Re: MD without SHAKE

From: jim caldwell <caldwell_at_heimdal.compchem.ucsf.edu>
Date: Tue 27 Feb 2001 07:04:25 -0800 (PST)

Strictly speaking it should be 0.25fs, you can try
longer steps but watch your simulation carefully
for instability.

jim

On Mon, 26 Feb 2001, Bill Ross wrote:

> My question is, can I run MD for solvated DNA with SHAKE
> turned off? What settings should I use to make sure the
> simulation runs smoothly?
>
> Timestep = 1 fs instead of 2 is the common practise, I believe.
>
> Bill Ross
>


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Received on Tue Feb 27 2001 - 07:04:25 PST
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