Amber Archive Jan 2004: By Thread

Re: AMBER: Antechamber & Ptraj/Rdparm L Jin (Thu Jan 01 2004 - 02:47:18 PST)
- Re: AMBER: Antechamber & Ptraj/Rdparm zhaoxc.puccini.che.pitt.edu (Thu Jan 01 2004 - 07:05:31 PST)
- Re: AMBER: Antechamber & Ptraj/Rdparm Bill Ross (Thu Jan 01 2004 - 14:26:55 PST)
  - AMBER: Molecular Frame Byungchan Kim (Thu Jan 01 2004 - 19:46:14 PST)
    - Re: AMBER: Molecular Frame David A. Case (Fri Jan 02 2004 - 08:22:10 PST)
    - Re: AMBER: Molecular Frame Byungchan Kim (Fri Jan 02 2004 - 15:03:36 PST)
    - Re: AMBER: Molecular Frame David A. Case (Sat Jan 03 2004 - 07:51:13 PST)
    - Re: AMBER: Molecular Frame Bill Ross (Fri Jan 02 2004 - 15:40:54 PST)
    - Re: AMBER: Molecular Frame Byungchan Kim (Sat Jan 03 2004 - 11:00:20 PST)
AMBER: algorithm used in AMBER A. Hungie (Fri Jan 02 2004 - 02:07:11 PST)
- RE: AMBER: algorithm used in AMBER Ross Walker (Fri Jan 02 2004 - 05:05:13 PST)
AMBER: force field A. Hungie (Fri Jan 02 2004 - 04:28:59 PST)
- RE: AMBER: force field Ross Walker (Fri Jan 02 2004 - 04:55:24 PST)
AMBER: rms in ptraj L Jin (Mon Jan 05 2004 - 06:49:47 PST)
- Re: AMBER: rms in ptraj Thomas E. Cheatham, III (Mon Jan 05 2004 - 08:04:20 PST)
AMBER: File format generated by respgen Lishan Yao (Mon Jan 05 2004 - 08:50:38 PST)
AMBER: prep file Youyi Peng (Mon Jan 05 2004 - 15:40:07 PST)
- Re: AMBER: prep file James W. Caldwell (Mon Jan 05 2004 - 16:01:20 PST)
Re: AMBER: prep file Bill Ross (Mon Jan 05 2004 - 15:49:14 PST)
AMBER: Radius of gyration Bimo Ario Tejo (Mon Jan 05 2004 - 22:14:37 PST)
- Re: AMBER: Radius of gyration Alexey Onufriev (Tue Jan 06 2004 - 10:59:24 PST)
AMBER: Parameters for deuterium Charlie Laughton (Tue Jan 06 2004 - 07:17:46 PST)
- Re: AMBER: Parameters for deuterium David A. Case (Tue Jan 06 2004 - 08:32:14 PST)
AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning Robert Duke (Tue Jan 06 2004 - 12:20:44 PST)
- Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning Andreas Svrcek-Seiler (Wed Jan 07 2004 - 04:12:30 PST)
  - Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning Viktor Hornak (Wed Jan 07 2004 - 05:46:28 PST)
    - Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning Robert Duke (Wed Jan 07 2004 - 06:31:19 PST)
  - Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning Robert Duke (Wed Jan 07 2004 - 06:17:27 PST)
    - Re: AMBER: Intel Fortran Compiler 8.0 / pmemd 3.1 warning David E. Konerding (Wed Jan 07 2004 - 08:16:49 PST)
AMBER: Atom type L Jin (Wed Jan 07 2004 - 03:26:25 PST)
AMBER: strange output of MD L Jin (Wed Jan 07 2004 - 08:42:49 PST)
Re: AMBER: strange output of MD Rhonda Torres (Wed Jan 07 2004 - 09:48:54 PST)
- Re: AMBER: strange output of MD Bill Ross (Wed Jan 07 2004 - 09:57:13 PST)
  - Re: AMBER: strange output of MD L Jin (Wed Jan 07 2004 - 10:21:03 PST)
- Re: AMBER: strange output of MD Bill Ross (Wed Jan 07 2004 - 10:39:35 PST)
Re: AMBER: Atom type Rhonda Torres (Wed Jan 07 2004 - 10:09:17 PST)
- Re: AMBER: Atom type Rhonda Torres (Wed Jan 07 2004 - 10:55:40 PST)
AMBER: .crg file for Delphi a b (Wed Jan 07 2004 - 10:22:34 PST)
AMBER: modeling GPCR in lipid environment Giulio Rastelli (Thu Jan 08 2004 - 08:49:53 PST)
- Re: AMBER: modeling GPCR in lipid environment Alexey Onufriev (Thu Jan 08 2004 - 11:08:01 PST)
AMBER: Minimiation (AMBER5/AMBER7) does not reach the tageted rmsd Anna Schrey (Thu Jan 08 2004 - 02:30:37 PST)
- Re: AMBER: Minimiation (AMBER5/AMBER7) does not reach the tageted rmsd David A. Case (Thu Jan 08 2004 - 16:15:12 PST)
- Re: AMBER: Minimiation (AMBER5/AMBER7) does not reach the tageted rmsd Anna Schrey (Fri Jan 23 2004 - 02:39:47 PST)
AMBER: Vlimit problem Yuqin Cai (Thu Jan 08 2004 - 10:15:38 PST)
- Re: AMBER: Vlimit problem David A. Case (Thu Jan 08 2004 - 16:31:00 PST)
- Re: AMBER: Vlimit problem Thomas E. Cheatham, III (Fri Jan 09 2004 - 13:53:10 PST)
AMBER: running on Itanium machines northrop.chem.ucla.edu (Thu Jan 08 2004 - 11:14:52 PST)
- Re: AMBER: running on Itanium machines David A. Case (Fri Jan 09 2004 - 08:43:48 PST)
  - Re: AMBER: running on Itanium machines northrop.chem.ucla.edu (Fri Jan 09 2004 - 11:28:56 PST)
AMBER: Amber compilation in IBM-SP4 Jiten (Sat Jan 10 2004 - 00:28:12 PST)
- Re: AMBER: Amber compilation in IBM-SP4 David A. Case (Sat Jan 10 2004 - 10:43:06 PST)
AMBER: references? a b (Sun Jan 11 2004 - 06:40:50 PST)
- Re: AMBER: references? Martin Lepsik (Thu Jan 29 2004 - 07:32:23 PST)
AMBER: Improper dihedral Herbert Georg (Mon Jan 12 2004 - 06:23:22 PST)
- Re: AMBER: Improper dihedral Bill Ross (Mon Jan 12 2004 - 11:23:44 PST)
  - Re: AMBER: Improper dihedral Herbert Georg (Mon Jan 12 2004 - 11:39:12 PST)
- Re: AMBER: Improper dihedral Bill Ross (Mon Jan 12 2004 - 11:52:53 PST)
  - Re: AMBER: Improper dihedral Herbert Georg (Mon Jan 12 2004 - 12:21:39 PST)
- Re: AMBER: Improper dihedral David A. Case (Mon Jan 12 2004 - 12:14:22 PST)
  - Re: AMBER: Improper dihedral Herbert Georg (Tue Jan 13 2004 - 07:36:29 PST)
Re: AMBER: Improper dihedral Bill Ross (Mon Jan 12 2004 - 10:21:03 PST)
- Re: AMBER: Improper dihedral Herbert Georg (Mon Jan 12 2004 - 10:57:39 PST)
AMBER: disulfide bonds Wen Li (Mon Jan 12 2004 - 13:56:26 PST)
- Re: AMBER: disulfide bonds David A. Case (Mon Jan 12 2004 - 17:54:48 PST)
  - Re: AMBER: disulfide bonds/ Engineered bishop (Tue Jan 13 2004 - 06:20:19 PST)
  - Re: AMBER: disulfide bonds Wen Li (Tue Jan 13 2004 - 10:13:50 PST)
    - Re: AMBER: disulfide bonds David A. Case (Tue Jan 13 2004 - 10:57:25 PST)
AMBER: error in minimization Itziar Maestre Asenjo (Tue Jan 13 2004 - 07:12:22 PST)
- Re: AMBER: error in minimization David A. Case (Tue Jan 13 2004 - 08:48:50 PST)
  - Re: AMBER: error in minimization Itziar Maestre Asenjo (Wed Jan 14 2004 - 22:58:46 PST)
Re: AMBER: charris5 (Tue Jan 13 2004 - 11:07:33 PST)
- Re: AMBER: Michael George Lerner (Tue Jan 13 2004 - 11:18:57 PST)
AMBER: LEAP - Error loading units Miguel de Federico (Wed Jan 14 2004 - 09:12:29 PST)
AMBER: DMF box Stefano.Pieraccini.unimi.it (Wed Jan 14 2004 - 08:42:02 PST)
Re: AMBER: LEAP - Error loading units Bill Ross (Wed Jan 14 2004 - 11:45:19 PST)
AMBER: "ATTN, need revision" klamothe.uiuc.edu (Wed Jan 14 2004 - 12:07:56 PST)
- Re: AMBER: "ATTN, need revision" Junmei Wang (Wed Jan 14 2004 - 12:39:47 PST)
AMBER: free energy profile calculation Martina Roeselova (Wed Jan 14 2004 - 13:14:48 PST)
- Re: AMBER: free energy profile calculation David Smith (Thu Jan 15 2004 - 06:37:27 PST)
  - Re: AMBER: free energy profile calculation David A. Case (Thu Jan 15 2004 - 08:32:17 PST)
AMBER: NTF L Jin (Fri Jan 16 2004 - 03:15:16 PST)
- Re: AMBER: NTF David A. Case (Fri Jan 16 2004 - 08:09:27 PST)
AMBER: atom type CM Kristina Furse (Fri Jan 16 2004 - 12:37:38 PST)
- Re: AMBER: atom type CM Junmei Wang (Fri Jan 16 2004 - 13:13:19 PST)
- RE: AMBER: atom type CM Kristina Furse (Fri Jan 16 2004 - 13:56:47 PST)
  - RE: AMBER: atom type CM Junmei Wang (Tue Jan 20 2004 - 08:43:23 PST)
Re: AMBER: atom type CM Bill Ross (Fri Jan 16 2004 - 13:17:29 PST)
AMBER: GB and Atom Type Steve Seibold (Tue Jan 20 2004 - 07:34:45 PST)
- Re: AMBER: GB and Atom Type David A. Case (Tue Jan 20 2004 - 15:03:52 PST)
AMBER: Question for PMEMD users Robert Duke (Tue Jan 20 2004 - 08:05:38 PST)
AMBER: restraint tang kwa (Tue Jan 20 2004 - 08:10:39 PST)
- Re: AMBER: restraint David A. Case (Tue Jan 20 2004 - 15:05:59 PST)
AMBER: Parm98 Vs 02 A.Madhumalar (Tue Jan 20 2004 - 08:27:03 PST)
- Re: AMBER: Parm98 Vs 02 David A. Case (Tue Jan 20 2004 - 15:08:57 PST)
  - Re: AMBER: Parm98 Vs 02 A.Madhumalar (Wed Jan 21 2004 - 09:01:31 PST)
AMBER: PDB files Beale, John (Tue Jan 20 2004 - 08:43:36 PST)
- Re: AMBER: PDB files David A. Case (Tue Jan 20 2004 - 15:12:04 PST)
AMBER: Do I need to repeat MD simulation? aini.UMDNJ.EDU (Tue Jan 20 2004 - 15:43:00 PST)
- Re: AMBER: Do I need to repeat MD simulation? Andreas Svrcek-Seiler (Wed Jan 21 2004 - 02:40:17 PST)
  - Re: AMBER: Do I need to repeat MD simulation? Robert Duke (Wed Jan 21 2004 - 05:44:22 PST)
    - Re: AMBER: Do I need to repeat MD simulation? bishop (Wed Jan 21 2004 - 07:14:45 PST)
- Re: AMBER: Do I need to repeat MD simulation? Bill Ross (Wed Jan 21 2004 - 08:01:54 PST)
  - Re: AMBER: Do I need to repeat MD simulation? aini.UMDNJ.EDU (Wed Jan 21 2004 - 10:42:30 PST)
AMBER: segmentation fault in Leap Ioana Cozmuta (Tue Jan 20 2004 - 20:39:28 PST)
Re: AMBER: segmentation fault in Leap Bill Ross (Wed Jan 21 2004 - 01:47:58 PST)
- Re: AMBER: segmentation fault in Leap Ioana Cozmuta (Wed Jan 21 2004 - 21:56:10 PST)
  - Re: AMBER: segmentation fault in Leap David E. Konerding (Thu Jan 22 2004 - 07:22:47 PST)
- Re: AMBER: segmentation fault in Leap Bill Ross (Thu Jan 22 2004 - 09:37:09 PST)
  - Re: AMBER: segmentation fault in Leap Ioana Cozmuta (Thu Jan 22 2004 - 23:26:41 PST)
AMBER: Errors in MM-PBSA??? ML (Wed Jan 21 2004 - 03:46:35 PST)
- Re: AMBER: Errors in MM-PBSA??? Holger Gohlke (Wed Jan 21 2004 - 04:37:39 PST)
AMBER: NMODE via MM-PBSA ML (Wed Jan 21 2004 - 04:03:31 PST)
- Re: AMBER: NMODE via MM-PBSA Holger Gohlke (Wed Jan 21 2004 - 04:49:48 PST)
  - Re: AMBER: NMODE via MM-PBSA ML (Wed Jan 21 2004 - 05:42:29 PST)
AMBER: antechamber and mopac5010mn S. Frank Yan (Wed Jan 21 2004 - 07:37:25 PST)
- Re: AMBER: antechamber and mopac5010mn David A. Case (Wed Jan 21 2004 - 08:41:53 PST)
AMBER: crystal lattice determination Scott Brozell (Wed Jan 21 2004 - 08:51:37 PST)
- Re: AMBER: crystal lattice determination David A. Case (Thu Jan 22 2004 - 17:20:42 PST)
AMBER: oxs g5 machine file Knut Langsetmo (Wed Jan 21 2004 - 12:10:33 PST)
AMBER: crosslink a residue with a small molecule Eric Hu (Wed Jan 21 2004 - 13:41:08 PST)
AMBER: prep file for zinc finger Wen Li (Wed Jan 21 2004 - 14:02:54 PST)
AMBER: remove rotational motion Itziar Maestre Asenjo (Wed Jan 21 2004 - 23:39:15 PST)
- Re: AMBER: remove rotational motion David A. Case (Thu Jan 22 2004 - 17:21:03 PST)
AMBER: How does LEaP place Na+ ions? tang kwa (Thu Jan 22 2004 - 02:10:16 PST)
- Re: AMBER: How does LEaP place Na+ ions? Jose Ramon Blas (Thu Jan 22 2004 - 13:38:03 PST)
- Re: AMBER: How does LEaP place Na+ ions? Bill Ross (Thu Jan 22 2004 - 09:17:32 PST)
- Re: AMBER: How does LEaP place Na+ ions? Jiten (Sun Jan 25 2004 - 17:44:36 PST)
AMBER: restrt L Jin (Thu Jan 22 2004 - 03:03:51 PST)
- Re: AMBER: restrt Dr. Yong Duan (Thu Jan 22 2004 - 05:24:40 PST)
  - Re: AMBER: restrt L Jin (Thu Jan 22 2004 - 06:05:03 PST)
    - Re: AMBER: restrt Dr. Yong Duan (Thu Jan 22 2004 - 18:27:05 PST)
- Re: AMBER: restrt Bill Ross (Thu Jan 22 2004 - 09:15:58 PST)
Re: AMBER: How does LEaP place Na+ ions? Bill Ross (Thu Jan 22 2004 - 09:12:07 PST)
AMBER: Segmentation fault (core dumped) error of antechamber program S. Frank Yan (Thu Jan 22 2004 - 11:36:54 PST)
- Re: AMBER: Segmentation fault (core dumped) error of antechamber program David A. Case (Thu Jan 22 2004 - 17:21:40 PST)
AMBER: oxygen positions around a DNA Ioana Cozmuta (Thu Jan 22 2004 - 18:19:51 PST)
AMBER: Problem using GLYCAM with sander Itziar Maestre Asenjo (Fri Jan 23 2004 - 09:05:52 PST)
- Re: AMBER: Problem using GLYCAM with sander David A. Case (Fri Jan 23 2004 - 13:41:22 PST)
- Re: AMBER: Problem using GLYCAM with sander Bimo Ario Tejo (Sat Jan 24 2004 - 07:28:15 PST)
AMBER: Which program to use to visualize the RESP Outputs derived by AMBER 7 Ilyas Yildirim (Fri Jan 23 2004 - 10:18:23 PST)
- Re: AMBER: Which program to use to visualize the RESP Outputs derived by AMBER 7 Joey Harriman (Fri Jan 23 2004 - 10:43:43 PST)
- Re: AMBER: Which program to use to visualize the RESP Outputs derived by AMBER 7 FyD (Fri Jan 23 2004 - 11:52:28 PST)
Re: AMBER: Which program to use to visualize the RESP Outputs derived by AMBER 7 Bill Ross (Fri Jan 23 2004 - 11:26:15 PST)
AMBER: phosphothreonine Youyi Peng (Fri Jan 23 2004 - 14:57:06 PST)
AMBER: Fwd: NVE & polarizable force field] Martina Roeselova (Fri Jan 23 2004 - 18:16:32 PST)
- Re: AMBER: Fwd: NVE & polarizable force field] Byungchan Kim (Fri Jan 23 2004 - 18:58:04 PST)
- Re: AMBER: Fwd: NVE & polarizable force field] darden (Sat Jan 24 2004 - 13:14:55 PST)
  - Re: AMBER: Fwd: NVE & polarizable force field] David A. Case (Sat Jan 24 2004 - 17:18:45 PST)
AMBER: Memory for AMBER 6 simulation Sergey (Sat Jan 24 2004 - 01:22:56 PST)
- Re: AMBER: Memory for AMBER 6 simulation Bimo Ario Tejo (Mon Jan 26 2004 - 02:39:25 PST)
AMBER: NTR force constant for restraint !! Jiten (Sat Jan 24 2004 - 23:37:09 PST)
AMBER: Cartitian Restraint Error Jiten (Sun Jan 25 2004 - 06:17:11 PST)
- Re: AMBER: Cartitian Restraint Error Jiten (Sun Jan 25 2004 - 06:26:31 PST)
Re: AMBER: Cartitian Restraint Error Bill Ross (Sun Jan 25 2004 - 11:39:58 PST)
- Re: AMBER: Cartitian Restraint Error Jiten (Sun Jan 25 2004 - 17:36:24 PST)
Re: AMBER: how to correctly change frcmod? David A. Case (Sun Jan 25 2004 - 17:17:47 PST)
AMBER: mopac.sh Beale, John (Mon Jan 26 2004 - 06:31:46 PST)
- Re: AMBER: mopac.sh Joey Harriman (Mon Jan 26 2004 - 06:46:31 PST)
AMBER: B factors from simulation and from cryst Vlad Cojocaru (Mon Jan 26 2004 - 08:21:50 PST)
- Re: AMBER: B factors from simulation and from cryst Joseph Nachman (Mon Jan 26 2004 - 13:23:49 PST)
AMBER: B factors --- one more explanation Vlad Cojocaru (Mon Jan 26 2004 - 08:25:47 PST)
Re: AMBER: ambpdb in AMBER7 Bill Ross (Mon Jan 26 2004 - 14:40:12 PST)
- RE: AMBER: ambpdb in AMBER7 Yong Duan (Mon Jan 26 2004 - 15:34:41 PST)
AMBER: Lattice structures in xleap Brandon Tefft (Mon Jan 26 2004 - 21:11:46 PST)
Re: AMBER: Lattice structures in xleap Bill Ross (Mon Jan 26 2004 - 23:52:38 PST)
- AMBER: trajectory file corruption John (Tue Jan 27 2004 - 03:11:54 PST)
  - Re: AMBER: trajectory file corruption Peter Oelschlaeger (Tue Jan 27 2004 - 10:27:44 PST)
  - Re: AMBER: trajectory file corruption James W. Caldwell (Tue Jan 27 2004 - 10:30:20 PST)
  - Re: AMBER: trajectory file corruption Bill Ross (Tue Jan 27 2004 - 10:54:30 PST)
    - AMBER: dielectric constant John (Wed Jan 28 2004 - 06:20:16 PST)
    - Re: AMBER: dielectric constant Martin Lepsik (Wed Jan 28 2004 - 07:42:05 PST)
Re: AMBER: Which program to use to visualize the RESP Outputs FyD (Tue Jan 27 2004 - 08:59:51 PST)
- Re: AMBER: Which program to use to visualize the RESP Outputs Ilyas Yildirim (Tue Jan 27 2004 - 10:49:01 PST)
Re: AMBER: ambpdb in AMBER7 xhu1.memphis.edu (Tue Jan 27 2004 - 09:48:37 PST)
AMBER: compilation under fedora core 1 Carsten Detering (Tue Jan 27 2004 - 10:51:26 PST)
- Re: AMBER: compilation under fedora core 1 James W. Caldwell (Tue Jan 27 2004 - 10:40:48 PST)
- AMBER: Error message in antechamber Ilyas Yildirim (Tue Jan 27 2004 - 10:44:26 PST)
AMBER: A few questions in the protein unfolding simulations using GB model Jiayun Pang (Tue Jan 27 2004 - 12:33:15 PST)
- Re: AMBER: A few questions in the protein unfolding simulations using GB model Bill Ross (Wed Jan 28 2004 - 10:21:10 PST)
  - Re: AMBER: A few questions in the protein unfolding simulations using GB model Carlos Simmerling (Wed Jan 28 2004 - 10:26:31 PST)
    - Re: AMBER: A few questions in the protein unfolding simulations using GB model Jiayun Pang (Thu Jan 29 2004 - 02:47:52 PST)
    - Re: AMBER: A few questions in the protein unfolding simulations using GB model Andy Purkiss (Thu Jan 29 2004 - 06:19:22 PST)
    - Re: AMBER: A few questions in the protein unfolding simulations using GB model David A. Case (Thu Jan 29 2004 - 19:59:24 PST)
- RE: AMBER: A few questions in the protein unfolding simulations using GB model Bill Ross (Wed Jan 28 2004 - 10:22:55 PST)
Re: AMBER: A few questions in the protein unfolding simulations using GB model Bill Ross (Tue Jan 27 2004 - 13:19:10 PST)
- Re: AMBER: A few questions in the protein unfolding simulations using GB model Jiayun Pang (Wed Jan 28 2004 - 04:20:48 PST)
  - RE: AMBER: A few questions in the protein unfolding simulations using GB model florent.barbault (Wed Jan 28 2004 - 04:38:13 PST)
AMBER: SANDER - Abnormal high velocities Miguel de Federico (Wed Jan 28 2004 - 03:16:45 PST)
- Re: AMBER: SANDER - Abnormal high velocities David A. Case (Wed Jan 28 2004 - 08:31:18 PST)
  - Re: AMBER: SANDER - Abnormal high velocities Carlos Simmerling (Wed Jan 28 2004 - 08:36:45 PST)
AMBER: Normal modes of protein-ligand Martin Lepsik (Wed Jan 28 2004 - 05:43:12 PST)
- Re: AMBER: Normal modes of protein-ligand bishop (Wed Jan 28 2004 - 06:44:20 PST)
  - Re: AMBER: Normal modes of protein-ligand Holger Gohlke (Wed Jan 28 2004 - 11:38:57 PST)
- Re: AMBER: Normal modes of protein-ligand Holger Gohlke (Wed Jan 28 2004 - 11:32:49 PST)
  - Re: AMBER: Normal modes of protein-ligand Martin Lepsik (Thu Jan 29 2004 - 01:47:22 PST)
AMBER: LES question Lishan Yao (Wed Jan 28 2004 - 10:52:58 PST)
- Re: AMBER: LES question Carlos Simmerling (Wed Jan 28 2004 - 11:03:04 PST)
- Re: AMBER: LES question Lishan Yao (Thu Jan 29 2004 - 06:46:22 PST)
  - Re: AMBER: LES question Carlos Simmerling (Thu Jan 29 2004 - 08:36:04 PST)
Re: AMBER: Ibelly and Ewald error message when ewald should be off Scott Brozell (Wed Jan 28 2004 - 21:57:06 PST)
AMBER: sander and mpich Thomas Exner (Thu Jan 29 2004 - 00:26:55 PST)
AMBER: CYS, CYX and CYM Nikolai Smolin (Thu Jan 29 2004 - 01:56:09 PST)
AMBER: conversion of amber trajectories to gromos /(xtc) Karin Schleinkofer (Thu Jan 29 2004 - 05:10:28 PST)
- Re: AMBER: conversion of amber trajectories to gromos /(xtc) Luis Gracia (Thu Jan 29 2004 - 12:27:48 PST)
- Re: AMBER: conversion of amber trajectories to gromos /(xtc) Bill Ross (Thu Jan 29 2004 - 12:43:45 PST)
AMBER: XLEAP L Jin (Thu Jan 29 2004 - 06:40:28 PST)
- Re: AMBER: XLEAP Martin Lepsik (Thu Jan 29 2004 - 07:43:18 PST)
- Re: AMBER: XLEAP A.B.S.M Osman gani (Thu Jan 29 2004 - 07:19:04 PST)
AMBER: Moil View on Linux Vlad Cojocaru (Thu Jan 29 2004 - 09:13:57 PST)
- Re: AMBER: Moil View on Linux Carlos Simmerling (Thu Jan 29 2004 - 09:21:20 PST)
AMBER: LES Simulations Vlad Cojocaru (Thu Jan 29 2004 - 09:18:14 PST)
- Re: AMBER: LES Simulations Carlos Simmerling (Thu Jan 29 2004 - 09:20:45 PST)
AMBER: question about LES simulation Vlad Cojocaru (Thu Jan 29 2004 - 08:43:25 PST)
AMBER: LES error Vlad Cojocaru (Thu Jan 29 2004 - 12:49:49 PST)
- Re: AMBER: LES error Carlos Simmerling (Thu Jan 29 2004 - 12:51:28 PST)
AMBER: (No subject) opitz.che.udel.edu (Thu Jan 29 2004 - 14:09:47 PST)
- Re: AMBER: (No subject) David A. Case (Thu Jan 29 2004 - 20:20:43 PST)
  - Re: AMBER: (No subject) Junmei Wang (Fri Jan 30 2004 - 07:02:50 PST)
- Re: AMBER: (No subject) opitz.che.udel.edu (Fri Jan 30 2004 - 08:21:30 PST)
  - Re: AMBER: (No subject) Vlad Cojocaru (Fri Jan 30 2004 - 08:31:10 PST)
- Re: AMBER: (No subject) opitz.che.udel.edu (Fri Jan 30 2004 - 13:32:01 PST)
  - Re: AMBER: (No subject) Junmei Wang (Fri Jan 30 2004 - 13:37:46 PST)
AMBER: test Vlad Cojocaru (Fri Jan 30 2004 - 05:39:14 PST)
Re: AMBER: sander and mpich (which compilers/mpich work) Jerry Grooms (Fri Jan 30 2004 - 15:00:22 PST)
- Re: AMBER: sander and mpich (which compilers/mpich work) Carlos Simmerling (Fri Jan 30 2004 - 15:09:09 PST)
- Re: AMBER: sander and mpich (which compilers/mpich work) Viktor Hornak (Fri Jan 30 2004 - 17:23:21 PST)
  - AMBER: Nose Hoover chain thermostat Byungchan Kim (Fri Jan 30 2004 - 17:35:08 PST)
  - Re: AMBER: sander and mpich (which compilers/mpich work) Jerry Grooms (Sat Jan 31 2004 - 12:44:30 PST)
  - Re: AMBER: sander and mpich (which compilers/mpich work) Jerry Grooms (Sat Jan 31 2004 - 15:08:57 PST)
AMBER: sander.LES on IBM SP cluster Vlad Cojocaru (Sat Jan 31 2004 - 02:40:56 PST)
- Re: AMBER: sander.LES on IBM SP cluster Carlos Simmerling (Sat Jan 31 2004 - 06:27:30 PST)
  - Re: AMBER: sander.LES on IBM SP cluster Vlad Cojocaru (Sat Jan 31 2004 - 09:18:56 PST)
    - AMBER: Installing Amber on IBM AIX cluster Vlad Cojocaru (Sat Jan 31 2004 - 10:50:30 PST)
    - Re: AMBER: sander.LES on IBM SP cluster David A. Case (Sat Jan 31 2004 - 11:02:01 PST)
    - AMBER: AMBER on IBM SP cluster Vlad Cojocaru (Sat Jan 31 2004 - 11:07:29 PST)
    - Re: AMBER: sander.LES on IBM SP cluster Carlos Simmerling (Sat Jan 31 2004 - 11:07:50 PST)
    - Re: AMBER: sander.LES on IBM SP cluster Vlad Cojocaru (Sat Jan 31 2004 - 11:20:56 PST)
    - Re: AMBER: sander.LES on IBM SP cluster Carlos Simmerling (Sat Jan 31 2004 - 11:29:23 PST)
AMBER: Unknown Amber Nomeclature Andrew M K Law (Sat Jan 31 2004 - 14:17:47 PST)

Amber Archive Jan 2004 By Thread