AMBER: RMSD of two different molecules

From: JunJun Liu <>
Date: Wed, 26 Mar 2008 16:35:32 -0400

Hello everyone,

I have two small molecules with different atom numbers. Is there a way to
know the RMSD value between these two different molecules? Can ptraj do

Thanks in advance!

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Received on Fri Apr 18 2008 - 21:14:15 PDT
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