Amber Archive Aug 2020: by subject

[AMBER] "After the fact" lifetime analysis with CPPTRAJ
- Gustaf Olsson (Mon Aug 31 2020 - 03:27:45 PDT)
- Gustaf Olsson (Fri Aug 28 2020 - 05:11:52 PDT)
[AMBER] "Atom does not have a type" despite adding .frcmod parameters
- David A Case (Fri Aug 28 2020 - 05:04:32 PDT)
- Maria Nagan (Thu Aug 27 2020 - 17:59:02 PDT)
- Ayesha Fatima (Thu Aug 27 2020 - 17:55:26 PDT)
- Maria Nagan (Thu Aug 27 2020 - 16:02:21 PDT)
- Ayesha Fatima (Thu Aug 27 2020 - 15:42:55 PDT)
- Erika Davidoff (Thu Aug 27 2020 - 12:56:25 PDT)
[AMBER] "FATAL: Atom *** does not have a type" Error
- David A Case (Mon Aug 31 2020 - 05:23:29 PDT)
- Kashyap, Jatin (Sat Aug 29 2020 - 21:45:39 PDT)
- David A Case (Sat Aug 29 2020 - 10:23:59 PDT)
- Elvis Martis (Fri Aug 28 2020 - 23:29:10 PDT)
- Jatin Kashyap (Fri Aug 28 2020 - 22:44:11 PDT)
[AMBER] about pressure calculation in Amber18
- Li, Min (Sun Aug 09 2020 - 21:16:35 PDT)
[AMBER] Amazon Cloud services and Amber
- Thomas Cheatham (Wed Aug 12 2020 - 15:37:20 PDT)
- Luca Codutti (Wed Aug 12 2020 - 05:58:40 PDT)
- Raman Preet Singh (Wed Aug 12 2020 - 05:47:36 PDT)
- Gustaf Olsson (Wed Aug 12 2020 - 05:40:38 PDT)
- Debarati DasGupta (Wed Aug 12 2020 - 05:24:31 PDT)
[AMBER] amber14 cuda code does not work
- Carlos (Tue Aug 25 2020 - 08:28:22 PDT)
- Daniel Roe (Mon Aug 24 2020 - 07:46:27 PDT)
- Carlos (Sun Aug 23 2020 - 12:23:10 PDT)
- Bill Ross (Sun Aug 23 2020 - 08:30:19 PDT)
- David A Case (Sun Aug 23 2020 - 07:33:26 PDT)
- Carlos (Sat Aug 22 2020 - 21:52:26 PDT)
[AMBER] AMBER18 pmemd.MPI installation error
- David A Case (Tue Aug 18 2020 - 05:45:47 PDT)
- Shubhandra Tripathi (Mon Aug 17 2020 - 06:43:47 PDT)
[AMBER] Amber20 install problem （Geng Dong）
- Gustaf Olsson (Thu Aug 20 2020 - 00:45:32 PDT)
[AMBER] Amber20 Performance on RTX (Turing): known problems, with a patch forthcoming
- David A Case (Fri Aug 07 2020 - 17:41:25 PDT)
[AMBER] Amber20 with PLUMED not working with multiple CPUs
- Amanda Buyan (Tue Aug 11 2020 - 16:23:24 PDT)
- viktor drobot (Tue Aug 11 2020 - 00:19:20 PDT)
- Amanda Buyan (Mon Aug 10 2020 - 21:23:23 PDT)
- viktor drobot (Mon Aug 10 2020 - 00:25:30 PDT)
- Amanda Buyan (Sun Aug 09 2020 - 16:25:13 PDT)
[AMBER] Antechamber and parmchk2 problem in case of processing mol2 input files
- Scott Brozell (Thu Aug 27 2020 - 14:43:01 PDT)
- Marek Maly (Tue Aug 25 2020 - 10:07:48 PDT)
- Scott Brozell (Fri Aug 21 2020 - 15:02:13 PDT)
- Scott Brozell (Thu Aug 20 2020 - 18:02:00 PDT)
- Marek Maly (Thu Aug 20 2020 - 03:21:08 PDT)
[AMBER] ANTECHAMBER error: Fatal Error! Weird atomic valence (5) for atom (ID: 7, Name: C5).
- Carlos Simmerling (Tue Aug 25 2020 - 03:44:57 PDT)
- Elvis Martis (Tue Aug 25 2020 - 01:41:01 PDT)
- Pooja Kesari (Tue Aug 25 2020 - 01:33:01 PDT)
[AMBER] Are Amber program can running using AMD processor?
- Setyanto Md (Mon Aug 03 2020 - 22:40:31 PDT)
- Bill Ross (Mon Aug 03 2020 - 21:43:46 PDT)
- Bill Ross (Mon Aug 03 2020 - 21:39:23 PDT)
- Setyanto Md (Mon Aug 03 2020 - 20:25:18 PDT)
[AMBER] asking about "timlim" in accelerated MD
- Setyanto Md (Thu Aug 06 2020 - 16:04:22 PDT)
- David A Case (Thu Aug 06 2020 - 13:19:30 PDT)
- Setyanto Md (Thu Aug 06 2020 - 09:22:24 PDT)
[AMBER] Asking for Fe2-S2 cluster and Molybdopterin AMBER force field parameters
- Maghsoud, Yazdan (Mon Aug 31 2020 - 11:53:51 PDT)
[AMBER] Assigning new velocities from Maxwell-Boltzmann distribution
- German P. Barletta (Wed Aug 12 2020 - 12:16:19 PDT)
[AMBER] Assigning new velocities from Maxwell-Boltzmann distribution (ntx = 1)
- Daniel Roe (Wed Aug 12 2020 - 06:18:13 PDT)
- German P. Barletta (Tue Aug 11 2020 - 16:46:27 PDT)
- David A Case (Mon Aug 10 2020 - 04:57:40 PDT)
- Bill Ross (Sun Aug 09 2020 - 23:27:45 PDT)
- German P. Barletta (Sun Aug 09 2020 - 13:43:20 PDT)
[AMBER] Attention: All CPPTRAJ Questions
- aishen (Mon Aug 31 2020 - 12:35:38 PDT)
- Daniel Roe (Mon Aug 31 2020 - 09:55:20 PDT)
[AMBER] azobenzene atoms name in amber format
- David A Case (Mon Aug 31 2020 - 12:30:12 PDT)
- Aashish Bhatt (Mon Aug 31 2020 - 04:42:26 PDT)
[AMBER] CALL FOR PAPER - 16th German Conference on Cheminformatics (GCC) and the SAMPL satellite workshop
- Guessregen, Stefan /DE (Sat Aug 08 2020 - 03:45:10 PDT)
[AMBER] Caping error
- mohamed marzouk (Thu Aug 06 2020 - 22:39:44 PDT)
[AMBER] Change covar matrix precision when crdaction is used
- Guadalupe Alvarez (Wed Aug 26 2020 - 12:56:39 PDT)
[AMBER] Compiling AmberTools on macOS
- Gustaf Olsson (Wed Aug 12 2020 - 07:08:23 PDT)
[AMBER] Confusion regarding Center of mass coordinates for protein, with CPPTRAJ
- Prathit Chatterjee (Thu Aug 27 2020 - 04:58:48 PDT)
[AMBER] conversion of tripose mol2 to amber type
- David A Case (Wed Aug 05 2020 - 13:07:20 PDT)
- Nikhil Maroli (Wed Aug 05 2020 - 10:30:50 PDT)
- David A Case (Tue Aug 04 2020 - 18:37:09 PDT)
- Nikhil Maroli (Tue Aug 04 2020 - 05:21:08 PDT)
[AMBER] converting prmtop to psf with improper and cross-term info stripped off
- Daniel Roe (Fri Aug 21 2020 - 13:48:52 PDT)
- Lod King (Thu Aug 20 2020 - 13:22:41 PDT)
[AMBER] Defining/Selecting BLAS with cmake
- Gustaf Olsson (Mon Aug 10 2020 - 03:19:03 PDT)
[AMBER] Error in Gausian file preparation using MCPB.py
- gagandeep singh (Sat Aug 01 2020 - 18:56:45 PDT)
- gagandeep singh (Fri Jul 31 2020 - 14:01:14 PDT)
[AMBER] Error searching for compatible GPU
- Camila Clemente (Sun Aug 16 2020 - 09:00:53 PDT)
- David A Case (Sun Aug 16 2020 - 05:04:08 PDT)
- Camila Clemente (Sat Aug 15 2020 - 18:01:37 PDT)
[AMBER] error while running tutorial B5
- Gustaf Olsson (Tue Aug 25 2020 - 00:24:14 PDT)
- Ayesha Fatima (Mon Aug 24 2020 - 09:19:50 PDT)
- Gustaf Olsson (Mon Aug 24 2020 - 01:03:58 PDT)
- Ayesha Fatima (Sun Aug 23 2020 - 23:44:50 PDT)
- David A Case (Sun Aug 23 2020 - 18:39:16 PDT)
- Ayesha Fatima (Sun Aug 23 2020 - 11:08:48 PDT)
[AMBER] EXTENDED DEADLINE for Submissions - 16th German Conference on Cheminformatics (GCC) and the SAMPL satellite workshop
- Guessregen, Stefan /DE (Sun Aug 30 2020 - 23:16:41 PDT)
[AMBER] facing problem in 3DRISM
- Tyler Luchko (Lists) (Fri Aug 28 2020 - 07:26:41 PDT)
- angad sharma (Fri Aug 28 2020 - 05:27:59 PDT)
[AMBER] FATAL atom does not have a type crispr cas9 pdb
- David A Case (Mon Aug 31 2020 - 05:04:18 PDT)
- Jisha B (Sat Aug 29 2020 - 20:37:47 PDT)
[AMBER] Fatal error atom type work around
- David A Case (Mon Aug 31 2020 - 12:53:01 PDT)
- Ayesha Fatima (Mon Aug 31 2020 - 04:32:19 PDT)
[AMBER] Fatal error on running GAMESS for parameters of FE ion
- gagandeep singh (Thu Aug 06 2020 - 08:59:52 PDT)
[AMBER] Few workflow-LIE
- Neha Gandhi (Tue Aug 18 2020 - 06:15:04 PDT)
[AMBER] fixatomorder
- Daniel Roe (Tue Aug 04 2020 - 07:27:20 PDT)
[AMBER] Force Field
- David A Case (Fri Aug 21 2020 - 09:47:47 PDT)
- Bill Ross (Fri Aug 21 2020 - 07:11:30 PDT)
- Bowleg, Jerrano (Fri Aug 21 2020 - 07:08:07 PDT)
- ankita mehta (Fri Aug 21 2020 - 07:03:21 PDT)
[AMBER] Fundamentals of LEaP Tutorial
- Maria Nagan (Tue Aug 25 2020 - 05:56:47 PDT)
- Gustaf Olsson (Tue Aug 25 2020 - 05:36:19 PDT)
[AMBER] GlycoTools Webinar tomorrow
- Lachele Foley (Thu Aug 13 2020 - 07:34:28 PDT)
[AMBER] gnuplot
- Rodrigo Galindo-Murillo (Wed Aug 05 2020 - 08:38:43 PDT)
- MYRIAN TORRES RICO (Wed Aug 05 2020 - 04:23:31 PDT)
- Dr. Anselm Horn (Wed Aug 05 2020 - 02:50:48 PDT)
- MYRIAN TORRES RICO (Wed Aug 05 2020 - 01:25:03 PDT)
[AMBER] Help for building cross linking polymer using graphic antechamber
- David A Case (Thu Aug 27 2020 - 05:10:01 PDT)
- Pinky Mazumder (Wed Aug 26 2020 - 13:17:45 PDT)
- Pinky Mazumder (Wed Aug 26 2020 - 13:16:26 PDT)
[AMBER] Help for building two different salt concentration system using tLeap module
- Matias Machado (Thu Aug 27 2020 - 07:33:09 PDT)
- Fulbabu Sk (Thu Aug 27 2020 - 05:55:29 PDT)
[AMBER] Help with MDCRD file for calculating binding energy
- Ram Koganti (Fri Aug 07 2020 - 18:36:34 PDT)
[AMBER] how to calculate net charge of "molecule" using the command "netCharge"
- Billiot, Eugene (Mon Aug 03 2020 - 11:33:59 PDT)
- David A Case (Mon Aug 03 2020 - 07:07:11 PDT)
- Bill Ross (Sun Aug 02 2020 - 17:44:43 PDT)
- Billiot, Eugene (Sun Aug 02 2020 - 16:40:27 PDT)
[AMBER] How to deal with oxygen atom on Fe=O of Compound I (heme enzyme) using MCPB tool
- Mohamed M. Aboelnga (Sun Aug 23 2020 - 08:31:58 PDT)
[AMBER] How to deal with oxygen atom on Fe=O of Compound I (heme enzyme, P450)
- Vaibhav Dixit (Wed Aug 19 2020 - 06:56:04 PDT)
- Mohamed M. Aboelnga (Wed Aug 19 2020 - 06:20:40 PDT)
- Vaibhav Dixit (Tue Aug 18 2020 - 23:11:21 PDT)
- Mohamed M. Aboelnga (Tue Aug 18 2020 - 09:10:11 PDT)
[AMBER] How to make amber/antechamber type mol2 from syble mol2
- Nikhil Maroli (Wed Aug 05 2020 - 00:05:03 PDT)
[AMBER] How to select groups for energy calculations-CPPtraj
- Nikhil Maroli (Sun Aug 30 2020 - 12:44:25 PDT)
[AMBER] implicit solvent calculations with calcium ion
- Bill Ross (Thu Aug 06 2020 - 04:53:24 PDT)
- David A Case (Thu Aug 06 2020 - 04:46:30 PDT)
- Piotr Fajer (Wed Aug 05 2020 - 17:56:06 PDT)
[AMBER] Issue about "... . RESTARTED DUE TO LINMIN FAILURE..." (???)
- 辛志宏 (Mon Aug 03 2020 - 18:59:17 PDT)
- David A Case (Mon Aug 03 2020 - 07:16:16 PDT)
- 辛志宏 (Sun Aug 02 2020 - 21:04:16 PDT)
[AMBER] Issue heating system in equilibration step
- Samuel A. Ratliff (Thu Aug 06 2020 - 09:58:04 PDT)
[AMBER] Lipid bilayer imaging problem
- Daniel Roe (Tue Aug 04 2020 - 07:29:01 PDT)
[AMBER] Missing (ATTN, need revision) and poor parameters (high penalty score) for small molecule parameters and hard time with paramfit
- David Cerutti (Sun Aug 23 2020 - 15:06:46 PDT)
- Állan Ferrari (Sat Aug 22 2020 - 13:59:45 PDT)
[AMBER] MMPBSA.py with saline environment
- Camila Clemente (Fri Aug 28 2020 - 15:41:09 PDT)
- Elvis Martis (Thu Aug 27 2020 - 20:27:46 PDT)
- Camila Clemente (Thu Aug 27 2020 - 10:21:20 PDT)
- Elvis Martis (Thu Aug 27 2020 - 07:56:38 PDT)
- Camila Clemente (Thu Aug 27 2020 - 07:10:24 PDT)
[AMBER] new to amber20
- David A Case (Mon Aug 31 2020 - 05:19:30 PDT)
- aishen (Sun Aug 30 2020 - 00:53:16 PDT)
[AMBER] no collective variables output for infe=1 and abfqmmm
- FLORA, JOSEPH (Mon Aug 17 2020 - 18:52:20 PDT)
[AMBER] novel residue from Glutamine
- Dr. Anselm Horn (Tue Aug 25 2020 - 08:17:34 PDT)
- alex rayevsky (Tue Aug 25 2020 - 05:24:29 PDT)
[AMBER] Number of atoms in the coordinate file does not match the parm file when assigning ntwprt value
- Bill Ross (Tue Aug 18 2020 - 04:36:07 PDT)
- 李奕言 (Tue Aug 18 2020 - 04:31:47 PDT)
- Qinghua Liao (Sun Aug 16 2020 - 02:26:54 PDT)
- Bill Ross (Sun Aug 16 2020 - 01:56:15 PDT)
- Bill Ross (Sun Aug 16 2020 - 01:27:22 PDT)
- 李奕言 (Sun Aug 16 2020 - 01:21:50 PDT)
- Bill Ross (Sat Aug 15 2020 - 21:21:03 PDT)
- 李奕言 (Sat Aug 15 2020 - 21:00:28 PDT)
[AMBER] open valence problem
- Ayesha Fatima (Thu Aug 06 2020 - 06:41:56 PDT)
- Ayesha Fatima (Thu Aug 06 2020 - 05:04:23 PDT)
- Ayesha Fatima (Thu Aug 06 2020 - 04:10:35 PDT)
- David A Case (Tue Aug 04 2020 - 18:44:32 PDT)
- Ayesha Fatima (Tue Aug 04 2020 - 07:34:19 PDT)
[AMBER] Parmed: Residues cannot be part of 2 molecules! Molecule section will not be correctly set.
- Samuel A. Ratliff (Fri Aug 07 2020 - 08:34:26 PDT)
- David A Case (Thu Aug 06 2020 - 13:30:16 PDT)
- Samuel A. Ratliff (Thu Aug 06 2020 - 10:10:58 PDT)
[AMBER] plumed does not work with pmemd.cuda but it works with sander
- viktor drobot (Wed Aug 26 2020 - 12:07:10 PDT)
- Dmitry Karlov (Wed Aug 26 2020 - 12:04:11 PDT)
[AMBER] preparing complexes
- David A Case (Tue Aug 18 2020 - 05:27:46 PDT)
- neildancer (Mon Aug 17 2020 - 20:18:11 PDT)
- Ayesha Fatima (Mon Aug 17 2020 - 13:25:14 PDT)
[AMBER] Problem about ADP-Protein complex simulation
- neildancer.sina.com (Sat Aug 08 2020 - 06:58:49 PDT)
[AMBER] problem in 3DRISM
- David A Case (Fri Aug 07 2020 - 08:18:15 PDT)
- ATUL KUMAR (Fri Aug 07 2020 - 06:59:41 PDT)
- angad sharma (Fri Aug 07 2020 - 06:32:51 PDT)
[AMBER] Problem installing AmberMD with MPI support on Cray XC40
- Jakub Jalowiec (Wed Aug 12 2020 - 01:33:01 PDT)
- Daniel Roe (Tue Aug 04 2020 - 06:32:11 PDT)
[AMBER] Problem with MMPBSA.py
- David A Case (Mon Aug 24 2020 - 05:04:08 PDT)
- Elvis Martis (Sun Aug 23 2020 - 22:37:58 PDT)
- Elvis Martis (Sun Aug 23 2020 - 22:36:06 PDT)
- Camila Clemente (Sun Aug 23 2020 - 21:23:36 PDT)
[AMBER] Problems with MC barostat
- Gomez, Yessica (Fri Jul 31 2020 - 17:51:23 PDT)
[AMBER] Questions (and a small bug report) about SIRAH in Amber
- Charo del Genio (Sat Aug 29 2020 - 06:52:09 PDT)
- Matias Machado (Fri Aug 28 2020 - 09:57:40 PDT)
- Charo del Genio (Wed Aug 26 2020 - 08:38:37 PDT)
- Matias Machado (Wed Aug 26 2020 - 08:27:43 PDT)
- Charo del Genio (Wed Aug 26 2020 - 06:57:38 PDT)
- Matias Machado (Wed Aug 26 2020 - 06:07:09 PDT)
- Charo del Genio (Wed Aug 26 2020 - 02:22:59 PDT)
- David A Case (Mon Aug 24 2020 - 11:40:06 PDT)
- paraw (Mon Aug 24 2020 - 09:45:37 PDT)
- Matias Machado (Mon Aug 24 2020 - 09:09:09 PDT)
- paraw (Mon Aug 24 2020 - 08:19:42 PDT)
- Matias Machado (Mon Aug 24 2020 - 07:26:57 PDT)
- David A Case (Fri Aug 21 2020 - 19:06:09 PDT)
- Scott Brozell (Fri Aug 21 2020 - 18:21:46 PDT)
- Charo del Genio (Fri Aug 21 2020 - 13:43:18 PDT)
[AMBER] Reduced Performance with pmemd.cuda Compared With Benchmarks.
- David A Case (Thu Aug 06 2020 - 04:52:31 PDT)
- Bill Ross (Thu Aug 06 2020 - 02:15:36 PDT)
- David Cerutti (Thu Aug 06 2020 - 02:11:29 PDT)
- Bill Ross (Thu Aug 06 2020 - 02:08:33 PDT)
- David Cerutti (Thu Aug 06 2020 - 02:03:07 PDT)
- David Cerutti (Thu Aug 06 2020 - 02:02:27 PDT)
- Bill Ross (Wed Aug 05 2020 - 23:52:10 PDT)
- 李奕言 (Wed Aug 05 2020 - 23:43:57 PDT)
- David Cerutti (Wed Aug 05 2020 - 19:48:36 PDT)
- 李奕言 (Wed Aug 05 2020 - 18:58:58 PDT)
- David Cerutti (Mon Aug 03 2020 - 21:40:51 PDT)
- 李奕言 (Sun Aug 02 2020 - 20:21:55 PDT)
[AMBER] Regarding RMSD calculation and Clustering
- Daniel Roe (Tue Aug 04 2020 - 07:54:54 PDT)
[AMBER] Regarding the backup of amber nc files
- David A Case (Mon Aug 03 2020 - 07:25:23 PDT)
- Bill Ross (Sun Aug 02 2020 - 23:19:03 PDT)
- Jenny 148 (Sun Aug 02 2020 - 22:44:34 PDT)
[AMBER] Request .nc to MMPBSA.py?
- Elvis Martis (Tue Aug 25 2020 - 20:03:44 PDT)
- Camila Clemente (Tue Aug 25 2020 - 11:28:17 PDT)
- Elvis Martis (Mon Aug 24 2020 - 11:18:20 PDT)
- Camila Mara Clemente (Mon Aug 24 2020 - 11:16:36 PDT)
- Elvis Martis (Mon Aug 24 2020 - 11:06:29 PDT)
- Camila Clemente (Mon Aug 24 2020 - 10:55:59 PDT)
- Elvis Martis (Mon Aug 24 2020 - 10:49:45 PDT)
- Camila Mara Clemente (Mon Aug 24 2020 - 10:38:37 PDT)
[AMBER] Running Paramfit with 300 + structures
- David Cerutti (Fri Aug 14 2020 - 15:36:18 PDT)
- Robin Betz (Fri Aug 14 2020 - 15:12:12 PDT)
- Samuel Himes (Fri Aug 14 2020 - 14:58:14 PDT)
[AMBER] Stripping Protocol in Cpptraj
- An Ta (Thu Aug 27 2020 - 12:50:39 PDT)
[AMBER] Structure Artifact After Autoimage
- Daniel Roe (Tue Aug 04 2020 - 06:25:10 PDT)
[AMBER] Time numbering problem with constant-pH simulations
- Daniel Roe (Wed Aug 26 2020 - 06:47:13 PDT)
- Jonee Lillard (Wed Aug 26 2020 - 06:03:25 PDT)
- Daniel Roe (Tue Aug 25 2020 - 12:22:47 PDT)
- Jonee Lillard (Tue Aug 25 2020 - 08:30:35 PDT)
- Jonee Lillard (Tue Aug 25 2020 - 08:22:01 PDT)
- Daniel Roe (Mon Aug 24 2020 - 17:57:07 PDT)
- Daniel Roe (Mon Aug 24 2020 - 16:57:44 PDT)
- Jonee Lillard (Sat Aug 22 2020 - 06:04:50 PDT)
- Daniel Roe (Tue Aug 18 2020 - 06:02:47 PDT)
- Jonee Lillard (Sat Aug 15 2020 - 07:31:14 PDT)
[AMBER] tleap error
- David A Case (Wed Aug 12 2020 - 12:30:40 PDT)
- ankita mehta (Wed Aug 12 2020 - 09:43:03 PDT)
[AMBER] tleap.in error
- Matias Machado (Fri Aug 07 2020 - 06:26:46 PDT)
- Ayesha Fatima (Fri Aug 07 2020 - 06:14:08 PDT)
- Matias Machado (Fri Aug 07 2020 - 06:00:06 PDT)
- Scott Brozell (Thu Aug 06 2020 - 13:26:11 PDT)
- David A Case (Thu Aug 06 2020 - 13:22:47 PDT)
- Ayesha Fatima (Thu Aug 06 2020 - 09:41:19 PDT)
[AMBER] Tracking lifetime distance by closest of specific water IDs?
- Daniel Roe (Tue Aug 04 2020 - 06:28:49 PDT)
[AMBER] trouble with pdb4amber
- Mattia Cavallaro (Sat Aug 22 2020 - 05:25:57 PDT)
- Hai Nguyen (Fri Aug 21 2020 - 19:33:42 PDT)
- David A Case (Fri Aug 21 2020 - 09:59:07 PDT)
- viktor drobot (Fri Aug 21 2020 - 07:33:39 PDT)
- Bill Ross (Fri Aug 21 2020 - 07:15:52 PDT)
- Mattia Cavallaro (Fri Aug 21 2020 - 07:10:45 PDT)
[AMBER] Tutorial B0
- Gustaf Olsson (Thu Aug 27 2020 - 00:52:38 PDT)
[AMBER] Unable to complete heating stage
- Ramanathan Rajesh (Thu Aug 27 2020 - 10:56:05 PDT)
- Adrian Roitberg (Thu Aug 27 2020 - 10:00:30 PDT)
- Ramanathan Rajesh (Thu Aug 27 2020 - 10:37:54 PDT)
[AMBER] Usage of the Density Peaks Algorithm.
- Daniel Roe (Tue Aug 04 2020 - 08:13:19 PDT)
[AMBER] Using cpptraj to generate rst7 files from trajectory
- Liao (Wed Aug 12 2020 - 11:25:08 PDT)
- Daniel Roe (Wed Aug 12 2020 - 09:04:40 PDT)
- Liao (Wed Aug 12 2020 - 08:59:53 PDT)
- Daniel Roe (Wed Aug 12 2020 - 06:20:12 PDT)
- Gustaf Olsson (Tue Aug 11 2020 - 22:57:44 PDT)
- Liao (Tue Aug 11 2020 - 14:47:47 PDT)
[AMBER] weird energy histograms with REMD
- Christina Bergonzo (Wed Aug 05 2020 - 06:47:31 PDT)
- Daniel Roe (Wed Aug 05 2020 - 06:15:14 PDT)
- Diego Morone (Wed Aug 05 2020 - 05:53:44 PDT)
- koushik kasavajhala (Wed Aug 05 2020 - 05:43:03 PDT)
- Diego Morone (Wed Aug 05 2020 - 05:35:04 PDT)
[AMBER] 转发: Amber20 install problem （Geng Dong）
- David A Case (Wed Aug 19 2020 - 19:00:31 PDT)
- David A Case (Tue Aug 18 2020 - 19:28:34 PDT)
- 东庚 (Tue Aug 18 2020 - 18:25:04 PDT)
covalent molecule and modified residue parameters
- David A Case (Thu Aug 27 2020 - 18:03:23 PDT)
- Sarah Jane (Thu Aug 27 2020 - 12:44:59 PDT)

Amber Archive Aug 2020 by subject