Re: AMBER: problems with sleap

From: David A. Case <case.scripps.edu>
Date: Wed, 4 Jun 2008 16:52:00 -0700

On Wed, Jun 04, 2008, Alan wrote:
>
> sleap -f sleap.in >| sleap.out
>
> For one I got top and xyz, but all others, I got this:
> [snip]
> [gtkleap]$ X = loadpdb mypdb.pdb
> basic_string::substr
>
> and it failed.
>
> What's wrong with my pdbs?

Without seing your files, it's hard to be of much help. There may be nothing
wrong with the pdb files -- the fastbld part of sleap is very new, and might
not work for all molecules. Can you post an example that gives the
above error?

...dac
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Received on Sun Jun 08 2008 - 06:07:21 PDT
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