AMBER: rms in ptraj

From: L Jin <>
Date: Mon, 5 Jan 2004 14:49:47 +0000


Please anyone can tell me how does the time interval work in the rms of ptraj.
If I have run an MD with 1ns with ntwx=100 so I have got one mdcrd with 10000
frames.If I want to get the rms of them just correspond to the 10000 frames,
should I set the time interval with 1 or 100? Thanks in advance.


The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Wed Jan 14 2004 - 15:53:14 PST
Custom Search