Re: AMBER: A few questions in the protein unfolding simulations using GB model

From: Bill Ross <>
Date: Tue, 27 Jan 2004 13:19:10 -0800 (PST)

> It took 2.5 days to run a 1 ns simulations to the monomeric structure =
> (164 residues) while it took 12 days to finish a 1 ns run on the dimeric =
> structure. This time difference, I think, is a bit surprising.

What platform were you running on? What else was running during
those times?

Bill Ross

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Received on Wed Jan 28 2004 - 09:53:01 PST
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