On Mon, Aug 31, 2020, Aashish Bhatt wrote:
>
>I have tried to prepare a force field parameter for azobenzene with
>conjugated peptide.
>In the RN=NR bond, antechamber is naming as a dummy(DU) in the mol2 file.
>As I checked in the parm10.dat file I think the name is N* but I am not
>sure can you help me with the naming system.
Can you provide the antechamber command line you are using, along with
the input PDB file?
...thx...dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Aug 31 2020 - 13:00:03 PDT