Re: AMBER: nmode analysis

From: Mark Williamson <mark.williamson.imperial.ac.uk>
Date: Mon, 30 Jun 2008 13:12:09 +0100

Joachim Reichelt wrote:

> So what program can be used to visualize the modes. VMD does not uses
> them but the tarjectories.

You might want to try Interactive Essential Dynamics, since IIRC this
can do what you want:

http://mccammon.ucsd.edu/ied/

http://dx.doi.org/10.1007/s10822-004-4121-z


regards,

Mark
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Received on Wed Jul 02 2008 - 06:07:19 PDT
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