AMBER: Vaccum Simulations in PMEMD !!

From: Sampath Koppole <sampathkoppole.yahoo.com>
Date: Thu, 5 Jun 2008 05:53:35 -0700 (PDT)

Dear Amber-users,
Is there a way one can do a standard vacuum MD simulation with or without cutoff (Equivalent to setting igb = 6 in Sander) using PMEMD version in Amber 9.

If not, has this been implemented in PMEMD version included in Amber 10 ?

Thanks for your time and help.

With best regards,
Sampath. 

-- 
*****************************************************************
Dr. Sampath Koppole,                                      
Horburgstr. 35
CH 4057 Basel
Switzerland.
Ph: +41-76-422-8100
*****************************************************************
      
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Received on Sun Jun 08 2008 - 06:07:33 PDT
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