Amber Archive Apr 2021: by subject

"No module named pytraj" during make test step
- Hai Nguyen (Sat Apr 17 2021 - 22:14:43 PDT)
- 石谷沁 (Thu Apr 15 2021 - 23:27:01 PDT)
- 石谷沁 (Thu Apr 15 2021 - 22:55:45 PDT)
- Hai Nguyen (Thu Apr 15 2021 - 21:40:25 PDT)
- 石谷沁 (Thu Apr 15 2021 - 20:31:59 PDT)
- 石谷沁 (Thu Apr 15 2021 - 20:25:23 PDT)
- 石谷沁 (Thu Apr 15 2021 - 20:02:47 PDT)
[AMBER] "No module named pytraj" during make test step
- Hai Nguyen (Thu Apr 15 2021 - 11:38:54 PDT)
- David A Case (Thu Apr 15 2021 - 05:22:43 PDT)
- 石谷沁 (Thu Apr 15 2021 - 00:56:57 PDT)
- 石谷沁 (Wed Apr 14 2021 - 18:33:18 PDT)
[AMBER] .rst file not produced during production run
- Roberts, Amy L2 (Wed Apr 21 2021 - 14:16:42 PDT)
- David A Case (Fri Apr 16 2021 - 14:01:29 PDT)
- Roberts, Amy L2 (Fri Apr 16 2021 - 12:04:57 PDT)
- Carlos Simmerling (Wed Apr 14 2021 - 10:02:06 PDT)
- Roberts, Amy L2 (Wed Apr 14 2021 - 09:51:07 PDT)
[AMBER] 2.5 fs integration time step
- Carlos Simmerling (Tue Apr 20 2021 - 12:51:07 PDT)
- h_sahakyan.mb.sci.am (Mon Apr 19 2021 - 23:13:34 PDT)
- Carlos Simmerling (Mon Apr 19 2021 - 06:02:59 PDT)
- h_sahakyan.mb.sci.am (Mon Apr 19 2021 - 05:48:25 PDT)
[AMBER] [EXTERNAL] Release of AmberTools21
- Azurmendi, Hugo (Fri Apr 30 2021 - 13:33:05 PDT)
[AMBER] About cpptraj (v18) extracting temperature trajectory from REMD trajectory
- Daniel Roe (Fri Apr 30 2021 - 08:33:52 PDT)
- Ojet (Thu Apr 29 2021 - 21:02:49 PDT)
[AMBER] About REMD extracting temperature trajectory
- Daniel Roe (Fri Apr 16 2021 - 06:45:53 PDT)
- Ojet (Thu Apr 15 2021 - 19:32:57 PDT)
[AMBER] Add molecule to prmtop/inpcrd ?
- David A Case (Wed Apr 07 2021 - 13:47:03 PDT)
- Gustavo Seabra (Wed Apr 07 2021 - 12:29:17 PDT)
- Daniel Roe (Wed Apr 07 2021 - 07:31:42 PDT)
- Matias Machado (Wed Apr 07 2021 - 06:30:28 PDT)
- Gustavo Seabra (Tue Apr 06 2021 - 14:26:19 PDT)
[AMBER] Adventures installing AMBER 20 in Centos 7
- Kevin Keane (Thu Apr 29 2021 - 20:27:55 PDT)
- Gerald Monard (Thu Apr 29 2021 - 19:55:22 PDT)
- David A Case (Thu Apr 29 2021 - 12:48:16 PDT)
- David A Case (Thu Apr 29 2021 - 11:29:49 PDT)
- Azurmendi, Hugo (Thu Apr 29 2021 - 08:59:40 PDT)
[AMBER] AMBER Digest, Vol 3336, Issue 1
- Daniel Roe (Fri Apr 23 2021 - 09:33:55 PDT)
- waleed zalloum (Sat Apr 17 2021 - 13:01:10 PDT)
[AMBER] Amber Experts
- A. Bakheit (Sun Apr 18 2021 - 03:52:40 PDT)
[AMBER] AMBER installation on multiple computers
- Gustaf Olsson (Mon Apr 26 2021 - 02:33:02 PDT)
- Ravi Abrol (Mon Apr 26 2021 - 01:12:22 PDT)
[AMBER] amber manual - non-bonded terms
- Jutta Rogal (Mon Apr 19 2021 - 08:34:47 PDT)
[AMBER] Amber Tool
- Sangita Kachhap (Mon Apr 19 2021 - 10:12:50 PDT)
- Carlos Simmerling (Mon Apr 19 2021 - 10:07:59 PDT)
- Sangita Kachhap (Mon Apr 19 2021 - 09:54:59 PDT)
[AMBER] AMBER/EVB
- Dusanka Golo (Mon Apr 26 2021 - 06:10:41 PDT)
[AMBER] Antechamber and mol2 file with .<TRIPOS>UNITY_ATOM_ATTR
- Alan (Mon Apr 19 2021 - 03:40:47 PDT)
- Scott Brozell (Fri Apr 16 2021 - 19:03:52 PDT)
[AMBER] Apply Lennar-Jones potential between small molecules
- Jaime Rubio Martinez (Wed Apr 28 2021 - 01:51:55 PDT)
- David A Case (Sun Apr 11 2021 - 06:16:03 PDT)
- A R (Sat Apr 10 2021 - 05:01:58 PDT)
- David A Case (Fri Apr 09 2021 - 18:14:05 PDT)
- A R (Fri Apr 09 2021 - 09:46:14 PDT)
[AMBER] Calculation halted on pmemd.cuda
- 库米尔 (Fri Apr 09 2021 - 09:44:04 PDT)
[AMBER] chromophore file.
- David A Case (Sun Apr 11 2021 - 06:22:21 PDT)
- David Gae (Sat Apr 10 2021 - 23:44:22 PDT)
[AMBER] Citation for LEaP
- David A Case (Wed Apr 28 2021 - 04:50:52 PDT)
- Robert Molt (Tue Apr 27 2021 - 16:52:43 PDT)
[AMBER] cleaning after installation
- David A Case (Tue Apr 06 2021 - 18:26:25 PDT)
- Thomas Gaillard (Tue Apr 06 2021 - 08:23:44 PDT)
[AMBER] Compile Amber20 with SGI/MPT 2.20
- Gabriel Cretin (Tue Apr 27 2021 - 06:32:54 PDT)
- Gerald Monard (Tue Apr 27 2021 - 04:46:53 PDT)
- Gabriel Cretin (Tue Apr 27 2021 - 03:56:53 PDT)
[AMBER] Covalent bonded inhibitors and mm-pb(gb)sa analys
- Carlos Simmerling (Mon Apr 26 2021 - 13:20:05 PDT)
- Hector A. Baldoni (Mon Apr 26 2021 - 12:58:23 PDT)
[AMBER] cpptraj atom definition bug found during RMSD/distance calculation?
- Daniel Roe (Mon Apr 12 2021 - 06:26:52 PDT)
- Liao (Fri Apr 09 2021 - 13:39:38 PDT)
[AMBER] CPPTRAJ configuration is failing
- David A Case (Wed Apr 28 2021 - 13:24:51 PDT)
- Markus Metz (Wed Apr 28 2021 - 12:04:56 PDT)
[AMBER] cpptraj energy using 2 masks
- German P. Barletta (Fri Apr 30 2021 - 12:44:12 PDT)
- Daniel Roe (Fri Apr 30 2021 - 08:32:09 PDT)
- German P. Barletta (Thu Apr 29 2021 - 11:01:07 PDT)
[AMBER] Cyclic Peptides: leap keeps adding missing atoms
- Dr. Anselm Horn (Thu Apr 15 2021 - 17:08:48 PDT)
- Tainah Dorina Marforio (Thu Apr 15 2021 - 03:34:07 PDT)
[AMBER] D-amino acid library
- Carlos Simmerling (Fri Apr 02 2021 - 14:18:36 PDT)
- gard nelson (Fri Apr 02 2021 - 13:26:30 PDT)
- Carlos Simmerling (Fri Apr 02 2021 - 11:47:56 PDT)
- gard nelson (Fri Apr 02 2021 - 11:14:50 PDT)
[AMBER] Discrepancy in experimental and MMPBSA pattern of
- Matthew Guberman-Pfeffer (Tue Apr 06 2021 - 12:06:43 PDT)
[AMBER] Discrepancy in experimental and MMPBSA pattern of binding energy
- David A Case (Mon Apr 12 2021 - 05:59:49 PDT)
- Manisha (Sun Apr 11 2021 - 22:50:16 PDT)
- Manisha (Tue Apr 06 2021 - 23:27:30 PDT)
- Adrian Roitberg (Tue Apr 06 2021 - 08:54:22 PDT)
- Manisha (Tue Apr 06 2021 - 07:55:56 PDT)
[AMBER] Distance restraints not working
- jacob wick (Thu Apr 22 2021 - 14:27:04 PDT)
- David A Case (Tue Apr 20 2021 - 05:05:32 PDT)
- jacob wick (Mon Apr 19 2021 - 02:10:44 PDT)
[AMBER] Distance tolerance for identifying common atoms in thermodynamics integration
- zz sheng (Mon Apr 05 2021 - 08:00:43 PDT)
[AMBER] Erro installing AMBER18 with RTX3070 and CUDA 10.2 and NVIDIA 460.67 driver
- Giorgos Lambrinidis (Fri Apr 09 2021 - 04:09:23 PDT)
[AMBER] Error in using ambpdb to convert rst to pdb
- David A Case (Wed Apr 21 2021 - 08:37:36 PDT)
- Suchetana Gupta (Wed Apr 21 2021 - 07:41:23 PDT)
[AMBER] Error installing AMBER18 with RTX3070 and CUDA 10.2 and NVIDIA 460.67 driver
- Giorgos Lambrinidis (Fri Apr 09 2021 - 09:03:24 PDT)
- Ross Walker (Fri Apr 09 2021 - 06:14:09 PDT)
- Giorgos Lambrinidis (Fri Apr 09 2021 - 04:47:22 PDT)
[AMBER] error installing parallel amber
- Ayesha Fatima (Thu Apr 22 2021 - 01:51:29 PDT)
[AMBER] Error using MCPB
- Maschietto, Federica (Wed Apr 07 2021 - 08:08:02 PDT)
[AMBER] Error when using 1DRISM to generate .xvv organic solvent files
- Daniel Fowles (Wed Apr 21 2021 - 01:33:29 PDT)
[AMBER] error while building non-GPU accelerated mpi version of amber
- David A Case (Thu Apr 01 2021 - 06:08:38 PDT)
- Homeo Morphism (Thu Apr 01 2021 - 04:35:12 PDT)
[AMBER] example files for the hcp option for GB
- David A Case (Thu Apr 01 2021 - 06:30:49 PDT)
[AMBER] force field balance vs accuracy
- Vaibhav Dixit (Mon Apr 05 2021 - 09:10:52 PDT)
- Carlos Simmerling (Mon Apr 05 2021 - 08:31:33 PDT)
- Brent Krueger (Mon Apr 05 2021 - 08:11:47 PDT)
[AMBER] Forcefield File and Adding My Own Polymer Unit
- David A Case (Fri Apr 23 2021 - 18:19:28 PDT)
- Swisher, Justin S (Fri Apr 23 2021 - 12:00:47 PDT)
[AMBER] Forcefield loading order and water parameters
- Gustaf Olsson (Thu Apr 15 2021 - 00:00:16 PDT)
- Kellon Belfon (Wed Apr 14 2021 - 13:55:41 PDT)
- Reza Esmaeeli (Wed Apr 14 2021 - 10:24:26 PDT)
[AMBER] Gaussian derived RESP charges and antechamber
- Kenneth Huang (Wed Apr 28 2021 - 08:50:09 PDT)
- Gustaf Olsson (Wed Apr 28 2021 - 05:48:59 PDT)
- Hector A. Baldoni (Wed Apr 28 2021 - 05:30:24 PDT)
- Gustaf Olsson (Wed Apr 28 2021 - 03:30:13 PDT)
[AMBER] Great news!
- Matias Machado (Fri Apr 02 2021 - 14:14:55 PDT)
- Piotr Fajer (Thu Apr 01 2021 - 14:08:58 PDT)
- James Kress (Thu Apr 01 2021 - 14:06:59 PDT)
- Karl Kirschner (Thu Apr 01 2021 - 08:26:09 PDT)
- Gordon Richard Chalmers (Thu Apr 01 2021 - 08:18:02 PDT)
- andrea.cavalli.irb.usi.ch (Thu Apr 01 2021 - 08:10:23 PDT)
- Ross Walker (Thu Apr 01 2021 - 08:05:58 PDT)
- Adrian Roitberg (Thu Apr 01 2021 - 07:51:14 PDT)
[AMBER] Hack to install AmberTools20 on macOS
- Gustaf Olsson (Mon Apr 19 2021 - 23:44:36 PDT)
- David A Case (Mon Apr 19 2021 - 06:27:13 PDT)
- Otto Sievert (Sun Apr 18 2021 - 18:45:36 PDT)
[AMBER] halted quasi-harmonic MMPBSA calculation
- Vaibhav Dixit (Sat Apr 17 2021 - 08:35:44 PDT)
[AMBER] Heat Output File Issue
- David A Case (Fri Apr 02 2021 - 17:34:49 PDT)
- Swisher, Justin S (Fri Apr 02 2021 - 12:35:35 PDT)
[AMBER] Heating stages ntx = 1 or ntx=5
- Jenny 148 (Wed Apr 28 2021 - 06:23:26 PDT)
[AMBER] Help for NETCDF Error :Input/Output error
- 余鸿艳 (Wed Apr 07 2021 - 04:51:19 PDT)
[AMBER] help with cpptraj error (segmentation fault)
- Daniel Roe (Tue Apr 13 2021 - 06:09:09 PDT)
[AMBER] How to track oxygen molecules in MD
- Markowska (Wed Apr 14 2021 - 08:27:13 PDT)
- Daniel Roe (Wed Apr 14 2021 - 07:48:05 PDT)
- Damiano Spadoni (Wed Apr 14 2021 - 07:16:14 PDT)
- Damiano Spadoni (Tue Apr 13 2021 - 07:17:16 PDT)
- Daniel Roe (Tue Apr 13 2021 - 06:48:04 PDT)
- Markowska (Mon Apr 12 2021 - 10:12:06 PDT)
- Damiano Spadoni (Mon Apr 12 2021 - 09:51:01 PDT)
[AMBER] installation of AmberTools 21
- David A Case (Fri Apr 30 2021 - 12:54:46 PDT)
- Qinghua Liao (Fri Apr 30 2021 - 10:54:32 PDT)
- David A Case (Fri Apr 30 2021 - 09:17:51 PDT)
- Qinghua Liao (Fri Apr 30 2021 - 07:54:17 PDT)
[AMBER] Make the two ligands independent in one simulation
- Gustavo Seabra (Mon Apr 26 2021 - 11:51:29 PDT)
- 李明玉 (Fri Apr 23 2021 - 19:47:05 PDT)
- James Kress (Fri Apr 23 2021 - 12:00:52 PDT)
- 李明玉 (Fri Apr 23 2021 - 08:00:38 PDT)
- 李明玉 (Fri Apr 23 2021 - 07:18:35 PDT)
[AMBER] Max relative errors questions in parallel and cuda.serial test
- David A Case (Sat Apr 24 2021 - 06:32:15 PDT)
- 石谷沁 (Wed Apr 21 2021 - 19:56:57 PDT)
- 石谷沁 (Wed Apr 21 2021 - 19:50:16 PDT)
[AMBER] MD Simulation of Ribosome including Protein & RNA
- Carlos Simmerling (Mon Apr 26 2021 - 11:46:01 PDT)
- Shirin Jamshidi (Mon Apr 26 2021 - 11:16:44 PDT)
[AMBER] mmgbsa error
- Ayesha Fatima (Fri Apr 23 2021 - 09:07:11 PDT)
[AMBER] mmgbsa issue
- Ayesha Fatima (Sat Apr 24 2021 - 03:04:22 PDT)
- David A Case (Fri Apr 23 2021 - 18:21:29 PDT)
- Ayesha Fatima (Fri Apr 23 2021 - 08:45:12 PDT)
[AMBER] MMPBSA per residue decomposition - Calculation speed
- David A Case (Thu Apr 08 2021 - 05:17:48 PDT)
- Kashyap, Jatin (Wed Apr 07 2021 - 19:02:00 PDT)
- Jatin Kashyap (Mon Apr 05 2021 - 15:33:24 PDT)
- Jatin Kashyap (Fri Apr 02 2021 - 13:43:13 PDT)
- Adrian Roitberg (Fri Apr 02 2021 - 13:30:46 PDT)
- Jatin Kashyap (Fri Apr 02 2021 - 13:23:43 PDT)
[AMBER] molecular-dynamics docking: when everything docks to the receptor's site, how do you deal with it?
- David A Case (Thu Apr 08 2021 - 05:28:08 PDT)
- Homeo Morphism (Thu Apr 08 2021 - 00:34:56 PDT)
[AMBER] moving water away from a residue
- German P. Barletta (Wed Apr 07 2021 - 11:25:33 PDT)
[AMBER] Nonstandard Residue
- Lauren Raguette (Wed Apr 14 2021 - 08:24:26 PDT)
- Fernandez, Joseph P. (Wed Apr 14 2021 - 06:45:21 PDT)
[AMBER] Obtaining 3D structures from Reweighted PMF plots of accelerated MD
- Sruthi Sudhakar (Mon Apr 12 2021 - 03:33:48 PDT)
[AMBER] parmchk vs. parmchk2 for metal-ligand parameterization
- SARAH JEANNE LEFAVE (Wed Apr 07 2021 - 08:00:11 PDT)
[AMBER] parmchk2
- Thomas Cheatham (Thu Apr 22 2021 - 20:50:59 PDT)
- Alesadi, Amirhadi (Thu Apr 22 2021 - 20:26:23 PDT)
[AMBER] PatchingError: .patches/AmberTools20_Unapplied_Patches/update.13 failed to apply. No changes made from this patch
- David A Case (Thu Apr 22 2021 - 05:26:25 PDT)
- David Ricardo Figueroa Blanco (Wed Apr 21 2021 - 15:20:47 PDT)
[AMBER] Per residue free energy decomposition is not working
- ABDUL BASIT (Wed Apr 07 2021 - 08:42:10 PDT)
[AMBER] Per residue free energy is not decomposed correctly
- Abdul Basit (Thu Apr 08 2021 - 10:03:52 PDT)
[AMBER] polarizable FF in amber18 or 20
- Vaibhav Dixit (Thu Apr 29 2021 - 21:03:38 PDT)
[AMBER] Problem with incomplete solvation with tleap
- David A Case (Thu Apr 22 2021 - 11:48:05 PDT)
- Matias Machado (Thu Apr 22 2021 - 09:27:27 PDT)
- Cato, Lee (Thu Apr 22 2021 - 07:43:46 PDT)
[AMBER] Problems to install AmberTools20
- David A Case (Thu Apr 29 2021 - 05:21:53 PDT)
- Miguel Garavís (Thu Apr 29 2021 - 03:43:12 PDT)
- David A Case (Wed Apr 28 2021 - 09:41:07 PDT)
- Miguel Garavís (Wed Apr 28 2021 - 05:14:49 PDT)
- David A Case (Wed Apr 28 2021 - 05:06:55 PDT)
- Miguel Garavís (Wed Apr 28 2021 - 04:33:42 PDT)
[AMBER] Problems when installing AMBER20 on CentOS 7: multiple definition of 'cifpin'
- David A Case (Tue Apr 13 2021 - 05:41:38 PDT)
- 石谷沁 (Mon Apr 12 2021 - 20:48:20 PDT)
[AMBER] Protein dimension
- Daniel Roe (Sun Apr 04 2021 - 07:11:25 PDT)
- Carlos Simmerling (Sat Apr 03 2021 - 06:11:28 PDT)
- Samanta M (Sat Apr 03 2021 - 05:42:45 PDT)
[AMBER] protein sticking out of solvation box causing instability
- Daniel Roe (Thu Apr 22 2021 - 06:32:18 PDT)
- Thomas Cheatham (Wed Apr 21 2021 - 19:52:49 PDT)
- Neville Bethel (Wed Apr 21 2021 - 13:37:59 PDT)
- Kenneth Huang (Tue Apr 20 2021 - 12:32:01 PDT)
- Neville Bethel (Tue Apr 20 2021 - 10:34:53 PDT)
[AMBER] Questions about amber-adding counterions
- Carlos Simmerling (Sun Apr 11 2021 - 03:56:48 PDT)
- 马芳芳 (Sat Apr 10 2021 - 18:54:21 PDT)
[AMBER] Questions about amber-adding counterions (Carlos Simmerling and David A Case)
- 马芳芳 (Mon Apr 12 2021 - 19:13:55 PDT)
[AMBER] Questions about amber-adding counterions (Carlos Simmerling)
- Carlos Simmerling (Mon Apr 12 2021 - 06:08:10 PDT)
- David A Case (Mon Apr 12 2021 - 05:49:35 PDT)
- Carlos Simmerling (Mon Apr 12 2021 - 05:30:02 PDT)
- 马芳芳 (Sun Apr 11 2021 - 17:16:00 PDT)
[AMBER] Questions about Principle Component Analysis
- Thomas Cheatham (Thu Apr 15 2021 - 13:17:00 PDT)
- Li,Haoxi (Thu Apr 15 2021 - 11:56:50 PDT)
[AMBER] Questions about REMD extracting temperature trajectory
- Charo del Genio (Thu Apr 29 2021 - 01:45:46 PDT)
- Ojet (Wed Apr 28 2021 - 23:26:12 PDT)
- Charo del Genio (Sat Apr 24 2021 - 00:10:12 PDT)
- Ojet (Fri Apr 23 2021 - 18:07:20 PDT)
[AMBER] Questions about using the command "lie"
- Marko Sever (Thu Apr 01 2021 - 05:48:02 PDT)
[AMBER] R: Cyclic Peptides: leap keeps adding missing atoms
- Tainah Dorina Marforio (Mon Apr 19 2021 - 07:17:46 PDT)
[AMBER] Regarding the forcefield parameters for cytochrome P450 heme group
- Patil Pranita Uttamrao (Sun Apr 25 2021 - 03:53:50 PDT)
[AMBER] Release of AmberTools21
- Gustaf Olsson (Fri Apr 30 2021 - 06:23:18 PDT)
- David A Case (Fri Apr 30 2021 - 05:26:27 PDT)
- Gustaf Olsson (Fri Apr 30 2021 - 01:55:49 PDT)
- aishen (Thu Apr 29 2021 - 23:15:45 PDT)
- aishen (Thu Apr 29 2021 - 22:56:22 PDT)
- David A Case (Thu Apr 29 2021 - 18:29:34 PDT)
[AMBER] RMSIP
- Daniel Roe (Fri Apr 16 2021 - 12:08:31 PDT)
- Daniel Roe (Fri Apr 16 2021 - 06:50:07 PDT)
- waleed zalloum (Thu Apr 15 2021 - 21:01:28 PDT)
[AMBER] running sander.MPI :forrtl: severe (174): SIGSEGV, segmentation fault occurred
- David A Case (Thu Apr 22 2021 - 05:35:32 PDT)
- 周丽萍 (Wed Apr 21 2021 - 22:13:02 PDT)
- David A Case (Wed Apr 21 2021 - 07:28:16 PDT)
- 周丽萍 (Wed Apr 21 2021 - 05:29:55 PDT)
- David A Case (Wed Apr 21 2021 - 05:13:52 PDT)
- 周丽萍 (Wed Apr 21 2021 - 01:32:23 PDT)
[AMBER] serial amber installation on wsl
- Ayesha Fatima (Fri Apr 23 2021 - 08:35:04 PDT)
- David A Case (Thu Apr 22 2021 - 05:32:01 PDT)
- Ayesha Fatima (Thu Apr 22 2021 - 01:05:02 PDT)
[AMBER] SMD analysing question (Xiaodong)
- Vishal Singh (Tue Apr 13 2021 - 19:23:07 PDT)
- 吴晓东 (Tue Apr 13 2021 - 18:26:04 PDT)
[AMBER] Thermodynamic integration for protein-protein interactions
- WW (Sun Apr 18 2021 - 09:37:40 PDT)
- David A Case (Sat Apr 17 2021 - 13:30:46 PDT)
- WW (Sat Apr 10 2021 - 19:43:48 PDT)
- David A Case (Fri Apr 09 2021 - 05:12:18 PDT)
- WW (Thu Apr 08 2021 - 15:32:04 PDT)
[AMBER] TI error on last window of calculations
- Rafał Madaj (Wed Apr 14 2021 - 01:35:43 PDT)
[AMBER] TI free energy calculation issue after applying smoothstep in Amber20
- zz sheng (Mon Apr 26 2021 - 07:44:14 PDT)
- Abir Ganguly (Mon Apr 26 2021 - 05:19:01 PDT)
- zz sheng (Sun Apr 25 2021 - 20:32:38 PDT)
[AMBER] tleap solvate box problems
- Daniel Roe (Fri Apr 16 2021 - 07:09:44 PDT)
- Gabriel Titchiner (Fri Apr 16 2021 - 01:02:22 PDT)
[AMBER] Trouble Creating a pdb File
- Gustaf Olsson (Wed Apr 28 2021 - 23:40:35 PDT)
- Khong, Megan (Wed Apr 28 2021 - 14:14:36 PDT)
[AMBER] Troubleshooting long idle times in pmemd.MPI
- Kevin Keane (Thu Apr 29 2021 - 20:39:00 PDT)
[AMBER] trpcage benchmark: reduce 32x or dimerize ?
- Carlos Simmerling (Fri Apr 30 2021 - 06:33:32 PDT)
- Scott Brozell (Thu Apr 29 2021 - 18:26:12 PDT)
[AMBER] Umbrella sampling on Amber 18 vs Amber 20
- David A Case (Sat Apr 17 2021 - 13:27:54 PDT)
- Ramin Mehrani (Sat Apr 17 2021 - 10:20:32 PDT)
- David A Case (Sat Apr 17 2021 - 09:47:41 PDT)
- Ramin Mehrani (Sat Apr 17 2021 - 08:59:56 PDT)
[AMBER] unusually high entropy values MMPBSA quasi-harmonic
- David A Case (Tue Apr 20 2021 - 04:58:48 PDT)
- Vaibhav Dixit (Tue Apr 20 2021 - 00:17:26 PDT)
- David A Case (Mon Apr 19 2021 - 11:38:59 PDT)
- Vaibhav Dixit (Mon Apr 19 2021 - 10:18:24 PDT)
- Vaibhav Dixit (Mon Apr 19 2021 - 07:19:04 PDT)
- Adrian Roitberg (Mon Apr 19 2021 - 07:13:39 PDT)
- Vaibhav Dixit (Mon Apr 19 2021 - 07:10:59 PDT)
- David A Case (Mon Apr 19 2021 - 06:18:08 PDT)
- Vaibhav Dixit (Sun Apr 18 2021 - 10:20:59 PDT)
[AMBER] WARNING: INCONSISTENCIES EXIST WITHIN INTERNAL POTENTIAL TERMS. THE VALIDITY OF THESE RESULTS ARE HIGHLY QUESTIONABLE
- 周丽萍 (Fri Apr 23 2021 - 20:28:24 PDT)
[AMBER] Will AmberTool21 support gcc10?
- Gustaf Olsson (Wed Apr 21 2021 - 23:34:17 PDT)
- Daniel Roe (Wed Apr 21 2021 - 07:17:33 PDT)
- Gustaf Olsson (Tue Apr 20 2021 - 02:03:36 PDT)
[AMBER] 答复: Problems when installing AMBER20 on CentOS 7: multiple definition of 'cifpin'
- David A Case (Tue Apr 13 2021 - 05:44:52 PDT)
- Tru Huynh (Tue Apr 13 2021 - 03:04:59 PDT)
- 石谷沁 (Mon Apr 12 2021 - 23:17:53 PDT)
Adventures installing AMBER 20 in Centos 7
- Azurmendi, Hugo (Thu Apr 29 2021 - 13:01:46 PDT)
AMBER Digest, Vol 3348, Issue 1
- Markus Metz (Thu Apr 29 2021 - 12:09:23 PDT)
Max relative errors questions in parallel and cuda.serial test
- David A Case (Thu Apr 29 2021 - 05:09:35 PDT)
- 石谷沁 (Wed Apr 28 2021 - 17:57:46 PDT)
- David A Case (Wed Apr 28 2021 - 04:58:01 PDT)
- 石谷沁 (Tue Apr 27 2021 - 17:54:26 PDT)
- 石谷沁 (Sun Apr 25 2021 - 17:37:13 PDT)
- David A Case (Sun Apr 25 2021 - 05:03:54 PDT)
- 石谷沁 (Sat Apr 24 2021 - 17:37:12 PDT)
答复: Problems when installing AMBER20 on CentOS 7: multiple definition of 'cifpin'
- 石谷沁 (Wed Apr 14 2021 - 03:22:35 PDT)
- Gerald Monard (Tue Apr 13 2021 - 15:49:43 PDT)
- David A Case (Tue Apr 13 2021 - 08:33:49 PDT)
- 石谷沁 (Tue Apr 13 2021 - 06:34:34 PDT)

Amber Archive Apr 2021 by subject