> Thank you for your suggestion but even after making the change I still got the
> segmentation fault. Based on AMBER archive messages I also removed radial
> calculation but still the same problem. Here is the edited file.
...
> trajin eq_pro_hGH.mdcrd
> rms first out eq_pro_hGH_rms_bef.out .CA,C,N
> center : 1-190
^^^
center :1-190 mass origin
> image origin center familiar
> trajout eq_pro_hGH_reimage.mdcrd
> rms first out eq_pro_hGH_rms.out .CA,C,N
> strip :WAT
> strip :Na+
> average avg.pdb pdb
> atomicfluct out out bfactor_eq_pro_bfactor.dat byatom bfactor
> trajout eq_pro_hGH_reima_strip.mdcrd nobox
--tec3
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Received on Sun Jun 15 2008 - 06:07:17 PDT
