> I am presently trying to install AMBER 9 on an SGI Altix 450 cluster but am having difficulty. Do you have a good recommedation for a compiler which works well with this system.
The Intel compilers, obviously. It would be extremely strange if you
had an Altix system with no access to the Intel compilers.
> It appears from the installation instructions that a g95 compiler is
> recommended.
Huh... which instructions are you reading?
You should try this first:
./configure nopar sgi_altix
This sets you up for a serial version on the Altix, then when you're
OK that it works,
./configure mpi sgi_altix
sets up the parallel version.
> I have also tried an ifort compiler which works for the smaller programs but not sander (an error appears regarding a program "icc" which I am not familiar with and was not installed with our cluster).
icc is the Intel C compiler. If it isn't installed, your Altix
installation is seriously FUBAR.
--
Atro Tossavainen (Mr.) / The Institute of Biotechnology at
Systems Analyst, Techno-Amish & / the University of Helsinki, Finland,
+358-9-19158939 UNIX Dinosaur / employs me, but my opinions are my own.
< URL : http : / / www . helsinki . fi / %7E atossava / > NO FILE ATTACHMENTS
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Received on Sun Mar 09 2008 - 06:07:57 PDT
