Dear Users,
I am using amber heme parameter but getting some warning. Do you think i
should take these warning seriously?
thanks for your help.
s
> loadAmberParams /usr/local/amber9/benchmarks/hb/frcmod.hemall
Loading parameters: /usr/local/amber9/benchmarks/hb/frcmod.hemall
Reading force field modification type file (frcmod)
Reading title:
No mass defined for non-bond atom type: LO - skipping
No mass defined for non-bond atom type: LC - skipping
> loadAmberPrep /usr/local/amber9/benchmarks/hb/heme_all.in
Loading Prep file: /usr/local/amber9/benchmarks/hb/heme_all.in
(UNKNOWN ATOM TYPE: NO)
(UNKNOWN ATOM TYPE: CX)
(UNKNOWN ATOM TYPE: CX)
(UNKNOWN ATOM TYPE: NO)
(no charges read on atoms lines in deoxy Heme residue ALL ATOM, Yves
names, Bayly-modified)
Loaded UNIT: HEM
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Fri Apr 18 2008 - 21:13:56 PDT
