AMBER: A-prime RNA input file

From: 欧阳德方 <ouyangdf1978.hotmail.com>
Date: Tue, 24 Jun 2008 19:16:27 +0800

Hi, all,
 
 
I want to build A-prime RNA (A'-RNA) pdb file. The sequence is as following:
      5'- GCAACAGUUACUGCGACGUUU-3'
 3'- UUCGUUGUCAAUGACGCUGCA-5
Because it is irregular, I cannot use nucgen to build it. But NAB from website only builds irregular A-RNA, not A'-RNA.
NAB:http://structure.usc.edu/make-na/server.html
 
Could u give me some advices ?
 
Thanks!
 
Ouyang
 
 
 
_________________________________________________________________
多个邮箱同步管理,live mail客户端万人抢用中
http://get.live.cn/product/mail.html
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
      to majordomo.scripps.edu
Received on Wed Jun 25 2008 - 06:07:42 PDT
Custom Search