER: NMODE units and hrmax value for Langevine modes
- David A. Case (Thu Jun 05 2008 - 11:12:24 PDT)
- Yang, Lee-Wei (Wed Jun 04 2008 - 20:55:45 PDT)
- David A. Case (Wed Jun 04 2008 - 10:30:36 PDT)
- Yang, Lee-Wei (Wed Jun 04 2008 - 09:27:00 PDT)
AMBER: NMR refinement
- David A. Case (Mon Jun 30 2008 - 07:44:51 PDT)
- teresa.ierano.unina.it (Mon Jun 30 2008 - 03:37:48 PDT)
AMBER: note on the molsurf and "Assertion `sarg1 >= 0.0' failed" error
- Kateryna Miroshnychenko (Tue Jun 03 2008 - 00:05:51 PDT)
- David A. Case (Mon Jun 02 2008 - 16:23:46 PDT)
AMBER: output file AMBER9_MPI
- Vijay Manickam Achari (Thu Jun 26 2008 - 12:06:19 PDT)
AMBER: PCA - analysis
- Ibrahim Moustafa (Sun Jun 01 2008 - 11:00:35 PDT)
AMBER: PCA analysis
- Ibrahim Moustafa (Mon Jun 02 2008 - 14:09:17 PDT)
AMBER: PCAL and polar contribution in the output file
- Neha Gandhi (Sun Jun 15 2008 - 06:56:20 PDT)
- Hannes Kopitz (Sun Jun 15 2008 - 06:30:23 PDT)
- Neha Gandhi (Thu Jun 12 2008 - 22:42:54 PDT)
AMBER: pmemd 10 output
- Ross Walker (Fri Jun 27 2008 - 09:40:48 PDT)
- Vlad Cojocaru (Fri Jun 27 2008 - 09:34:37 PDT)
- Vlad Cojocaru (Fri Jun 27 2008 - 09:24:58 PDT)
- Ross Walker (Fri Jun 27 2008 - 09:16:44 PDT)
- Vlad Cojocaru (Fri Jun 27 2008 - 08:48:35 PDT)
AMBER: potassium ion
- Bill Ross (Sat Jun 14 2008 - 13:04:31 PDT)
- Lars Skjærven (Thu Jun 12 2008 - 10:46:36 PDT)
AMBER: problem in starting sander
- Carlos Simmerling (Sun Jun 08 2008 - 21:36:32 PDT)
- Qiuting Hong (Sun Jun 08 2008 - 19:40:52 PDT)
- Ross Walker (Sun Jun 08 2008 - 15:30:17 PDT)
- Qiuting Hong (Sun Jun 08 2008 - 14:52:34 PDT)
- Carlos Simmerling (Sun Jun 08 2008 - 12:53:33 PDT)
- Qiuting Hong (Sun Jun 08 2008 - 11:25:43 PDT)
AMBER: problem of install amber9
- Xioling Chuang (Thu Jun 05 2008 - 02:09:27 PDT)
- Xioling Chuang (Thu Jun 05 2008 - 01:37:27 PDT)
AMBER: Problem of Ptraj analyze matrix
- Qi Yan (Mon Jun 09 2008 - 07:47:16 PDT)
- Adrian Roitberg (Mon Jun 09 2008 - 06:51:42 PDT)
- Qi Yan (Mon Jun 09 2008 - 06:37:01 PDT)
- David A. Case (Sun Jun 08 2008 - 18:38:13 PDT)
- Qi Yan (Sat Jun 07 2008 - 11:24:55 PDT)
AMBER: Problem While Installing Amber
- Ross Walker (Fri Jun 06 2008 - 08:30:26 PDT)
- Ranga Swamy (Fri Jun 06 2008 - 02:34:17 PDT)
AMBER: Problem with running refinement of NMR structures with RDCs
- David A. Case (Sun Jun 15 2008 - 18:50:53 PDT)
- Qi Zhang (Sun Jun 15 2008 - 13:20:21 PDT)
AMBER: PROBLEM: AmberTools Installation using Ubuntu
- David A. Case (Sat Jun 14 2008 - 12:09:02 PDT)
- Mark Williamson (Sat Jun 14 2008 - 08:13:18 PDT)
- David A. Case (Wed Jun 11 2008 - 08:15:00 PDT)
- Jens Lattig (Wed Jun 11 2008 - 01:59:12 PDT)
- Mark Williamson (Tue Jun 10 2008 - 04:31:48 PDT)
- Jens Lattig (Tue Jun 10 2008 - 01:00:08 PDT)
- David Case (Fri Jun 06 2008 - 09:25:45 PDT)
- Jens Lattig (Fri Jun 06 2008 - 01:13:06 PDT)
AMBER: problems form the pdb to the mol2
- Junmei Wang (Wed Jun 25 2008 - 09:29:44 PDT)
- Cyril Bauvais (Wed Jun 25 2008 - 06:00:54 PDT)
- Rilei Yu (Tue Jun 24 2008 - 09:14:15 PDT)
- Cyril Bauvais (Tue Jun 24 2008 - 07:05:36 PDT)
- Junmei Wang (Tue Jun 24 2008 - 06:47:24 PDT)
- David A. Case (Mon Jun 23 2008 - 18:51:46 PDT)
- Rilei Yu (Mon Jun 23 2008 - 18:01:33 PDT)
AMBER: Problems simulating a protein-ligand complex
- Sasha Buzko (Mon Jun 09 2008 - 10:57:20 PDT)
- M. L. Dodson (Sat Jun 07 2008 - 07:53:57 PDT)
- Adrian Roitberg (Sat Jun 07 2008 - 05:36:21 PDT)
- Sasha Buzko (Fri Jun 06 2008 - 22:37:53 PDT)
- Ross Walker (Fri Jun 06 2008 - 22:15:32 PDT)
- Sasha Buzko (Fri Jun 06 2008 - 16:40:07 PDT)
- Ross Walker (Fri Jun 06 2008 - 16:34:39 PDT)
- Sasha Buzko (Fri Jun 06 2008 - 16:13:19 PDT)
- Ross Walker (Fri Jun 06 2008 - 15:55:37 PDT)
- Sasha Buzko (Fri Jun 06 2008 - 15:16:29 PDT)
- David A. Case (Fri Jun 06 2008 - 11:59:52 PDT)
- Sasha Buzko (Fri Jun 06 2008 - 10:55:05 PDT)
AMBER: problems with sleap
- Qi Zhang (Mon Jun 16 2008 - 04:46:26 PDT)
- Alan (Mon Jun 16 2008 - 09:07:24 PDT)
- David A. Case (Mon Jun 16 2008 - 08:48:42 PDT)
- Alan (Wed Jun 04 2008 - 23:48:03 PDT)
- David A. Case (Wed Jun 04 2008 - 16:52:00 PDT)
- Alan (Wed Jun 04 2008 - 08:40:04 PDT)
AMBER: program to calculate rmsd
- Ross Walker (Tue Jun 17 2008 - 01:26:53 PDT)
- rams rams (Mon Jun 16 2008 - 19:28:24 PDT)
AMBER: ptraj
- fatima.chami.durham.ac.uk (Wed Jun 18 2008 - 08:21:50 PDT)
AMBER: ptraj - read in part of trajectory
- Seth Lilavivat (Fri Jun 27 2008 - 10:01:03 PDT)
- Carlos Simmerling (Fri Jun 27 2008 - 10:00:32 PDT)
- Vlad Cojocaru (Fri Jun 27 2008 - 09:59:14 PDT)
- Seth Lilavivat (Fri Jun 27 2008 - 09:41:51 PDT)
AMBER: PTRAJ - Segmentation Fault
- dpandit.brandeis.edu (Wed Jun 11 2008 - 12:40:25 PDT)
- Thomas Cheatham (Wed Jun 11 2008 - 11:15:00 PDT)
- dpandit.brandeis.edu (Wed Jun 11 2008 - 10:48:54 PDT)
- Jianyin Shao (Wed Jun 11 2008 - 09:01:07 PDT)
- dpandit.brandeis.edu (Tue Jun 10 2008 - 14:36:08 PDT)
AMBER: Ptraj / ambmask | Using distance-based masks to strip a trajectory
- Jianyin Shao (Wed Jun 11 2008 - 08:55:12 PDT)
- Ian (Wed Jun 11 2008 - 03:53:42 PDT)
- Vlad Cojocaru (Fri Jun 06 2008 - 11:50:55 PDT)
- David Case (Fri Jun 06 2008 - 09:27:06 PDT)
- Vlad Cojocaru (Fri Jun 06 2008 - 02:59:54 PDT)
- Ian (Fri Jun 06 2008 - 02:19:58 PDT)
AMBER: ptraj has trouble with x-plor psf file from VMD
- Jufang Shan (Mon Jun 02 2008 - 08:52:28 PDT)
AMBER: ptraj imaging issue
- Jianyin Shao (Thu Jun 05 2008 - 09:23:52 PDT)
- Vlad Cojocaru (Thu Jun 05 2008 - 07:30:42 PDT)
- Vlad Cojocaru (Thu Jun 05 2008 - 01:48:43 PDT)
- Jianyin Shao (Wed Jun 04 2008 - 14:25:27 PDT)
- Vlad Cojocaru (Wed Jun 04 2008 - 12:07:44 PDT)
AMBER: QM/MM
- Taufik Al-Sarraj (Wed Jun 11 2008 - 09:28:34 PDT)
- Gustavo Seabra (Wed Jun 11 2008 - 08:22:16 PDT)
- Taufik Al-Sarraj (Wed Jun 11 2008 - 09:09:24 PDT)
AMBER: qmmm_DFTB problem
- Gustavo Seabra (Tue Jun 24 2008 - 07:31:15 PDT)
- Dr. Xiaofeng (Frank) Duan (Tue Jun 24 2008 - 06:58:46 PDT)
AMBER: Query on MM-PBSA
- Neha Gandhi (Thu Jun 05 2008 - 22:46:32 PDT)
AMBER: question about the charge
- Harry (Yicun) Ni (Fri Jun 27 2008 - 16:57:37 PDT)
- Carlos Simmerling (Fri Jun 27 2008 - 13:52:22 PDT)
- Harry (Yicun) Ni (Fri Jun 27 2008 - 13:37:55 PDT)
AMBER: Question for how to get all eigenvalues by "analyze matrix"
- Qi Yan (Wed Jun 11 2008 - 14:34:40 PDT)
AMBER: questions about gaff
- Steven (Fri Jun 20 2008 - 07:11:08 PDT)
- Mark Williamson (Wed Jun 18 2008 - 19:35:42 PDT)
- yzhao (Wed Jun 18 2008 - 19:01:45 PDT)
AMBER: rdparm help
- Alan (Mon Jun 23 2008 - 08:23:50 PDT)
- Thomas Cheatham (Fri Jun 20 2008 - 07:35:36 PDT)
- Alan (Fri Jun 20 2008 - 04:12:17 PDT)
AMBER: rdparm Segmentation fault
- David A. Case (Wed Jun 25 2008 - 17:07:20 PDT)
- Alan (Wed Jun 25 2008 - 14:24:34 PDT)
AMBER: rdparm Segmentation fault on Ubuntu
- Alan (Tue Jun 24 2008 - 08:50:12 PDT)
AMBER: Regarding force field ff02 and ion library
- Thomas Cheatham III (Mon Jun 30 2008 - 14:30:05 PDT)
- David A. Case (Mon Jun 30 2008 - 14:14:37 PDT)
- Abhishek Singh (Mon Jun 30 2008 - 13:54:52 PDT)
AMBER: REMD Amber10 : error in reading namelist cntrl
- Carlos Simmerling (Fri Jun 27 2008 - 07:47:42 PDT)
- rebeca (Fri Jun 27 2008 - 02:01:26 PDT)
AMBER: SANDER and PMEMD with openmpi. Failure 'make test.pmemd'
- Ross Walker (Mon Jun 02 2008 - 10:52:33 PDT)
- Francesco Pietra (Sun Jun 01 2008 - 00:12:12 PDT)
AMBER: SANDER and PMEMD with openmpi. NO MORE failure 'make test.pmemd'
- Francesco Pietra (Mon Jun 02 2008 - 03:22:38 PDT)
AMBER: Sander crashes >99999 atoms
- David A. Case (Fri Jun 13 2008 - 09:59:32 PDT)
- plmallip.mail.uh.edu (Thu Jun 12 2008 - 21:47:47 PDT)
- David A. Case (Thu Jun 12 2008 - 18:25:31 PDT)
- plmallip.mail.uh.edu (Thu Jun 12 2008 - 16:26:57 PDT)
AMBER: sander.MPI / openmpi on PBS
- Arturas Ziemys (Wed Jun 11 2008 - 11:59:52 PDT)
AMBER: sander.MPI / parallel
- David A. Case (Mon Jun 16 2008 - 11:33:35 PDT)
- Carlos Simmerling (Mon Jun 16 2008 - 11:28:04 PDT)
- Arturas Ziemys (Mon Jun 16 2008 - 11:19:36 PDT)
- David LeBard (Mon Jun 16 2008 - 11:08:20 PDT)
- David LeBard (Mon Jun 16 2008 - 11:07:21 PDT)
- Arturas Ziemys (Mon Jun 16 2008 - 10:56:57 PDT)
- Carlos Simmerling (Mon Jun 16 2008 - 10:43:39 PDT)
- Arturas Ziemys (Mon Jun 16 2008 - 10:00:34 PDT)
AMBER: Seed for random number generator
- Francesco Pietra (Sun Jun 29 2008 - 01:22:12 PDT)
AMBER: simple sander
- JAMES W CALDWELL (Thu Jun 19 2008 - 18:47:32 PDT)
- David A. Case (Thu Jun 19 2008 - 18:40:46 PDT)
- James W. Caldwell (Thu Jun 19 2008 - 16:30:39 PDT)
AMBER: Simulating complexes with magnesium atoms
- Sasha Buzko (Tue Jun 10 2008 - 14:32:13 PDT)
AMBER: SIZE.h problems
- Mark Williamson (Sat Jun 21 2008 - 14:22:37 PDT)
- 欧阳德方 (Sat Jun 21 2008 - 05:33:49 PDT)
AMBER: sleap - TER-card
- David A. Case (Thu Jun 26 2008 - 18:19:01 PDT)
- In Hee Park (Thu Jun 26 2008 - 17:31:40 PDT)
- David A. Case (Wed Jun 25 2008 - 15:05:59 PDT)
- In Hee Park (Wed Jun 25 2008 - 12:14:39 PDT)
AMBER: SMD pulling velocity
- Gustavo Seabra (Tue Jun 10 2008 - 07:22:48 PDT)
- fatima.chami.durham.ac.uk (Tue Jun 10 2008 - 07:06:38 PDT)
AMBER: SMD RESTRAINTS
- Adrian Roitberg (Thu Jun 12 2008 - 12:23:26 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 12 2008 - 10:07:49 PDT)
- Adrian Roitberg (Thu Jun 12 2008 - 09:51:56 PDT)
- fatima.chami.durham.ac.uk (Thu Jun 12 2008 - 09:23:00 PDT)
AMBER: solvate box : buffer list
- fatima.chami.durham.ac.uk (Wed Jun 04 2008 - 03:07:06 PDT)
- David A. Case (Tue Jun 03 2008 - 11:22:16 PDT)
- fatima.chami.durham.ac.uk (Tue Jun 03 2008 - 10:51:55 PDT)
AMBER: source of AMBER9
- Germain Vallverdu (Mon Jun 23 2008 - 07:09:29 PDT)
AMBER: sp carbon notation?
- David A. Case (Wed Jun 18 2008 - 17:22:14 PDT)
- Laura Benton (Wed Jun 18 2008 - 16:16:35 PDT)
AMBER: suggestion for next amberTools 1.1
- David A. Case (Wed Jun 18 2008 - 17:32:36 PDT)
- M. L. Dodson (Wed Jun 18 2008 - 08:43:44 PDT)
- David A. Case (Tue Jun 17 2008 - 08:42:14 PDT)
- Alan (Tue Jun 17 2008 - 04:01:06 PDT)
AMBER: syn and anti conformation
- Carlos Simmerling (Wed Jun 04 2008 - 12:34:31 PDT)
- Rabin (Wed Jun 04 2008 - 12:29:58 PDT)
AMBER: Temperature controlling method in AMBER
- David A. Case (Tue Jun 03 2008 - 07:56:51 PDT)
- tinni sona (Tue Jun 03 2008 - 02:43:11 PDT)
AMBER: Test scripts
- James W. Caldwell (Fri Jun 27 2008 - 09:54:56 PDT)
- David A. Case (Fri Jun 27 2008 - 09:44:25 PDT)
- James W. Caldwell (Fri Jun 27 2008 - 09:35:26 PDT)
AMBER: the SPCFW water model
- Vlad Cojocaru (Mon Jun 16 2008 - 09:19:34 PDT)
AMBER: TI calculations in Amber10
- Thomas Steinbrecher (Wed Jun 25 2008 - 09:15:47 PDT)
- Samuel Genheden (a03samge) (Wed Jun 25 2008 - 04:58:28 PDT)
AMBER: tip3p water and shake
- David A. Case (Wed Jun 18 2008 - 22:15:48 PDT)
- Wang,Ying (Wed Jun 18 2008 - 20:44:27 PDT)
- Wang,Ying (Wed Jun 18 2008 - 18:03:55 PDT)
- Ross Walker (Wed Jun 18 2008 - 14:35:30 PDT)
- Wang,Ying (Wed Jun 18 2008 - 13:07:13 PDT)
AMBER: to understand GAFF: about A and B coefficients
- David A. Case (Tue Jun 17 2008 - 09:52:41 PDT)
- Alan (Tue Jun 17 2008 - 09:42:34 PDT)
AMBER: Trajectory - Average Structure - Equilibration
- dpandit.brandeis.edu (Wed Jun 11 2008 - 12:37:46 PDT)
AMBER: Trajectory in "Sietraj"
- Alfredo Quevedo (Tue Jun 03 2008 - 08:29:24 PDT)
- Purisima, Enrico (Tue Jun 03 2008 - 07:39:49 PDT)
- Florian Haberl (Tue Jun 03 2008 - 06:41:31 PDT)
- Alfredo Quevedo (Tue Jun 03 2008 - 07:08:56 PDT)
- Purisima, Enrico (Tue Jun 03 2008 - 06:55:20 PDT)
- Alfredo Quevedo (Tue Jun 03 2008 - 06:35:20 PDT)
AMBER: trajout input
- Swarup Gupta (Sun Jun 22 2008 - 20:01:31 PDT)
- Thomas Cheatham III (Fri Jun 20 2008 - 10:57:43 PDT)
- Thomas Leonard (Fri Jun 20 2008 - 03:05:55 PDT)
- Barbault Florent (Fri Jun 20 2008 - 02:43:28 PDT)
- Thomas Leonard (Fri Jun 20 2008 - 02:23:55 PDT)
AMBER: unsubscribe amber
- Rabin (Wed Jun 25 2008 - 17:48:51 PDT)
- sanket.deshmukh.ucd.ie (Tue Jun 24 2008 - 04:07:42 PDT)
AMBER: updating documentation
- David A. Case (Fri Jun 13 2008 - 09:52:14 PDT)
- Alan (Thu Jun 12 2008 - 16:09:24 PDT)
- David A. Case (Thu Jun 12 2008 - 08:10:36 PDT)
- Alan (Thu Jun 12 2008 - 02:52:40 PDT)
AMBER: Using AMBER forces
- Ross Walker (Tue Jun 24 2008 - 11:19:13 PDT)
- Steven Winfield (Tue Jun 24 2008 - 09:54:49 PDT)
- Ross Walker (Tue Jun 24 2008 - 09:22:25 PDT)
- Steven Winfield (Tue Jun 24 2008 - 08:44:41 PDT)
AMBER: using Velocity-Verlet algorithm
- David A. Case (Thu Jun 12 2008 - 09:09:49 PDT)
- oguz gurbulak (Thu Jun 12 2008 - 05:07:20 PDT)
AMBER: Vaccum Simulations in PMEMD !!
- Robert Duke (Thu Jun 05 2008 - 07:17:13 PDT)
- Sampath Koppole (Thu Jun 05 2008 - 05:53:35 PDT)
AMBER: VMD file generation 4 - mdcrd analysis
- Campbell, Patrick (Mon Jun 02 2008 - 13:21:00 PDT)
AMBER: VMD file generation 4 - mdcrd ptraj analysis
- Carlos Simmerling (Mon Jun 02 2008 - 13:06:39 PDT)
- Campbell, Patrick (Mon Jun 02 2008 - 12:54:06 PDT)
- Carlos Simmerling (Mon Jun 02 2008 - 12:11:24 PDT)
- Campbell, Patrick (Mon Jun 02 2008 - 11:26:15 PDT)
AMBER: VMD Movie .mdcrd file ptraj
- David Watson (Fri Jun 06 2008 - 07:57:16 PDT)
- Campbell, Patrick (Fri Jun 06 2008 - 06:22:50 PDT)
AMBER: watershell cero?
- rebeca (Mon Jun 30 2008 - 09:22:11 PDT)
AMBER: wrapping a restart file
- Robert Duke (Mon Jun 30 2008 - 09:34:54 PDT)
- Gustavo Seabra (Mon Jun 30 2008 - 08:31:53 PDT)
- fatima.chami.durham.ac.uk (Mon Jun 30 2008 - 07:40:58 PDT)
AMBER: writing a script in amber
- Taufik Al-Sarraj (Mon Jun 02 2008 - 17:28:39 PDT)
AMBER:VMD Movie.mdcrd
- Campbell, Patrick (Fri Jun 06 2008 - 11:56:52 PDT)
AW: AMBER: MM-PBSA
- Alexander Metz (Wed Jun 18 2008 - 03:43:18 PDT)
solvating RNA in 8M urea box
- Ross Walker (Thu Jun 05 2008 - 17:12:42 PDT)
SV: AMBER: Correlation functions from iRED analysis
- fatima.chami.durham.ac.uk (Thu Jun 19 2008 - 09:05:36 PDT)
- Samuel Genheden (a03samge) (Thu Jun 19 2008 - 08:53:29 PDT)
SV: SV: AMBER: Correlation functions from iRED analysis
- Samuel Genheden (a03samge) (Thu Jun 19 2008 - 13:06:17 PDT)

Amber Archive Jun 2008 by subject