Re: AMBER: trajectory file corruption

From: Peter Oelschlaeger <>
Date: Tue, 27 Jan 2004 10:27:44 -0800

Dear John,

I had problems when loading Amber 7 trajectories, too. The solution was
very simple: load parm7 and crdbox file types. In other words, you just
need to load the right format.
I don't know if that will fix your problem, though....



John wrote:

>Hello All,
>I successfully completed a 500ps production MD. The pdb file I created using
>the rst file looks reasonable in VMD. When I tried to use the trajectory
>file VMD could not read the file. After opening it I realised that it has
>been totally corrupted and has nothing to do with a normal molecular
>dynamics trajectory file. Here are some ghastly details of the file: " =.
>Any idea what is the cause of this?
>Many thanks for your help.
>Best wishes,
>The AMBER Mail Reflector
>To post, send mail to
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Peter Oelschlaeger, Ph.D.
Mayo lab, Division of Biology, Caltech
1200 E. California Blvd., mail code 114-96
Pasadena, CA 91125-9600
Phone: 	(626) 395-8085, Lab: (626) 395-6407
Fax:	(626) 440-7231
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Tue Jan 27 2004 - 18:53:01 PST
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