Re: AMBER: sander.LES on IBM SP cluster

From: David A. Case <>
Date: Sat, 31 Jan 2004 11:02:01 -0800

On Sat, Jan 31, 2004, Vlad Cojocaru wrote:
> 3.ln -s -f Machines/Machine.ibm_aix MACHINE

I assume that you got this from Carlos Sosa's web page (or the equivalent)?

> 4. make install

There is no point in trying to compile everything; just compile sander.

> But I get the followin error:
> make: 1254-002 Cannot find a rule to create target ../Machines/mpi/t3d.h
> from dependencies.

Do you have the above file (it should be there). What directory were you
in when this error occurred?


David A. Case                     |  e-mail:
Dept. of Molecular Biology, TPC15 |  fax:          +1-858-784-8896
The Scripps Research Institute    |  phone:        +1-858-784-9768
10550 N. Torrey Pines Rd.         |  home page:                   
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Received on Sat Jan 31 2004 - 19:53:01 PST
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