Amber Archive Mar 2008: by date

Saturday, 1 March 2008
- AMBER: regarding:calculation of b factor using ptraj jani sahil
Sunday, 2 March 2008
- Re: AMBER: regarding:calculation of b factor using ptraj gurpreet singh
Monday, 3 March 2008
- AMBER: questions about run MD at different pH Kailee
- AMBER: Writing pressure in md.out file in NVT simulation Sudha Mani Karra
- Re: AMBER: Writing pressure in md.out file in NVT simulation David A. Case
- Re: AMBER: Writing pressure in md.out file in NVT simulation Vlad Cojocaru
- Re: AMBER: Writing pressure in md.out file in NVT simulation Sudha Mani Karra
- AMBER: xleap screen output Francesco Pietra
- Re: AMBER: xleap screen output David A. Case
- Re: AMBER: xleap screen output Francesco Pietra
- Re: AMBER: xleap screen output Bill Ross
- AMBER: ACS COMP Division awards- deadline this week Carlos Simmerling
- Re: AMBER: questions about run MD at different pH David A. Case
- AMBER: Problem running implicit minimization Lili Peng
- Re: AMBER: Problem running implicit minimization David A. Case
- Re: AMBER: Problem running implicit minimization Lili Peng
Tuesday, 4 March 2008
- AMBER: missing gaff parameters Samuele Giani
- Re: AMBER: Problem running implicit minimization Carlos Simmerling
- Re: AMBER: questions about run MD at different pH Kailee
- Re: AMBER: missing gaff parameters Junmei Wang
- RE: AMBER: missing gaff parameters Ross Walker
- Re: AMBER: missing gaff parameters Samuele Giani
- Re: AMBER: xleap screen output Francesco Pietra
- Fwd: Re: AMBER: xleap screen output Francesco Pietra
- Fwd: Re: AMBER: xleap screen output SOLVED Francesco Pietra
- Re: AMBER: Problem running implicit minimization Lili Peng
- Re: Fwd: Re: AMBER: xleap screen output Bill Ross
- Re: AMBER: Problem running implicit minimization Carlos Simmerling
- Re: AMBER: Problem running implicit minimization Thomas Cheatham
- RE: AMBER: Amber 8 Equivalent of the Amber 5 - Edit program Mohd Farid Ismail
- Re: AMBER: Problem running implicit minimization Lili Peng
- Re: AMBER: questions about run MD at different pH David A. Case
Wednesday, 5 March 2008
- AMBER: a question about parameter b in the hyperbolic form of penalty function for RESP fit Ye Mei
- AMBER: Atom types/parameters for chromene anna.schrey.gmx.de
- Re: AMBER: Atom types/parameters for chromene Junmei Wang
- Re: AMBER: Atom types/parameters for chromene Francesco Pietra
- Re: AMBER: Atom types/parameters for chromene David A. Case
- AMBER: setBox command Vijay Manickam Achari
Thursday, 6 March 2008
- AMBER: not equivalent oxygens in COO- / how to force order of atoms in IMPROPER? Edyta Malolepsza
- Re: AMBER: Atom types/parameters for chromene anna.schrey.gmx.de
- Re: AMBER: setBox command Thomas Steinbrecher
- AMBER: Steve Seibold
- Re: AMBER: Thomas Steinbrecher
- RE: AMBER: Steve Seibold
- RE: AMBER: Ross Walker
- Re: AMBER: Jianyin Shao
- AMBER: XMGRACE on Linux 64 Bit dpandit.brandeis.edu
- Re: AMBER: XMGRACE on Linux 64 Bit Bill Ross
- Re: AMBER: XMGRACE on Linux 64 Bit dpandit.brandeis.edu
- RE: AMBER: XMGRACE on Linux 64 Bit Ross Walker
Friday, 7 March 2008
- AMBER: Microcannonical MD Reference priya priya
- AMBER: NVE energy and temperature drift Lars Skjærven
- Re: AMBER: NVE energy and temperature drift David A. Case
- AMBER: Fwd: positive potential energy and large 1-4 EEL Mey Khalili
- AMBER: Inquiry on nmode for alculate frequencies & thermodynamics analysis James Thomas
- Re: AMBER: NVE energy and temperature drift Lars Skjærven
- RE: AMBER: XMGRACE on Linux 64 Bit dpandit.brandeis.edu
- Re: AMBER: XMGRACE on Linux 64 Bit David LeBard
- Re: AMBER: Inquiry on nmode for alculate frequencies & thermodynamics analysis David A. Case
- AMBER: RE: Request Ross Walker
- Re: AMBER: Microcannonical MD Reference David A. Case
- AMBER: reg molecular dynamics Uma R
Saturday, 8 March 2008
- AMBER: Negative ligand (Peroxide) Syed Tarique Moin
- AMBER: Compiler issues with Altix450 finke.oakland.edu
- AMBER: Clarification on error message Campbell, Patrick
- Re: AMBER: Clarification on error message Thomas Steinbrecher
- RE: AMBER: Clarification on error message Campbell, Patrick
- Re: AMBER: Compiler issues with Altix450 Atro Tossavainen
- AMBER: mmpbsa INSTRNG error? Sergio Wong
Sunday, 9 March 2008
- Re: AMBER: mmpbsa INSTRNG error? Gohlke.bioinformatik.uni-frankfurt.de
- AMBER: Timing analysis on Ranger David LeBard
- AMBER: Antechamber, net molecular charge gurpreet singh
- AMBER: Benchmarks on Fujitsu PrimePower 2500? Craig Gough
- Fwd: AMBER: Negative ligand (Peroxide) Syed Tarique Moin
Monday, 10 March 2008
- Re: AMBER: Benchmarks on Fujitsu PrimePower 2500? Atro Tossavainen
- Re: AMBER: Benchmarks on Fujitsu PrimePower 2500? Robert Duke
- Re: AMBER: Benchmarks on Fujitsu PrimePower 2500? Atro Tossavainen
- AMBER: writing out a distance between two atoms in sander Vlad Cojocaru
- Re: AMBER: Antechamber, net molecular charge Junmei Wang
- Re: AMBER: writing out a distance between two atoms in sander Thomas Steinbrecher
- Re: AMBER: writing out a distance between two atoms in sander Vlad Cojocaru
- Re: AMBER: Compiler issues with Altix450 finke.oakland.edu
- AMBER: problem with antech amber Madjid Taghdir
- AMBER: output effective Born radii Holly Freedman
- Re: AMBER: Compiler issues with Altix450 Atro Tossavainen
- Re: AMBER: Compiler issues with Altix450 David A. Case
- AMBER: Re: Amber: parameters for Silicon Scott Brozell
- Re: AMBER: output effective Born radii David A. Case
- Re: AMBER: Fwd: positive potential energy and large 1-4 EEL David A. Case
- Re: AMBER: AMBER install problem David A. Case
- AMBER: SMD using amber ChengZhong Zhang
- Re: AMBER: output effective Born radii Holly Freedman
- Re: AMBER: AMBER install problem Atro Tossavainen
Tuesday, 11 March 2008
- AMBER: convert AMBER format input files into DL_POLY format input files? Kefa Lu
- AMBER: solvate with methanol san_amber roy
- Re: AMBER: solvate with methanol Rita Cassia
- AMBER: Adding New Parameters and Modifying Existing Parameters serhanyigen.mail.ege.edu.tr
- AMBER: SPARC benchmarks (was re Fujitsu PRIMEPOWER) Atro Tossavainen
- Re: AMBER: Adding New Parameters and Modifying Existing Parameters Thomas Steinbrecher
- AMBER: question on antechamber: jaguar ouput wei zhang
- Re: AMBER: question on antechamber: jaguar ouput Junmei Wang
- Re: AMBER: question on antechamber: jaguar ouput Marcelo Puiatti
- Re: AMBER: AMBER install problem David A. Case
- AMBER: Error during compilation of Amber8, /bin/sh: ./Makelist: not found, make[1]: *** [libobj] Error 127 David Rangel
- Re: AMBER: Error during compilation of Amber8, /bin/sh: ./Makelist: not found, make[1]: *** [libobj] Error 127 David A. Case
Wednesday, 12 March 2008
- AMBER: lastrst problem san_amber roy
- Fwd: AMBER: lastrst problem san_amber roy
- AMBER: ptraj and non-bonded contacts Samuel Genheden (a03samge)
- Re: AMBER: Error during compilation of Amber8, /bin/sh: ./Makelist: not found, make[1]: *** [libobj] Error 127 David Rangel
- Re: AMBER: question on antechamber: jaguar ouput wei zhang
- AMBER: study of protein stability in different ion using AMBER Prem Prakash Pathak
Thursday, 13 March 2008
- AMBER: distance restraint gurpreet singh
- AMBER: [success] problem compiling Amber9 on Bull Linux Yannick Monclin
- AMBER: Energy calculation and replica exchange in Amber9 Li Dawei
- AMBER: can't make antechamber work for regular nucleotides Mey Khalili
- AMBER: ptraj, hbond and non-bonded contacts Samuel Genheden (a03samge)
- AMBER: Temperature Range For REMD tushar garud
- Re: AMBER: Temperature Range For REMD Carlos Simmerling
- AMBER: implicit energy calculations rebeca.mmb.pcb.ub.es
- AMBER: RE: Re: AMBER: AMBER install problem Kijeong Kwac
- Re: AMBER: implicit energy calculations Thomas Cheatham III
- Re: AMBER: ptraj, hbond and non-bonded contacts Thomas Cheatham III
- Re: AMBER: distance restraint David A. Case
- AMBER: force field oguz gurbulak
- AMBER: protonated histidine ( charges in parm file versus all_amino03.lib ) Lwin, ThuZar
- AMBER: How to calculate deformability by PTRAJ ? sychen
Friday, 14 March 2008
- Re: AMBER: ptraj, hbond and non-bonded contacts Jojart Balazs
- AMBER: Torsion potential in GAFF / "statistic value of parm94" Alexander Metz
- AMBER: protonated histidine ( charges in parm file versus all_amino03.lib ). Lwin, ThuZar
- RE: AMBER: protonated histidine ( charges in parm file versus all_amino03.lib ). Ross Walker
- AMBER: Heating POL3 Box Troubles Paul Johns
- Re: AMBER: Heating POL3 Box Troubles Thomas Steinbrecher
- Re: AMBER: Heating POL3 Box Troubles Paul Johns
- Re: AMBER: Heating POL3 Box Troubles Thomas Steinbrecher
- Re: AMBER: Heating POL3 Box Troubles Paul Johns
- Re: AMBER: Heating POL3 Box Troubles Thomas Steinbrecher
- Re: AMBER: can't make antechamber work for regular nucleotides Junmei Wang
- Re: AMBER: Torsion potential in GAFF / "statistic value of parm94" Junmei Wang
- Re: AMBER: Heating POL3 Box Troubles David A. Case
- Re: AMBER: Heating POL3 Box Troubles David A. Case
- Re: AMBER: problem with antech amber David A. Case
- Re: AMBER: study of protein stability in different ion using AMBER David A. Case
Saturday, 15 March 2008
- AMBER: Negative ligand Syed Tarique Moin
Monday, 17 March 2008
- SV: AMBER: ptraj, hbond and non-bonded contacts Samuel Genheden (a03samge)
- Re: SV: AMBER: ptraj, hbond and non-bonded contacts Vlad Cojocaru
- SV: AMBER: ptraj, hbond and non-bonded contacts Samuel Genheden (a03samge)
- SV: SV: AMBER: ptraj, hbond and non-bonded contacts Samuel Genheden (a03samge)
- Re: AMBER: can't make antechamber work for regular nucleotides Mey Khalili
- Re: SV: AMBER: ptraj, hbond and non-bonded contacts Thomas Cheatham III
- AMBER: mm_pbsa positive ELE Qi Yan
- Re: AMBER: mm_pbsa positive ELE Ray Luo
Friday, 14 March 2008
- AMBER: compiling AMBER9 with bintraj option on AMD64 Vlad Cojocaru
Monday, 17 March 2008
- RE: AMBER: mm_pbsa positive ELE Qi Yan
- Re: AMBER: Heating POL3 Box Troubles Paul Johns
- Re: AMBER: mm_pbsa positive ELE Ray Luo
- SV: SV: AMBER: ptraj, hbond and non-bonded contacts Samuel Genheden (a03samge)
- Re: AMBER: compiling AMBER9 with bintraj option on AMD64 David A. Case
- AMBER: What's making my system lose total energy? David Cerutti
- RE: AMBER: What's making my system lose total energy? Ross Walker
- Re: AMBER: What's making my system lose total energy? Thomas Cheatham
- Re: AMBER: What's making my system lose total energy? David Cerutti
- Re: AMBER: Heating POL3 Box Troubles David A. Case
Tuesday, 18 March 2008
- AMBER: a minor bug in RESP Ye Mei
- Re: AMBER: compiling AMBER9 with bintraj option on AMD64 Vlad Cojocaru
- AMBER: problem with distance restrain aneesh cna
- AMBER: replica exchange : problem with sander Guillaume Renvez
- Re: AMBER: replica exchange : problem with sander Carlos Simmerling
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- Re: Fwd: AMBER: lastrst problem David A. Case
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- AMBER: Problems with neglected restaints anna.schrey.gmx.de
- RE: AMBER: protonated histidine ( charges in parm file versus all_a mino03.lib ). . . Lwin, ThuZar
- Re: AMBER: replica exchange : problem with sander Carlos Simmerling
- Re: AMBER: Problems with neglected restaints Carlos Simmerling
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- Re: AMBER: replica exchange : problem with sander Carlos Simmerling
- Re: AMBER: Problems with neglected restaints David A. Case
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- Re: AMBER: What's making my system lose total energy? David Cerutti
- Re: AMBER: problem with distance restrain David A. Case
- Re: AMBER: can't make antechamber work for regular nucleotides Junmei Wang
Wednesday, 19 March 2008
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- Re: AMBER: replica exchange : problem with sander Carlos Simmerling
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- Re: AMBER: replica exchange : problem with sander Carlos Simmerling
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- Re: AMBER: replica exchange : problem with sander Carlos Simmerling
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- Re: AMBER: not equivalent oxygens in COO- / how to force order of atoms in IMPROPER? David A. Case
- Re: Fwd: AMBER: lastrst problem san_amber roy
- AMBER: Inquiry on analyzing the amplitude from nmdout results James Thomas
- Re: AMBER: not equivalent oxygens in COO- / how to force order of atoms in IMPROPER? Edyta Malolepsza
- AMBER: Amber9 Installation Problem trudy.uoguelph.ca
- Re: AMBER: not equivalent oxygens in COO- / how to force order of atoms in IMPROPER? Francesco Pietra
- AMBER: MNDO parameters for Mg+2 E.M.
- RE: AMBER: MNDO parameters for Mg+2 Ross Walker
- Re: AMBER: Heating POL3 Box Troubles Paul Johns
- AMBER: standard residues Holly Freedman
- Re: AMBER: Amber9 Installation Problem Cenk Andac
- Re: AMBER: Amber9 Installation Problem Cenk Andac
- Re: AMBER: Amber9 Installation Problem Cenk Andac
- Re: AMBER: Inquiry on analyzing the amplitude from nmdout results David A. Case
- Re: AMBER: Heating POL3 Box Troubles David A. Case
- Re: AMBER: Inquiry on analyzing the amplitude from nmdout results James Thomas
- Re: AMBER: Inquiry on analyzing the amplitude from nmdout results David A. Case
- Re: AMBER: not equivalent oxygens in COO- / how to force order of atoms in IMPROPER? David A. Case
- Re: AMBER: Amber9 Installation Problem David A. Case
- Re: AMBER: What's making my system lose total energy? David A. Case
- AMBER: Water Topology Ivelin Georgiev
- RE: AMBER: Water Topology Ross Walker
- AMBER: potential of mean force: Unit of PMF energies and min path Catein Catherine
Thursday, 20 March 2008
- AMBER: Happy holi Bertrand P. S. Russell
- AMBER: problem with distance restraints aneesh cna
- Re: AMBER: Water Topology Ivelin Georgiev
- Re: AMBER: replica exchange : problem with sander Carlos Simmerling
- Re: AMBER: replica exchange : problem with sander Guillaume Renvez
- RE: AMBER: Water Topology Ross Walker
- AMBER: INPCRD error on open Campbell, Patrick
- Re: AMBER: INPCRD error on open Carlos Simmerling
- Re: AMBER: INPCRD error on open Cyril Bauvais
- RE: AMBER: INPCRD error on open Campbell, Patrick
- Re: AMBER: INPCRD error on open Carlos Simmerling
- RE: AMBER: INPCRD error on open Campbell, Patrick
- RE: AMBER: INPCRD error on open Campbell, Patrick
- Re: AMBER: Problems with neglected restaints anna.schrey.gmx.de
- Re: AMBER: Amber9 Installation Problem trudy.uoguelph.ca
- Re: AMBER: Amber9 Installation Problem trudy.uoguelph.ca
- Re: AMBER: Amber9 Installation Problem David A. Case
- AMBER: Charge scheme for simulating protonated adenine prateeksha s
Friday, 21 March 2008
- Re: AMBER: Charge scheme for simulating protonated adenine FyD
- Re: AMBER: Charge scheme for simulating protonated adenine rpaduri.chem.wayne.edu
- Re: AMBER: Charge scheme for simulating protonated adenine prateeksha s
- Re: AMBER: Charge scheme for simulating protonated adenine prateeksha s
- Re: AMBER: problem with distance restraints David A. Case
- AMBER: equilibration of peptide tushar garud
Saturday, 22 March 2008
- AMBER: cntrl namelist error Campbell, Patrick
- RE: AMBER: cntrl namelist error Ross Walker
- Re: AMBER: cntrl namelist error David A. Case
- RE: AMBER: cntrl namelist error Campbell, Patrick
- RE: AMBER: cntrl namelist error Campbell, Patrick
- Re: AMBER: standard residues David A. Case
- Re: AMBER: equilibration of peptide David A. Case
- Re: AMBER: standard residues Holly Freedman
Monday, 24 March 2008
- AMBER: RE: Force Field Parameterizing Shultz, Jack
- AMBER: hybrid remd imaging Geoff Wood
- Re: AMBER: hybrid remd imaging Carlos Simmerling
- Re: AMBER: hybrid remd imaging Geoff Wood
- Re: AMBER: hybrid remd imaging Geoff Wood
- AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Qi Yan
- Re: AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Da-Wei Li
- RE: AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Qi Yan
Tuesday, 25 March 2008
- AMBER: Nmode segmentation fault James Thomas
- AMBER: addions and addions2 dpandit.brandeis.edu
- Re: AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Andrew Borgert
- Re: AMBER: RE: Force Field Parameterizing David A. Case
- AMBER: help regarding warning message snoze pa
- AMBER: anion and cation simulaton gurpreet singh
- Re: AMBER: Nmode segmentation fault David A. Case
- RE: AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Qi Yan
- Re: AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Da-Wei Li
- Re: AMBER: Nmode segmentation fault James Thomas
- Re: AMBER: addions and addions2 Bill Ross
- AMBER: Convert dcd to mdcrd Seth Lilavivat
- Re: AMBER: Nmode segmentation fault David A. Case
- Re: AMBER: help regarding warning message David A. Case
- Re: AMBER: Nmode segmentation fault James Thomas
- AMBER: RE: Force Field Parameterizing FyD
- Re: AMBER: anion and cation simulaton FyD
- Re: AMBER: help regarding warning message snoze pa
- AMBER: umbrella sampling for proton transfer cniu.ualberta.ca
- Re: AMBER: umbrella sampling for proton transfer Thomas Steinbrecher
- AMBER: NTR Restraints Daniel Smith
Wednesday, 26 March 2008
- Re: AMBER: Convert dcd to mdcrd Vlad Cojocaru
- AMBER: FAD and NAD parameters Thomas Leonard
- Re: AMBER: FAD and NAD parameters FyD
- RE: AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Qi Yan
- Re: AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Steven Winfield
- AMBER: OPLS force field aneesh cna
- Re: AMBER: OPLS force field David A. Case
- AMBER: mm-pbsa multiple trajectory approach? Seth Lilavivat
- AMBER: residual dipolar couplings - alignment tensor energy Douglas Kojetin
- AMBER: RMSD of two different molecules JunJun Liu
- Re: AMBER: RMSD of two different molecules Da-Wei Li
- AMBER: how to link two different atoms in xLeap snoze pa
- Re: AMBER: RMSD of two different molecules JunJun Liu
- Re: AMBER: mm-pbsa multiple trajectory approach? Chris Moth
- RE: AMBER: WARNING in readAmberTrajectory(): Set #7918 is corrupted (-) Chris Moth
- AMBER: Error with a binary restart file Kijeong Kwac
- Re: AMBER: Error with a binary restart file David A. Case
- AMBER: PF6 parameters aneesh cna
- Re: AMBER: how to link two different atoms in xLeap David A. Case
Thursday, 27 March 2008
- AMBER: Error- MM_PBSA calculation vikky 99
- AMBER: FW: MD run time inquiry Campbell, Patrick
- Re: AMBER: FW: MD run time inquiry Carlos Simmerling
- FW: AMBER: FW: MD run time inquiry Campbell, Patrick
- Re: AMBER: hybrid remd imaging Geoff Wood
- Re: FW: AMBER: FW: MD run time inquiry Carlos Simmerling
- FW: FW: AMBER: FW: MD run time inquiry Campbell, Patrick
- Re: AMBER: NTR Restraints David A. Case
- AMBER: Protein rotating out of box Lars Skjærven
- AMBER: Questions toward Azobenzene Chih-Ying Lin
- RE: AMBER: PF6 parameters caoch
Friday, 28 March 2008
- AMBER: measuring contacts: error "glibc detected" rebeca.mmb.pcb.ub.es
- AMBER: GAFF Eric Germaneau
- AMBER: REMD simulation error Guillaume Renvez
- Re: AMBER: mm-pbsa multiple trajectory approach? Seth Lilavivat
- AMBER: problem with nmod yuri pomè
- AMBER: AMBER 9 testing Taufik Al-Sarraj
- Re: AMBER: AMBER 9 testing David A. Case
- Re: AMBER: problem with nmod David A. Case
- Re: AMBER: AMBER 9 testing Taufik Al-Sarraj
- AMBER: Amber Workshop Chih-Ying Lin
Saturday, 29 March 2008
- AMBER: meet problem in adding ions and waterbox Qiang Li
Sunday, 30 March 2008
- AMBER: Regarding SHAKE gurpreet singh
- Re: AMBER: AMBER 9 testing David A. Case
- Re: AMBER: meet problem in adding ions and waterbox Emilio Xavier Esposito
- AMBER: reproducing http://amber.scripps.edu/tutorials/advanced/tutorial6/index.htm with explicit water Markus Kaukonen
Monday, 31 March 2008
- AMBER: Free energy landscape? HOWTO? Yi-Ming Cheng
- AMBER: TI: perturbation method fatima.chami.durham.ac.uk
- AMBER: Select specific residues (leap) Marta Rossini
- AMBER: energy problems in simulation with restraints Daniel Cappel
- Re: AMBER: Select specific residues (leap) FyD
- RE: AMBER: Select specific residues (leap) Marta Rossini
- AMBER: installation amber9 Geoff Wood
- RE: AMBER: Select specific residues (leap) FyD
- RE: AMBER: Select specific residues (leap) Marta Rossini
- Re: AMBER: not equivalent oxygens in COO- / how to force order of atoms in IMPROPER? Edyta Malolepsza
- Re: AMBER: energy problems in simulation with restraints David A. Case
- Re: AMBER: TI: perturbation method Thomas Steinbrecher
- AMBER: multiple dihedral restraints using group mkseo
- Re: AMBER: installation amber9 David A. Case
- RE: AMBER: Select specific residues (leap) FyD
- AMBER: memory limitation of Amber 9 yavuzturkm.prc.boun.edu.tr
- AMBER: nmode James Thomas
- Re: AMBER: nmode David A. Case
- AMBER: running minimisation on cis-azobenzene Chih-Ying Lin
- Re: AMBER: running minimisation on cis-azobenzene Thomas Steinbrecher
- AMBER: Amber Workshop Chih-Ying Lin
- Re: AMBER: memory limitation of Amber 9 David A. Case

Last message date: Fri Apr 18 2008 - 21:15:44 PDT
Archived on: Fri Nov 22 2024 - 05:53:38 PST

Amber Archive Mar 2008 by date