AMBER: Errors in MM-PBSA???

From: ML <>
Date: Wed, 21 Jan 2004 12:46:35 +0100

Dear AMBER community,
as I'm running mm_pbsa calculations I get the following messages
irrespective of whether the calculation completes or fails. Is it some
serious problem or bad compilation? Does it affect the results?

Thanks for your replies.


 Martin Lepsik
Illegal character in prototype for mm_pbsa_statistics::calc_stat :
\%GEN,\%DEC,\%DEL,\%GBO,\%PRO at
/usr/local/programs/amber7-large/src/mm_pbsa/ line 274.

Using an array as a reference is deprecated at /usr/local/programs/amber7-large/src/mm_pbsa/ line 648.
Illegal character in prototype for mm_pbsa_statistics::mm_pbsa_stat : $calc_delta,$calc_dec,$input,$output,$snap_min,$snap_max at /usr/local/programs/amber7-large/src/mm_pbsa/ line 352.
Illegal character in prototype for main::check_sanity : \%GEN,\%DEC,\%DEL,\%GBO,\%MOL,\%NMO,\%MAK,\%PRO,\$TRA at /usr/local/programs/amber7-large/exe/ line 379.
Martin Lepsik
Dept. of Molecular Modeling
Institute of Organic Chemistry & Biochemistry
Czech Academy of Sciences
phone: +420-220 183 540
fax:+420-220 183 292
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Received on Wed Jan 21 2004 - 11:53:01 PST
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