Amber Archive Feb 2001: by subject

(no subject)
- Michal Otyepka (Wed Feb 21 2001 - 12:23:01 PST)
- Yinghong Sheng (Wed Feb 14 2001 - 09:45:43 PST)
- robert (Tue Feb 13 2001 - 16:35:21 PST)
- Lynn Amon (Tue Feb 13 2001 - 11:39:20 PST)
- Christian Pilger (Tue Feb 13 2001 - 11:33:31 PST)
- noor gaffoor (Sun Feb 11 2001 - 21:08:17 PST)
8-Oxo-G
- Eva Darian (Wed Feb 28 2001 - 10:00:18 PST)
a few more questions
- Jake Isaacs (Mon Feb 12 2001 - 10:37:16 PST)
AMBER mail reflector archive
- Anita Ilze Zvaigzne (Thu Feb 15 2001 - 16:31:43 PST)
- Bill Ross (Thu Feb 15 2001 - 15:47:31 PST)
- Jianxin Guo (Thu Feb 15 2001 - 15:13:09 PST)
- Ross Walker (Thu Feb 15 2001 - 15:11:45 PST)
- Jarrod A. Smith (Thu Feb 15 2001 - 14:54:55 PST)
AMBER on SUN
- Bill Ross (Tue Feb 20 2001 - 11:17:50 PST)
- Yong Duan (Tue Feb 20 2001 - 10:29:41 PST)
- Craig Marhefka (Tue Feb 20 2001 - 06:43:33 PST)
AMBER parameter for HCOO(-) and NCHCHNHC
- Yinghong Sheng (Tue Feb 06 2001 - 15:18:00 PST)
Amber Parameters
- Christian Pilger (Wed Feb 14 2001 - 05:05:55 PST)
- Antonio Entrena Guadix (Wed Feb 14 2001 - 03:04:54 PST)
Amber6 by g77 and mpich
- Miyashita, Osamu (Thu Feb 15 2001 - 12:54:10 PST)
Athlon 1GHz (was: Dual Origin vs dual Alfa)
- R. M. Fesinmeyer (Wed Feb 14 2001 - 12:16:51 PST)
- Nathalie Godbout (Wed Feb 14 2001 - 12:00:25 PST)
- R. M. Fesinmeyer (Wed Feb 14 2001 - 11:02:11 PST)
- Tru Huynh (Wed Feb 14 2001 - 09:29:53 PST)
Bang for the Buck
- Margaret Cheung (Sat Feb 10 2001 - 23:20:46 PST)
- R. M. Fesinmeyer (Sat Feb 10 2001 - 03:10:46 PST)
- Carlos Simmerling (Fri Feb 09 2001 - 19:59:16 PST)
- Jarrod Smith (Fri Feb 09 2001 - 18:55:10 PST)
- Jarrod Smith (Fri Feb 09 2001 - 18:13:31 PST)
- David Pearlman (Fri Feb 09 2001 - 17:16:42 PST)
- Bill Ross (Fri Feb 09 2001 - 15:51:42 PST)
- David Pearlman (Fri Feb 09 2001 - 15:19:12 PST)
- David Konerding (Fri Feb 09 2001 - 14:54:13 PST)
- mite51 (Fri Feb 09 2001 - 14:33:44 PST)
- Robert Matthew Fesinmeyer (Fri Feb 09 2001 - 13:50:57 PST)
batch mode
- Jake Isaacs (Mon Feb 12 2001 - 10:18:28 PST)
- Fernanda Camarinha (Mon Feb 12 2001 - 09:29:07 PST)
Belly Atonms
- Mark Markson (Tue Feb 13 2001 - 12:52:53 PST)
belly run
- Bill Ross (Wed Feb 21 2001 - 10:37:03 PST)
Can't run sander_classic with parallel machine
- Miyashita, Osamu (Fri Feb 23 2001 - 09:58:47 PST)
- Khatcharin Siriwong (Fri Feb 23 2001 - 09:31:16 PST)
Compilation of AMBER6
- A.Madhumalar (Thu Feb 15 2001 - 10:36:51 PST)
- jim caldwell (Thu Feb 15 2001 - 10:20:15 PST)
Compilation of Amber6 in linux machine
- David Konerding (Mon Feb 19 2001 - 07:46:55 PST)
- Thomas A. Spraggins (Sun Feb 18 2001 - 11:06:14 PST)
- A.Madhumalar (Sun Feb 18 2001 - 00:08:48 PST)
consult
- ZHANG RB (Sun Feb 25 2001 - 03:50:47 PST)
- ZHANG RB (Sun Feb 25 2001 - 03:50:11 PST)
db4 with amber5.0
- Daniel GENEST (Fri Feb 23 2001 - 09:44:56 PST)
disk file larger than 2 GB
- Mite51_at_hotmail.com (Wed Feb 14 2001 - 23:59:25 PST)
- Yuguang Mu (Wed Feb 14 2001 - 23:12:47 PST)
DMSO ?
- Yuguang Mu (Tue Feb 13 2001 - 08:22:42 PST)
Dual Origin vs dual Alfa
- Nathalie Godbout (Wed Feb 14 2001 - 08:18:23 PST)
- Anton Guliaev (Tue Feb 13 2001 - 16:06:37 PST)
dynamic memory allocation
- Bill Ross (Wed Feb 14 2001 - 10:21:22 PST)
- Christian Pilger (Wed Feb 14 2001 - 08:24:47 PST)
- Chuck Schneider (Wed Feb 14 2001 - 08:20:02 PST)
- Bill Ross (Tue Feb 13 2001 - 11:30:28 PST)
error msg
- Eoin Galligan (Mon Feb 05 2001 - 04:44:59 PST)
- Eoin Galligan (Mon Feb 05 2001 - 04:44:59 PST)
ethidium bromide parms
- Peter Gannett (Thu Feb 15 2001 - 18:20:26 PST)
EWALD BOMB
- Ross Walker (Thu Feb 15 2001 - 15:10:02 PST)
- Mahadevan Seetharaman (Thu Feb 15 2001 - 14:45:44 PST)
Fe4S4 cluster
- Agnes Hahn (Thu Feb 22 2001 - 08:06:09 PST)
Fluorescent dyes
- Troy Bothwell (Wed Feb 28 2001 - 20:01:47 PST)
GB protein simulation
- Guanglei Cui (Mon Feb 19 2001 - 08:58:23 PST)
generating parameters for a small molecule ligand
- Simon Cross (Wed Feb 14 2001 - 04:40:15 PST)
- Jake Isaacs (Tue Feb 13 2001 - 08:48:03 PST)
Gibbs
- Ann Hermone (Mon Feb 12 2001 - 12:17:51 PST)
Gibbs input
- Kiyean Nam (Tue Feb 27 2001 - 20:24:44 PST)
how do I turn on the verbose option?
- Marcela Madrid (Fri Feb 02 2001 - 12:01:46 PST)
how to handle a metal ion
- Mark Forster (Thu Feb 15 2001 - 02:11:24 PST)
- Jake Isaacs (Wed Feb 14 2001 - 07:43:14 PST)
I'm upset !
- Dow Hurst (Thu Feb 01 2001 - 07:40:12 PST)
- Nelson Brito (Thu Feb 01 2001 - 02:51:49 PST)
- samantha hughes (Thu Feb 01 2001 - 02:17:16 PST)
- Stephane (Thu Feb 01 2001 - 01:55:15 PST)
Implicit solvent MD with small RNA's
- Andreas Svrcek-Seiler (Wed Feb 14 2001 - 08:52:56 PST)
Ionic solutions
- Mihaly Mezei (Tue Feb 20 2001 - 14:18:45 PST)
- Elsa Sousa Henriques (Tue Feb 13 2001 - 13:56:18 PST)
- Yong Duan (Tue Feb 13 2001 - 12:49:58 PST)
- Thomas Cheatham (Tue Feb 13 2001 - 10:22:54 PST)
- Elsa Sousa Henriques (Tue Feb 13 2001 - 10:01:08 PST)
- Bill Ross (Mon Feb 12 2001 - 14:52:07 PST)
LEAP and crystal waters
- Michal Otyepka (Mon Feb 26 2001 - 23:35:42 PST)
leap and SP2 nitrogen
- Andrew Gordon Purkiss (Mon Feb 26 2001 - 05:07:26 PST)
- Mark Forster (Mon Feb 26 2001 - 04:07:27 PST)
LES analysis
- Carlos Simmerling (Tue Feb 13 2001 - 10:39:47 PST)
Linux 6.2 install problems
- David Konerding (Mon Feb 26 2001 - 15:32:07 PST)
- Bill Ross (Mon Feb 26 2001 - 14:01:24 PST)
- Ross Walker (Mon Feb 26 2001 - 13:39:02 PST)
Lone Pairs.
- Bayly, Christopher (Thu Feb 08 2001 - 08:39:39 PST)
- Fred P. Arnold (Wed Feb 07 2001 - 14:19:32 PST)
lower_bound and upper_bound
- Yanni Wang (Fri Feb 16 2001 - 07:58:02 PST)
MD integrator
- Garrett W Grahek (Fri Feb 16 2001 - 09:35:43 PST)
MD without SHAKE
- Bill Ross (Wed Feb 28 2001 - 11:25:50 PST)
- Troy Wymore (Wed Feb 28 2001 - 10:59:51 PST)
- Bill Ross (Tue Feb 27 2001 - 08:40:48 PST)
- jim caldwell (Tue Feb 27 2001 - 07:04:25 PST)
- Bill Ross (Mon Feb 26 2001 - 17:51:25 PST)
- Dayle Smith (Mon Feb 26 2001 - 17:06:33 PST)
Minor correction (I think) on RESP input
- Fred P. Arnold (Tue Feb 13 2001 - 09:23:22 PST)
modified aminoacids using Leap
- Bill Ross (Thu Feb 22 2001 - 09:03:16 PST)
- Giulio Rastelli (Thu Feb 22 2001 - 03:14:00 PST)
Nonbonded Pair List
- Troy Bothwell (Fri Feb 02 2001 - 11:18:16 PST)
not using SHAKE
- Michael Cooney (Wed Feb 07 2001 - 08:32:51 PST)
- Eoin Galligan (Wed Feb 07 2001 - 05:27:24 PST)
NSCM in periodic simulations
- Peter Varnai (Thu Feb 01 2001 - 07:24:55 PST)
Nucleic acid notation within Toolchest
- Rebecca Ann Perlow (Mon Feb 19 2001 - 13:59:59 PST)
One article
- Zhiyong Zhang (Tue Feb 13 2001 - 03:46:42 PST)
params - ADP, neutral ARG
- Heather A.Carlson (Mon Feb 26 2001 - 10:58:17 PST)
parm94.dat vs parm99.dat
- Andreas Svrcek-Seiler (Mon Feb 26 2001 - 00:24:00 PST)
parm96
- Giulio Rastelli (Tue Feb 06 2001 - 09:18:25 PST)
PBC box problems
- Bill Ross (Wed Feb 28 2001 - 15:50:16 PST)
- Michael Ford (Wed Feb 28 2001 - 14:34:36 PST)
periodic box size
- Michael Crowley (Sun Feb 18 2001 - 22:48:05 PST)
- Bill Ross (Fri Feb 16 2001 - 12:35:36 PST)
- Guanglei Cui (Fri Feb 16 2001 - 11:48:50 PST)
- Jake Isaacs (Fri Feb 16 2001 - 10:54:25 PST)
- Guanglei Cui (Fri Feb 16 2001 - 10:30:27 PST)
porphyrin parameters
- Bill Ross (Tue Feb 27 2001 - 00:50:34 PST)
- Kristin Maher (Mon Feb 26 2001 - 22:28:43 PST)
ptraj
- Troy Bothwell (Tue Feb 06 2001 - 10:36:20 PST)
QM/MM in roar
- Yanni Wang (Mon Feb 26 2001 - 10:04:03 PST)
Regarding MD
- Andreas Svrcek-Seiler (Sun Feb 11 2001 - 23:26:12 PST)
- dynamic group (Sat Feb 10 2001 - 01:29:42 PST)
Regarding the construction of gris in insightII
- dynamic group (Mon Feb 12 2001 - 01:43:19 PST)
REMD
- Michal Otyepka (Wed Feb 14 2001 - 11:30:06 PST)
Roar
- Yanni Wang (Wed Feb 21 2001 - 01:34:47 PST)
running Amber on dual processor machine
- HAllawi_at_TWT.com (Wed Feb 21 2001 - 11:24:07 PST)
Sander parallel compilation
- David Case (Wed Feb 28 2001 - 10:46:04 PST)
- David Case (Wed Feb 28 2001 - 10:27:40 PST)
sense of justice
- Nelson Teixeira Brito (Thu Feb 01 2001 - 09:53:36 PST)
shake comparison
- Xiaoliang Qian (Fri Feb 23 2001 - 09:13:07 PST)
SUMMARY for GAMESS/GAUSSIAN MEP
- Francois Dupradeau (Wed Jan 31 2001 - 23:37:36 PST)
trajectory-problem
- Miyashita, Osamu (Thu Feb 15 2001 - 09:14:02 PST)
- Christian Pilger (Wed Feb 14 2001 - 17:14:25 PST)
update to 1GHz Athlon
- David Konerding (Tue Feb 20 2001 - 10:25:14 PST)
- Tru Huynh (Tue Feb 20 2001 - 09:22:27 PST)
- David Konerding (Fri Feb 16 2001 - 08:06:38 PST)
- Tru Huynh (Fri Feb 16 2001 - 02:35:59 PST)
your mail
- Krzysztof Murzyn (Thu Feb 22 2001 - 02:45:36 PST)

Amber Archive Feb 2001 by subject