Amber Archive Feb 2001: by author

A.Madhumalar
- Compilation of Amber6 in linux machine (Sun Feb 18 2001 - 00:08:48 PST)
- Compilation of AMBER6 (Thu Feb 15 2001 - 10:36:51 PST)
Agnes Hahn
- Fe4S4 cluster (Thu Feb 22 2001 - 08:06:09 PST)
Andreas Svrcek-Seiler
- parm94.dat vs parm99.dat (Mon Feb 26 2001 - 00:24:00 PST)
- Implicit solvent MD with small RNA's (Wed Feb 14 2001 - 08:52:56 PST)
- Re: Regarding MD (Sun Feb 11 2001 - 23:26:12 PST)
Andrew Gordon Purkiss
- Re: leap and SP2 nitrogen (Mon Feb 26 2001 - 05:07:26 PST)
Anita Ilze Zvaigzne
- Re: AMBER mail reflector archive (Thu Feb 15 2001 - 16:31:43 PST)
Ann Hermone
- Gibbs (Mon Feb 12 2001 - 12:17:51 PST)
Anton Guliaev
- Dual Origin vs dual Alfa (Tue Feb 13 2001 - 16:06:37 PST)
Antonio Entrena Guadix
- Amber Parameters (Wed Feb 14 2001 - 03:04:54 PST)
Bayly, Christopher
- RE: Lone Pairs. (Thu Feb 08 2001 - 08:39:39 PST)
Bill Ross
- Re: PBC box problems (Wed Feb 28 2001 - 15:50:16 PST)
- Re: MD without SHAKE (Wed Feb 28 2001 - 11:25:50 PST)
- Re: MD without SHAKE (Tue Feb 27 2001 - 08:40:48 PST)
- Re: porphyrin parameters (Tue Feb 27 2001 - 00:50:34 PST)
- Re: MD without SHAKE (Mon Feb 26 2001 - 17:51:25 PST)
- Re: Linux 6.2 install problems (Mon Feb 26 2001 - 14:01:24 PST)
- Re: modified aminoacids using Leap (Thu Feb 22 2001 - 09:03:16 PST)
- Re: belly run (Wed Feb 21 2001 - 10:37:03 PST)
- RE: AMBER on SUN (Tue Feb 20 2001 - 11:17:50 PST)
- Re: periodic box size (Fri Feb 16 2001 - 12:35:36 PST)
- RE: AMBER mail reflector archive (Thu Feb 15 2001 - 15:47:31 PST)
- Re: dynamic memory allocation (Wed Feb 14 2001 - 10:21:22 PST)
- dynamic memory allocation (Tue Feb 13 2001 - 11:30:28 PST)
- Re: Ionic solutions (Mon Feb 12 2001 - 14:52:07 PST)
- Re: Bang for the Buck (Fri Feb 09 2001 - 15:51:42 PST)
Carlos Simmerling
- Re: LES analysis (Tue Feb 13 2001 - 10:39:47 PST)
- Re: Bang for the Buck (Fri Feb 09 2001 - 19:59:16 PST)
Christian Pilger
- trajectory-problem (Wed Feb 14 2001 - 17:14:25 PST)
- Re: dynamic memory allocation (Wed Feb 14 2001 - 08:24:47 PST)
- Re: Amber Parameters (Wed Feb 14 2001 - 05:05:55 PST)
- (no subject) (Tue Feb 13 2001 - 11:33:31 PST)
Chuck Schneider
- Re: dynamic memory allocation (Wed Feb 14 2001 - 08:20:02 PST)
Craig Marhefka
- AMBER on SUN (Tue Feb 20 2001 - 06:43:33 PST)
Daniel GENEST
- db4 with amber5.0 (Fri Feb 23 2001 - 09:44:56 PST)
David Case
- Re: Sander parallel compilation (Wed Feb 28 2001 - 10:46:04 PST)
- Re: Sander parallel compilation (Wed Feb 28 2001 - 10:27:40 PST)
David Konerding
- Re: Linux 6.2 install problems (Mon Feb 26 2001 - 15:32:07 PST)
- Re: update to 1GHz Athlon (Tue Feb 20 2001 - 10:25:14 PST)
- Re: Compilation of Amber6 in linux machine (Mon Feb 19 2001 - 07:46:55 PST)
- Re: update to 1GHz Athlon (Fri Feb 16 2001 - 08:06:38 PST)
- Re: Bang for the Buck (Fri Feb 09 2001 - 14:54:13 PST)
David Pearlman
- Re: Bang for the Buck (Fri Feb 09 2001 - 17:16:42 PST)
- Re: Bang for the Buck (Fri Feb 09 2001 - 15:19:12 PST)
Dayle Smith
- MD without SHAKE (Mon Feb 26 2001 - 17:06:33 PST)
Dow Hurst
- Re: I'm upset ! (Thu Feb 01 2001 - 07:40:12 PST)
dynamic group
- Regarding the construction of gris in insightII (Mon Feb 12 2001 - 01:43:19 PST)
- Regarding MD (Sat Feb 10 2001 - 01:29:42 PST)
Elsa Sousa Henriques
- Re: Ionic solutions (Tue Feb 13 2001 - 13:56:18 PST)
- Re: Ionic solutions (Tue Feb 13 2001 - 10:01:08 PST)
Eoin Galligan
- not using SHAKE (Wed Feb 07 2001 - 05:27:24 PST)
- error msg (Mon Feb 05 2001 - 04:44:59 PST)
- error msg (Mon Feb 05 2001 - 04:44:59 PST)
Eva Darian
- 8-Oxo-G (Wed Feb 28 2001 - 10:00:18 PST)
Fernanda Camarinha
- batch mode (Mon Feb 12 2001 - 09:29:07 PST)
Francois Dupradeau
- SUMMARY for GAMESS/GAUSSIAN MEP (Wed Jan 31 2001 - 23:37:36 PST)
Fred P. Arnold
- Minor correction (I think) on RESP input (Tue Feb 13 2001 - 09:23:22 PST)
- Lone Pairs. (Wed Feb 07 2001 - 14:19:32 PST)
Garrett W Grahek
- MD integrator (Fri Feb 16 2001 - 09:35:43 PST)
Giulio Rastelli
- modified aminoacids using Leap (Thu Feb 22 2001 - 03:14:00 PST)
- parm96 (Tue Feb 06 2001 - 09:18:25 PST)
Guanglei Cui
- GB protein simulation (Mon Feb 19 2001 - 08:58:23 PST)
- RE: periodic box size (Fri Feb 16 2001 - 11:48:50 PST)
- RE: periodic box size (Fri Feb 16 2001 - 10:30:27 PST)
HAllawi_at_TWT.com
- running Amber on dual processor machine (Wed Feb 21 2001 - 11:24:07 PST)
Heather A.Carlson
- params - ADP, neutral ARG (Mon Feb 26 2001 - 10:58:17 PST)
Jake Isaacs
- Re: periodic box size (Fri Feb 16 2001 - 10:54:25 PST)
- how to handle a metal ion (Wed Feb 14 2001 - 07:43:14 PST)
- generating parameters for a small molecule ligand (Tue Feb 13 2001 - 08:48:03 PST)
- a few more questions (Mon Feb 12 2001 - 10:37:16 PST)
- Re: batch mode (Mon Feb 12 2001 - 10:18:28 PST)
Jarrod A. Smith
- AMBER mail reflector archive (Thu Feb 15 2001 - 14:54:55 PST)
Jarrod Smith
- Re: Bang for the Buck (Fri Feb 09 2001 - 18:55:10 PST)
- Re: Bang for the Buck (Fri Feb 09 2001 - 18:13:31 PST)
Jianxin Guo
- RE: AMBER mail reflector archive (Thu Feb 15 2001 - 15:13:09 PST)
jim caldwell
- Re: MD without SHAKE (Tue Feb 27 2001 - 07:04:25 PST)
- Re: Compilation of AMBER6 (Thu Feb 15 2001 - 10:20:15 PST)
Khatcharin Siriwong
- Can't run sander_classic with parallel machine (Fri Feb 23 2001 - 09:31:16 PST)
Kiyean Nam
- Gibbs input (Tue Feb 27 2001 - 20:24:44 PST)
Kristin Maher
- porphyrin parameters (Mon Feb 26 2001 - 22:28:43 PST)
Krzysztof Murzyn
- Re: your mail (Thu Feb 22 2001 - 02:45:36 PST)
Lynn Amon
- (no subject) (Tue Feb 13 2001 - 11:39:20 PST)
Mahadevan Seetharaman
- EWALD BOMB (Thu Feb 15 2001 - 14:45:44 PST)
Marcela Madrid
- how do I turn on the verbose option? (Fri Feb 02 2001 - 12:01:46 PST)
Margaret Cheung
- Re: Bang for the Buck (Sat Feb 10 2001 - 23:20:46 PST)
Mark Forster
- leap and SP2 nitrogen (Mon Feb 26 2001 - 04:07:27 PST)
- Re: how to handle a metal ion (Thu Feb 15 2001 - 02:11:24 PST)
Mark Markson
- Belly Atonms (Tue Feb 13 2001 - 12:52:53 PST)
Michael Cooney
- Re: not using SHAKE (Wed Feb 07 2001 - 08:32:51 PST)
Michael Crowley
- Re: periodic box size (Sun Feb 18 2001 - 22:48:05 PST)
Michael Ford
- PBC box problems (Wed Feb 28 2001 - 14:34:36 PST)
Michal Otyepka
- LEAP and crystal waters (Mon Feb 26 2001 - 23:35:42 PST)
- (no subject) (Wed Feb 21 2001 - 12:23:01 PST)
- REMD (Wed Feb 14 2001 - 11:30:06 PST)
Mihaly Mezei
- Re: Ionic solutions (Tue Feb 20 2001 - 14:18:45 PST)
mite51
- Re: Bang for the Buck (Fri Feb 09 2001 - 14:33:44 PST)
Mite51_at_hotmail.com
- Re: disk file larger than 2 GB (Wed Feb 14 2001 - 23:59:25 PST)
Miyashita, Osamu
- Re: Can't run sander_classic with parallel machine (Fri Feb 23 2001 - 09:58:47 PST)
- Amber6 by g77 and mpich (Thu Feb 15 2001 - 12:54:10 PST)
- Re: trajectory-problem (Thu Feb 15 2001 - 09:14:02 PST)
Nathalie Godbout
- Re: Athlon 1GHz (was: Dual Origin vs dual Alfa) (Wed Feb 14 2001 - 12:00:25 PST)
- Re: Dual Origin vs dual Alfa (Wed Feb 14 2001 - 08:18:23 PST)
Nelson Brito
- Re: I'm upset ! (Thu Feb 01 2001 - 02:51:49 PST)
Nelson Teixeira Brito
- sense of justice (Thu Feb 01 2001 - 09:53:36 PST)
noor gaffoor
- (no subject) (Sun Feb 11 2001 - 21:08:17 PST)
Peter Gannett
- ethidium bromide parms (Thu Feb 15 2001 - 18:20:26 PST)
Peter Varnai
- NSCM in periodic simulations (Thu Feb 01 2001 - 07:24:55 PST)
R. M. Fesinmeyer
- Re: Athlon 1GHz (was: Dual Origin vs dual Alfa) (Wed Feb 14 2001 - 12:16:51 PST)
- Re: Athlon 1GHz (was: Dual Origin vs dual Alfa) (Wed Feb 14 2001 - 11:02:11 PST)
- Re: Bang for the Buck (Sat Feb 10 2001 - 03:10:46 PST)
Rebecca Ann Perlow
- Nucleic acid notation within Toolchest (Mon Feb 19 2001 - 13:59:59 PST)
robert
- (no subject) (Tue Feb 13 2001 - 16:35:21 PST)
Robert Matthew Fesinmeyer
- Bang for the Buck (Fri Feb 09 2001 - 13:50:57 PST)
Ross Walker
- RE: Linux 6.2 install problems (Mon Feb 26 2001 - 13:39:02 PST)
- RE: AMBER mail reflector archive (Thu Feb 15 2001 - 15:11:45 PST)
- RE: EWALD BOMB (Thu Feb 15 2001 - 15:10:02 PST)
samantha hughes
- Re: I'm upset ! (Thu Feb 01 2001 - 02:17:16 PST)
Simon Cross
- Re: generating parameters for a small molecule ligand (Wed Feb 14 2001 - 04:40:15 PST)
Stephane
- I'm upset ! (Thu Feb 01 2001 - 01:55:15 PST)
Thomas A. Spraggins
- RE: Compilation of Amber6 in linux machine (Sun Feb 18 2001 - 11:06:14 PST)
Thomas Cheatham
- Re: Ionic solutions (Tue Feb 13 2001 - 10:22:54 PST)
Troy Bothwell
- Fluorescent dyes (Wed Feb 28 2001 - 20:01:47 PST)
- ptraj (Tue Feb 06 2001 - 10:36:20 PST)
- Nonbonded Pair List (Fri Feb 02 2001 - 11:18:16 PST)
Troy Wymore
- Re: MD without SHAKE (Wed Feb 28 2001 - 10:59:51 PST)
Tru Huynh
- Re: update to 1GHz Athlon (Tue Feb 20 2001 - 09:22:27 PST)
- update to 1GHz Athlon (Fri Feb 16 2001 - 02:35:59 PST)
- Athlon 1GHz (was: Dual Origin vs dual Alfa) (Wed Feb 14 2001 - 09:29:53 PST)
Xiaoliang Qian
- shake comparison (Fri Feb 23 2001 - 09:13:07 PST)
Yanni Wang
- QM/MM in roar (Mon Feb 26 2001 - 10:04:03 PST)
- Roar (Wed Feb 21 2001 - 01:34:47 PST)
- lower_bound and upper_bound (Fri Feb 16 2001 - 07:58:02 PST)
Yinghong Sheng
- (no subject) (Wed Feb 14 2001 - 09:45:43 PST)
- AMBER parameter for HCOO(-) and NCHCHNHC (Tue Feb 06 2001 - 15:18:00 PST)
Yong Duan
- RE: AMBER on SUN (Tue Feb 20 2001 - 10:29:41 PST)
- RE: Ionic solutions (Tue Feb 13 2001 - 12:49:58 PST)
Yuguang Mu
- disk file larger than 2 GB (Wed Feb 14 2001 - 23:12:47 PST)
- DMSO ? (Tue Feb 13 2001 - 08:22:42 PST)
ZHANG RB
- consult (Sun Feb 25 2001 - 03:50:47 PST)
- consult (Sun Feb 25 2001 - 03:50:11 PST)
Zhiyong Zhang
- One article (Tue Feb 13 2001 - 03:46:42 PST)

Amber Archive Feb 2001 by author