Re: [AMBER] conversion of tripose mol2 to amber type

From: David A Case <>
Date: Wed, 5 Aug 2020 16:07:20 -0400

On Wed, Aug 05, 2020, Nikhil Maroli wrote:

>we have made small individual unit and parameterised it with antechamber.
>Now we need to convert the simple mol2 file which is in sybyl mol2 format
>to amber atom type format. In amber type aromatic carbon is represented as
>ca, carboxy as c...

Sounds like you may just need a simple perl or python (or even sed) script to
change the atom types from what you have to what you want. Would that work?


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Received on Wed Aug 05 2020 - 13:30:03 PDT
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