Re: [AMBER] error while running tutorial B5

From: David A Case <>
Date: Sun, 23 Aug 2020 21:39:16 -0400

On Mon, Aug 24, 2020, Ayesha Fatima wrote:
>FATAL: Atom .R<VAL 65>.A<H3 17> does not have a type.

Somehow the program thinks that your VAL 65 is at the N-terminus of a new
chain. Look at the PDB file that is the input for this, and see if you can
figure out what is going on: is there a TER card preceding VAL65, or some
other clue? If you study the leap.log file carefully, you will probably find
a message that says residue 65 is being assigned to NVAL (an N-terminal

We are trying to get people to go through the tutorials, which can easily get
out of date. But see if you can figure out what is going on. Did you do
anything different from what was described on the web site?


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Received on Sun Aug 23 2020 - 19:00:02 PDT
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