Re: [AMBER] Problem with

From: David A Case <>
Date: Mon, 24 Aug 2020 08:04:08 -0400

On Mon, Aug 24, 2020, Camila Clemente wrote:
>source /users/cclemente/amber20_src/amber.s

It's not just the missing "h" here. The file you want to source will
be in /users/cclemente/amber20:

    source /users/cclemente/amber20/

The line you provided should have given you an error "no such file or

>export AMBERHOME=/users/name/amber_src

The script itself sets AMBERHOME, so you don't want this line,
especially since this is also the wrong location.
>AMBERHOME/AmberTools/src/mmpbsa_py/ .....

This is also the wrong location to run from. You want to use the
version in $AMBERHOME/bin. If you have the correct AMBERHOME variable the
line above would fail, since there is no AmberTools folder inside $AMBERHOME.
Also, with the correct AMBERHOME, will be in your PATH.

...hope this helps....dac

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Received on Mon Aug 24 2020 - 05:30:02 PDT
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