Amber Archive Feb 2005 by author
450 messages
:
Starting
Tue Feb 01 2005 - 04:53:01 PST,
Ending
Tue Mar 01 2005 - 07:53:00 PST
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Amber admin
AMBER: creating a new residue
(Mon Feb 28 2005 - 08:44:59 PST)
Re: AMBER: RE:Amber 8 with lam compilation problem
(Wed Feb 23 2005 - 12:39:02 PST)
Andreas Svrcek-Seiler
Re: AMBER: XMGR
(Fri Feb 18 2005 - 12:31:15 PST)
Andrew Box
RE: AMBER: Redhat Enterprise Linux
(Tue Feb 01 2005 - 15:37:55 PST)
AMBER: N Metyl amino acids
(Mon Jan 31 2005 - 21:14:47 PST)
Anselm Horn
AMBER: ptraj8: trajectory windows
(Tue Feb 22 2005 - 09:16:13 PST)
anshul.imtech.res.in
Re: AMBER: installation of amber 8 on windows
(Fri Feb 18 2005 - 06:33:40 PST)
AMBER: installation of amber 8 on windows
(Thu Feb 17 2005 - 12:17:11 PST)
Re: AMBER: Problem in ptraj
(Wed Feb 02 2005 - 14:04:28 PST)
Re: AMBER: Problem in ptraj
(Tue Feb 01 2005 - 14:26:48 PST)
arubin.unmc.edu
AMBER: Cyclic peptide
(Tue Feb 15 2005 - 13:12:28 PST)
Atro Tossavainen
Re: AMBER: Amber8 Solaris installation failure
(Tue Feb 22 2005 - 12:19:31 PST)
Austin B. Yongye
RE: AMBER: Pyranose pucker parameters
(Sun Feb 27 2005 - 19:08:52 PST)
AMBER: Pyranose pucker parameters
(Fri Feb 25 2005 - 21:10:06 PST)
AMBER:
(Fri Feb 25 2005 - 13:43:56 PST)
Re: AMBER: Moil view trajectory clusters
(Thu Feb 17 2005 - 13:31:37 PST)
AMBER: Moil view trajectory clusters
(Thu Feb 17 2005 - 09:36:15 PST)
Beale, John
AMBER: dihedral driver?
(Tue Feb 22 2005 - 08:26:26 PST)
AMBER: XMGR
(Fri Feb 18 2005 - 10:20:44 PST)
AMBER: moil-view
(Thu Feb 17 2005 - 07:56:30 PST)
AMBER:
(Wed Feb 16 2005 - 05:42:26 PST)
AMBER: Convert to Pdb
(Wed Feb 09 2005 - 11:03:27 PST)
AMBER: Linux Enterprise
(Tue Feb 08 2005 - 11:39:54 PST)
AMBER: Minimization
(Tue Feb 08 2005 - 11:30:52 PST)
RE: AMBER: Redhat Enterprise Linux
(Wed Feb 02 2005 - 10:01:53 PST)
AMBER: Redhat Enterprise Linux
(Tue Feb 01 2005 - 09:49:20 PST)
Bill Ross
RE: AMBER: Amber8 Solaris installation failure
(Tue Feb 22 2005 - 16:08:37 PST)
Re: AMBER: Formatting Questions
(Tue Feb 22 2005 - 16:03:26 PST)
Re: AMBER: leap saveamberparm chain types response
(Thu Feb 17 2005 - 17:15:20 PST)
Re: AMBER: Why I couldnt used carnal for analyzed RMSD ?
(Wed Feb 16 2005 - 10:19:30 PST)
Re: AMBER: inconsistent ordering in an improper dihedral of TRP
(Fri Feb 11 2005 - 17:56:10 PST)
RE: AMBER: minimize a ptraj average pdb structure
(Wed Feb 09 2005 - 11:39:27 PST)
Re: AMBER: leap bond angle building
(Tue Feb 08 2005 - 16:00:12 PST)
Re: AMBER: problem in minimization
(Tue Feb 08 2005 - 14:16:47 PST)
Re: AMBER: problem in minimization
(Tue Feb 08 2005 - 12:16:18 PST)
Re: AMBER: Creating an input file for GRASP using AMBER 8
(Mon Feb 07 2005 - 11:40:33 PST)
Re: AMBER: doubts with a new aminoacid
(Tue Feb 01 2005 - 16:36:38 PST)
Re: AMBER: Carnal in Amber8
(Tue Feb 01 2005 - 11:57:19 PST)
Re: AMBER: Carnal in Amber8
(Tue Feb 01 2005 - 11:47:15 PST)
Bogos Agianian
Re: AMBER: Joining residues/units
(Thu Feb 24 2005 - 13:22:07 PST)
AMBER: Joining residues/units
(Thu Feb 24 2005 - 06:58:55 PST)
Brandon Tefft
AMBER: External Electric Field
(Tue Feb 01 2005 - 13:30:22 PST)
Brent Krueger
Re: AMBER: size of solventbox
(Wed Feb 23 2005 - 12:54:35 PST)
Cameron Mura
AMBER: solvateOct method
(Wed Feb 23 2005 - 18:26:19 PST)
Carlos Jaime
Re: AMBER: ptraj for RDF calculations
(Mon Feb 21 2005 - 01:11:22 PST)
Carlos Simmerling
Re: AMBER: mpirun sander8 problem
(Wed Feb 23 2005 - 05:05:01 PST)
Re: AMBER: lastrst
(Tue Feb 22 2005 - 17:39:37 PST)
Re: AMBER: minimizing structures before MM-PBSA?
(Tue Feb 22 2005 - 17:37:18 PST)
Re: AMBER: Restraint of atoms during minimization
(Tue Feb 22 2005 - 09:28:01 PST)
Re: AMBER: vlimit exceeded and temperature blow up
(Tue Feb 22 2005 - 08:46:21 PST)
Re: AMBER: Restraint of atoms during minimization
(Tue Feb 22 2005 - 08:34:06 PST)
Re: AMBER: restraint only for Z cartegian coordinate?
(Tue Feb 22 2005 - 08:02:31 PST)
Re: AMBER: amber8 and moil-view
(Fri Feb 18 2005 - 12:13:03 PST)
Re: AMBER: molecule blowing apart during equilibration
(Fri Feb 18 2005 - 12:11:49 PST)
Re: AMBER: amber8 and moil-view
(Thu Feb 17 2005 - 12:06:42 PST)
Re: AMBER: amber8 and moil-view
(Thu Feb 17 2005 - 11:42:13 PST)
Re: AMBER: Moil view trajectory clusters
(Thu Feb 17 2005 - 10:19:50 PST)
Re: AMBER: moil-view
(Thu Feb 17 2005 - 08:28:15 PST)
Re: AMBER: rms
(Wed Feb 16 2005 - 05:59:43 PST)
Re: AMBER: Cyclic peptide
(Wed Feb 16 2005 - 05:00:29 PST)
Re: AMBER:
(Wed Feb 16 2005 - 04:55:57 PST)
Re: AMBER: soft-cores and Amber
(Tue Feb 15 2005 - 15:11:14 PST)
Re: AMBER: Topology Format Amber 8
(Tue Feb 15 2005 - 04:42:29 PST)
Re: AMBER: inconsistent ordering in an improper dihedral of TRP
(Fri Feb 11 2005 - 15:41:26 PST)
Re: AMBER: too much vacuum in the box created by Leap
(Fri Feb 11 2005 - 05:21:23 PST)
Re: AMBER: Can REM be used as multiple normal sander jobs on parallel machine
(Wed Feb 09 2005 - 16:03:55 PST)
Re: AMBER: problem in minimization
(Tue Feb 08 2005 - 13:47:30 PST)
Re: AMBER: How to calculate RESTRAINT value
(Tue Feb 08 2005 - 05:01:46 PST)
Re: AMBER: Dynamics error
(Tue Feb 08 2005 - 04:59:04 PST)
Re: AMBER: N Metyl amino acids
(Tue Feb 01 2005 - 04:47:30 PST)
Cenk Andac
AMBER: rotameric populations?
(Thu Feb 17 2005 - 07:15:05 PST)
Re: AMBER: Cu++ and RED
(Mon Feb 14 2005 - 21:30:47 PST)
RE: AMBER: running shell scripts in tleap?
(Mon Feb 14 2005 - 21:24:44 PST)
AMBER: running shell scripts in tleap?
(Mon Feb 14 2005 - 14:23:44 PST)
AMBER: Cu++ and RED
(Fri Feb 11 2005 - 01:46:13 PST)
Chris Moth
Re: AMBER: stereo
(Wed Feb 09 2005 - 12:02:13 PST)
claudio
AMBER: Free energy extimate for the same structure but different conformers
(Mon Feb 21 2005 - 12:56:10 PST)
darden
Re: AMBER: EWALD and belly not strictly correct
(Wed Feb 16 2005 - 09:08:31 PST)
David A. Case
Re: AMBER: Amber8 Solaris installation failure
(Mon Feb 28 2005 - 14:42:21 PST)
Re: AMBER: PDB conversion to gzmat using antechamber
(Mon Feb 28 2005 - 10:02:58 PST)
Re: AMBER: GBSA calculation
(Mon Feb 28 2005 - 09:48:24 PST)
Re: AMBER: vlimit problem
(Mon Feb 28 2005 - 09:40:26 PST)
Re: AMBER: correlation
(Mon Feb 28 2005 - 09:32:54 PST)
Re: AMBER: problem with solvateBox
(Fri Feb 25 2005 - 13:41:38 PST)
Re: AMBER: ambpdb radii
(Fri Feb 25 2005 - 10:15:57 PST)
Re: AMBER: make test.lmod error
(Fri Feb 25 2005 - 09:41:32 PST)
Re: AMBER: solvateOct method
(Fri Feb 25 2005 - 08:53:19 PST)
Re: AMBER: ambpdb radii
(Fri Feb 25 2005 - 08:09:53 PST)
Re: AMBER: Does delta.charge mean "final charge" for a dummy atom?
(Thu Feb 24 2005 - 18:31:04 PST)
Re: AMBER: ambpdb radii
(Thu Feb 24 2005 - 16:56:40 PST)
Re: AMBER: Joining residues/units
(Thu Feb 24 2005 - 12:54:37 PST)
Re: AMBER: Use of ibelly with nmode analysis
(Thu Feb 24 2005 - 08:30:31 PST)
Re: AMBER: convert one functional group to another with TI
(Wed Feb 23 2005 - 15:01:42 PST)
Re: AMBER: convert one functional group to another with TI
(Wed Feb 23 2005 - 14:46:55 PST)
Re: AMBER: lastrst
(Tue Feb 22 2005 - 21:53:28 PST)
Re: AMBER: convert one functional group to another with TI
(Tue Feb 22 2005 - 21:44:41 PST)
Re: AMBER: total energy of solvation
(Tue Feb 22 2005 - 21:40:47 PST)
Re: AMBER: Amber8 Solaris installation failure
(Tue Feb 22 2005 - 16:52:13 PST)
Re: AMBER: Restraint of atoms during minimization
(Tue Feb 22 2005 - 09:19:17 PST)
Re: AMBER: Formatting Questions
(Mon Feb 21 2005 - 17:33:34 PST)
Re: AMBER: problem with protein minimization
(Mon Feb 21 2005 - 16:11:37 PST)
Re: AMBER: AIX problem
(Mon Feb 21 2005 - 16:05:40 PST)
Re: AMBER: Free energy extimate for the same structure but different conformers
(Mon Feb 21 2005 - 16:00:39 PST)
Re: AMBER: DNA Tutorial
(Mon Feb 21 2005 - 15:52:21 PST)
Re: AMBER: separate solvent-solvent and solvent-solute interaction
(Mon Feb 21 2005 - 09:07:24 PST)
Re: AMBER: Compiling/Runing on BSD - emulation and/or gfortran (Linux and BSD)
(Thu Feb 17 2005 - 23:56:20 PST)
Re: AMBER: Compiling/Runing on BSD - emulation and/or gfortran (Linux and BSD)
(Thu Feb 17 2005 - 23:41:23 PST)
Re: AMBER: Amber8 Solaris installation failure
(Thu Feb 17 2005 - 18:31:00 PST)
Re: AMBER: Amber7 nmropt
(Wed Feb 16 2005 - 13:53:19 PST)
Re: AMBER: EWALD and belly not strictly correct
(Wed Feb 16 2005 - 08:52:20 PST)
Re: AMBER:
(Wed Feb 16 2005 - 08:49:18 PST)
AMBER: soft-cores and Amber
(Tue Feb 15 2005 - 14:55:30 PST)
Re: AMBER: Dummy Atom Types on both states
(Tue Feb 15 2005 - 14:26:21 PST)
Re: AMBER: check in leap
(Tue Feb 15 2005 - 13:17:07 PST)
Re: AMBER: reverse TI charge perturbation
(Sat Feb 12 2005 - 16:14:58 PST)
Re: AMBER: nucgen problem
(Fri Feb 11 2005 - 17:37:32 PST)
Re: AMBER: desc NEWRES and blank unit type
(Fri Feb 11 2005 - 14:24:25 PST)
Re: AMBER: inconsistent ordering in an improper dihedral of TRP
(Fri Feb 11 2005 - 14:19:03 PST)
Re: AMBER: ptraj error and min problems
(Fri Feb 11 2005 - 08:29:42 PST)
Re: AMBER: too much vacuum in the box created by Leap
(Fri Feb 11 2005 - 08:21:29 PST)
Re: AMBER: Poisson Boltzmann dynamics error
(Thu Feb 10 2005 - 08:57:51 PST)
Re: AMBER: question about surface area to GBsurf calculation
(Thu Feb 10 2005 - 07:55:33 PST)
Re: AMBER: DIVCON optimization
(Wed Feb 09 2005 - 18:22:07 PST)
Re: AMBER: DIVCON optimization
(Wed Feb 09 2005 - 12:22:59 PST)
Re: AMBER: minimization.out
(Wed Feb 09 2005 - 11:53:41 PST)
Re: AMBER: problem in minimization
(Tue Feb 08 2005 - 14:23:51 PST)
Re: AMBER: Amber8 installation test possible failures
(Tue Feb 08 2005 - 12:02:54 PST)
Re: AMBER: Linux Enterprise
(Tue Feb 08 2005 - 11:59:15 PST)
Re: AMBER: problem in minimization
(Tue Feb 08 2005 - 11:51:42 PST)
Re: AMBER: tleap load pdb file
(Tue Feb 08 2005 - 11:50:08 PST)
Re: AMBER: MMGBSA and dielectric constant with AMBER8 - dielc and intdiel
(Tue Feb 08 2005 - 11:28:23 PST)
Re: AMBER: problem in writing
(Mon Feb 07 2005 - 15:22:05 PST)
Re: AMBER: Tutorial Request
(Sun Feb 06 2005 - 09:40:28 PST)
Re: AMBER: loading pdb in leap to create parmeter files
(Sat Feb 05 2005 - 14:29:13 PST)
Re: AMBER: Antechamber/formatting question
(Sat Feb 05 2005 - 11:17:24 PST)
Re: AMBER: huge bond distances in new residue
(Sat Feb 05 2005 - 10:57:37 PST)
Re: AMBER: trajectory of minimization
(Sat Feb 05 2005 - 10:54:39 PST)
Re: AMBER: Is droplet boundary condition option possible ?
(Sat Feb 05 2005 - 10:53:53 PST)
Re: AMBER: unnatural ligand
(Fri Feb 04 2005 - 14:54:06 PST)
Re: AMBER: dppsv returns error code: 29
(Fri Feb 04 2005 - 14:48:38 PST)
Re: AMBER: tleap load pdb file
(Fri Feb 04 2005 - 14:45:50 PST)
Re: AMBER: tleap load pdb file
(Fri Feb 04 2005 - 08:35:49 PST)
Re: AMBER: protonate and input conversion error
(Thu Feb 03 2005 - 10:09:31 PST)
Re: AMBER: gaff frcmod file for TI calculation
(Wed Feb 02 2005 - 16:44:13 PST)
Re: AMBER: sander segmentation fault
(Wed Feb 02 2005 - 14:39:06 PST)
Re: AMBER: sander segmentation fault
(Wed Feb 02 2005 - 11:28:37 PST)
Re: AMBER: Multiple dihedral restraints (follow up)
(Wed Feb 02 2005 - 11:04:47 PST)
Re: AMBER: change of prmtop file
(Wed Feb 02 2005 - 10:21:34 PST)
Re: AMBER: External Electric Field
(Wed Feb 02 2005 - 10:08:59 PST)
Re: AMBER: doubts with a new aminoacid
(Tue Feb 01 2005 - 15:35:36 PST)
Re: AMBER: Multiple dihedral restraints
(Tue Feb 01 2005 - 14:54:49 PST)
Re: AMBER: Carnal in Amber8
(Tue Feb 01 2005 - 09:27:25 PST)
David E. Konerding DSD staff
Re: AMBER: generate charmm paramater file from amber parm file
(Wed Feb 16 2005 - 10:13:23 PST)
Re: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 12:48:50 PST)
David Mathews
Re: AMBER: installation of amber 8 on windows
(Sat Feb 19 2005 - 08:01:54 PST)
Re: AMBER: installation of amber 8 on windows
(Thu Feb 17 2005 - 08:42:05 PST)
david.evans.ulsop.ac.uk
Re: AMBER: nmode entropy calculations in MMPBSA
(Fri Feb 25 2005 - 06:14:55 PST)
Re: AMBER: generate charmm paramater file from amber parm file
(Wed Feb 16 2005 - 10:02:07 PST)
Re: AMBER: Dummy Atom Types on both states
(Tue Feb 15 2005 - 10:13:57 PST)
Re: AMBER: Dummy Atom Types on both states
(Tue Feb 15 2005 - 09:29:39 PST)
dkohen.carleton.edu
AMBER: amber 8 system requirements
(Wed Feb 02 2005 - 10:28:48 PST)
Dwayne Hoobler
RE: AMBER: DNA Tutorial
(Mon Feb 21 2005 - 12:26:37 PST)
AMBER: DNA Tutorial
(Fri Feb 18 2005 - 15:07:34 PST)
Eric Hu
Re: AMBER: Does delta.charge mean "final charge" for a dummy atom?
(Fri Feb 25 2005 - 16:38:05 PST)
AMBER: Does delta.charge mean "final charge" for a dummy atom?
(Thu Feb 24 2005 - 17:22:23 PST)
Re: AMBER: convert one functional group to another with TI
(Wed Feb 23 2005 - 15:18:29 PST)
Re: AMBER: convert one functional group to another with TI
(Tue Feb 22 2005 - 22:36:03 PST)
AMBER: convert one functional group to another with TI
(Tue Feb 22 2005 - 17:29:42 PST)
Re: AMBER: reverse TI charge perturbation
(Mon Feb 14 2005 - 16:42:14 PST)
AMBER: reverse TI charge perturbation
(Fri Feb 11 2005 - 17:59:10 PST)
AMBER: minimize a ptraj average pdb structure
(Tue Feb 08 2005 - 17:48:26 PST)
Re: AMBER: unnatural ligand
(Mon Feb 07 2005 - 10:28:14 PST)
AMBER: unnatural ligand
(Thu Feb 03 2005 - 19:37:41 PST)
Re: AMBER: gaff frcmod file for TI calculation
(Wed Feb 02 2005 - 17:47:32 PST)
AMBER: gaff frcmod file for TI calculation
(Wed Feb 02 2005 - 15:50:00 PST)
Fabien Cailliez
AMBER: nmode entropy calculations in MMPBSA
(Fri Feb 25 2005 - 02:20:23 PST)
Re: AMBER: size of solventbox
(Wed Feb 23 2005 - 03:21:52 PST)
Re: AMBER: problem with ptraj and randomizeions
(Fri Feb 18 2005 - 00:50:00 PST)
AMBER: problem with ptraj and randomizeions
(Thu Feb 17 2005 - 09:56:24 PST)
AMBER: MMGBSA and dielectric constant with AMBER8 - dielc and intdiel
(Tue Feb 08 2005 - 09:16:51 PST)
Filip Lankas
Re: AMBER: problem with ptraj and randomizeions
(Fri Feb 18 2005 - 04:19:10 PST)
AMBER: stereo
(Wed Feb 09 2005 - 09:53:45 PST)
Furse, Kristina Elisabet
Re: AMBER: lastrst
(Wed Feb 23 2005 - 13:36:08 PST)
Re: AMBER: sander segmentation fault
(Wed Feb 02 2005 - 15:32:25 PST)
Re: AMBER: Problem in ptraj
(Wed Feb 02 2005 - 10:16:03 PST)
Re: AMBER: Problem in ptraj
(Tue Feb 01 2005 - 11:30:53 PST)
FyD
Re: AMBER: Antechamber/formatting question
(Sun Feb 27 2005 - 20:43:23 PST)
Re: AMBER: Antechamber/formatting question
(Sun Feb 27 2005 - 20:12:37 PST)
Re: AMBER: Joining residues/units
(Fri Feb 25 2005 - 09:13:29 PST)
Re: AMBER: Cu++ and RED
(Tue Feb 15 2005 - 10:19:16 PST)
Re: AMBER: Cu++ and RED
(Fri Feb 11 2005 - 09:23:53 PST)
Re: AMBER: Creating an input file for GRASP using AMBER 8
(Mon Feb 07 2005 - 14:45:05 PST)
Re: AMBER: Creating an input file for GRASP using AMBER 8
(Mon Feb 07 2005 - 11:52:42 PST)
Germán Sciaini
Re: AMBER: size of solventbox
(Wed Feb 23 2005 - 02:50:39 PST)
AMBER: clusters
(Fri Feb 04 2005 - 04:36:48 PST)
RE: AMBER: non-periodic condition
(Thu Feb 03 2005 - 12:42:34 PST)
Greg Recine
AMBER: Compiling/Runing on BSD - emulation and/or gfortran (Linux and BSD)
(Thu Feb 17 2005 - 16:23:01 PST)
gsciaini
AMBER: non-periodic condition
(Thu Feb 03 2005 - 08:40:46 PST)
Guanglei Cui
Re: AMBER: ico(i)=-1?
(Sat Feb 26 2005 - 07:42:08 PST)
Re: FW: AMBER: mpirun sander8 problem
(Thu Feb 24 2005 - 07:46:05 PST)
Re: AMBER: change of prmtop file
(Wed Feb 02 2005 - 10:03:53 PST)
Guillaume Bollot
AMBER: AMBER 8 : Water cap problem
(Mon Feb 14 2005 - 05:14:20 PST)
Gustavo Pierdominici Sottile
AMBER: vlimit
(Fri Feb 25 2005 - 04:45:35 PST)
AMBER: correlation
(Thu Feb 24 2005 - 11:48:50 PST)
AMBER: classes
(Wed Feb 23 2005 - 13:00:47 PST)
AMBER: ptraj
(Fri Feb 18 2005 - 06:58:37 PST)
AMBER: rms
(Wed Feb 16 2005 - 05:14:50 PST)
AMBER:
(Wed Feb 16 2005 - 04:22:59 PST)
AMBER: check in leap
(Tue Feb 15 2005 - 11:34:21 PST)
AMBER: blows up
(Tue Feb 15 2005 - 11:11:43 PST)
AMBER: constrains
(Mon Feb 14 2005 - 06:53:18 PST)
AMBER: vlimit
(Mon Feb 14 2005 - 04:23:31 PST)
AMBER: archive
(Fri Feb 11 2005 - 06:58:33 PST)
AMBER: ptraj error and min problems
(Fri Feb 11 2005 - 06:54:23 PST)
AMBER: minimization.out
(Wed Feb 09 2005 - 11:32:01 PST)
AMBER: energy plot in minimization
(Wed Feb 09 2005 - 09:36:25 PST)
AMBER: problem in minimization
(Tue Feb 08 2005 - 10:31:17 PST)
AMBER: problem in writing
(Mon Feb 07 2005 - 11:59:49 PST)
AMBER: change of prmtop file
(Wed Feb 02 2005 - 07:43:34 PST)
AMBER: doubts with a new aminoacid
(Tue Feb 01 2005 - 12:28:52 PST)
Harianto
Re: AMBER: ambpdb radii
(Fri Feb 25 2005 - 10:41:59 PST)
Re: AMBER: ambpdb radii
(Fri Feb 25 2005 - 08:20:31 PST)
AMBER: ambpdb radii
(Thu Feb 24 2005 - 11:24:39 PST)
HL Eastwood
AMBER: generate charmm paramater file from amber parm file
(Wed Feb 16 2005 - 09:19:56 PST)
Holly Freedman
AMBER: total energy of solvation
(Tue Feb 22 2005 - 20:05:36 PST)
HuiZhe Li
AMBER: compile amber8 on RHEL4
(Thu Feb 24 2005 - 23:59:02 PST)
Ian Withers
Re: AMBER: Topology Format Amber 8
(Tue Feb 15 2005 - 05:33:15 PST)
Ilyas Yildirim
AMBER: vlimit problem
(Fri Feb 25 2005 - 17:45:03 PST)
Re: AMBER: Antechamber/formatting question
(Fri Feb 25 2005 - 17:31:46 PST)
Re: AMBER: lastrst
(Tue Feb 22 2005 - 18:36:00 PST)
AMBER: Dummy Atom Types on both states
(Mon Feb 14 2005 - 18:29:03 PST)
AMBER: nucgen problem
(Fri Feb 11 2005 - 16:56:41 PST)
Re: AMBER: Creating an input file for GRASP using AMBER 8
(Mon Feb 07 2005 - 14:24:24 PST)
AMBER: Creating an input file for GRASP using AMBER 8
(Mon Feb 07 2005 - 11:07:29 PST)
James W. Caldwell
RE: AMBER: MPI for sander8
(Tue Feb 22 2005 - 11:52:56 PST)
Jaroslav Hanus
Re: AMBER: restraint only for Z cartegian coordinate?
(Fri Feb 25 2005 - 03:12:48 PST)
AMBER: restraint only for Z cartegian coordinate?
(Tue Feb 22 2005 - 07:40:58 PST)
Javier Perez Miron
AMBER: ptraj for RDF calculations
(Mon Feb 21 2005 - 00:42:33 PST)
AMBER: ptraj for RDF calculations
(Sat Feb 19 2005 - 08:47:02 PST)
Jiten
AMBER: amber8 in IBM-SP4
(Mon Jan 31 2005 - 19:32:28 PST)
Joe Nolan
Re: AMBER: Amber8 Solaris installation failure
(Mon Feb 28 2005 - 12:24:28 PST)
Re: AMBER: Amber8 Solaris installation failure
(Tue Feb 22 2005 - 15:34:50 PST)
Re: AMBER: Amber8 Solaris installation failure
(Tue Feb 22 2005 - 12:12:02 PST)
AMBER: Amber8 Solaris installation failure
(Thu Feb 17 2005 - 12:27:12 PST)
AMBER: Amber8 installation test possible failures
(Tue Feb 08 2005 - 11:55:39 PST)
John Bushnell
Re: AMBER: running shell scripts in tleap?
(Mon Feb 14 2005 - 15:32:32 PST)
Joseph Fernandez
AMBER: Multiple dihedral restraints (follow up)
(Wed Feb 02 2005 - 10:11:01 PST)
AMBER: Multiple dihedral restraints
(Tue Feb 01 2005 - 09:29:40 PST)
Julien Michel
Re: AMBER: Dummy Atom Types on both states
(Tue Feb 15 2005 - 08:10:34 PST)
Junmei Wang
RE: AMBER: gaussian output file
(Tue Feb 01 2005 - 15:03:22 PST)
Jyh-Shyong Ho
AMBER: parallel AMBER/pmemd installation problem on Opteron
(Tue Feb 22 2005 - 21:08:22 PST)
Kara Di Giorgio
Re: AMBER: Antechamber/formatting question
(Sun Feb 27 2005 - 17:13:19 PST)
Re: AMBER: Antechamber/formatting question
(Fri Feb 25 2005 - 18:02:40 PST)
Re: AMBER: Antechamber/formatting question
(Fri Feb 25 2005 - 16:43:36 PST)
Re: AMBER: Formatting Questions
(Tue Feb 22 2005 - 13:48:46 PST)
Re: AMBER: Formatting Questions
(Mon Feb 21 2005 - 18:03:37 PST)
AMBER: Formatting Questions
(Mon Feb 21 2005 - 11:09:44 PST)
Re: AMBER: Antechamber/formatting question
(Fri Feb 18 2005 - 10:20:40 PST)
AMBER: Antechamber help needed
(Thu Feb 17 2005 - 09:24:34 PST)
AMBER: DIVCON optimization
(Wed Feb 09 2005 - 11:46:03 PST)
AMBER: Tutorial Request
(Sun Feb 06 2005 - 09:01:15 PST)
AMBER: Antechamber/formatting question
(Fri Feb 04 2005 - 15:05:18 PST)
Kara Wald
AMBER: Mainchain example needed
(Mon Feb 14 2005 - 13:43:06 PST)
Re: AMBER: DIVCON optimization
(Wed Feb 09 2005 - 15:30:07 PST)
L Jin
Re: AMBER: Restraint of atoms during minimization
(Tue Feb 22 2005 - 09:12:13 PST)
AMBER: Restraint of atoms during minimization
(Tue Feb 22 2005 - 08:17:05 PST)
AMBER: Phi-Psi-Energy plot
(Wed Feb 16 2005 - 07:45:18 PST)
Lars Packschies
Re: AMBER: parallel AMBER/pmemd installation problem on Opteron
(Thu Feb 24 2005 - 15:58:25 PST)
Re: AMBER: parallel AMBER/pmemd installation problem on Opteron
(Wed Feb 23 2005 - 08:22:59 PST)
lei jia
AMBER: DNA melting free energy calculation
(Thu Feb 03 2005 - 16:39:57 PST)
Lihua Wang
Re: AMBER: amber8 and moil-view
(Thu Feb 17 2005 - 12:14:04 PST)
Re: AMBER: amber8 and moil-view
(Thu Feb 17 2005 - 11:52:08 PST)
AMBER: amber8 and moil-view
(Thu Feb 17 2005 - 11:26:32 PST)
Re: AMBER: running shell scripts in tleap?
(Mon Feb 14 2005 - 15:26:31 PST)
Liu, Jingyuan
AMBER: Protonate state of ARG and LYS.
(Thu Feb 10 2005 - 13:56:39 PST)
m m
AMBER: Amber 8 with lam compilation problem
(Mon Feb 21 2005 - 00:55:49 PST)
M. L. Dodson
Re: AMBER: Amber8 Solaris installation failure
(Mon Feb 28 2005 - 12:55:47 PST)
Re: AMBER: Amber8 Solaris installation failure
(Tue Feb 22 2005 - 18:33:31 PST)
Re: AMBER: Compiling/Runing on BSD - emulation and/or gfortran (Linux and BSD)
(Thu Feb 17 2005 - 18:21:29 PST)
Re: AMBER: Convert to Pdb
(Wed Feb 09 2005 - 11:28:22 PST)
Re: AMBER: Multiple dihedral restraints (follow up)
(Thu Feb 03 2005 - 12:07:11 PST)
Maciej
AMBER: How to build dynamics input for guanine with tleap ?
(Thu Feb 24 2005 - 05:44:37 PST)
AMBER: RE:Amber 8 with lam compilation problem
(Wed Feb 23 2005 - 23:43:53 PST)
Maciej KA
AMBER: RE:Amber 8 with lam compilation problem
(Wed Feb 23 2005 - 00:07:37 PST)
AMBER: RE:Amber 8 with lam compilation problem
(Tue Feb 22 2005 - 23:08:16 PST)
Marie-Pierre Durrieu
Re: AMBER: problem with ptraj and randomizeions
(Fri Feb 18 2005 - 02:19:06 PST)
Re: AMBER: problem with ptraj and randomizeions
(Fri Feb 18 2005 - 01:49:16 PST)
AMBER: too much vacuum in the box created by Leap
(Fri Feb 11 2005 - 04:53:35 PST)
AMBER: vacuum bubbles in system equilibration
(Tue Feb 01 2005 - 02:56:21 PST)
Markus W. Germann
Re: AMBER: Amber7 nmropt
(Wed Feb 16 2005 - 13:40:46 PST)
AMBER: Amber7 nmropt
(Wed Feb 16 2005 - 13:09:08 PST)
marti
Re: AMBER: Use of ibelly with nmode analysis
(Thu Feb 24 2005 - 03:47:28 PST)
mathew k varghese
AMBER: size of solventbox
(Tue Feb 22 2005 - 20:07:00 PST)
Mayumi Haga
AMBER: ptraj problem
(Tue Feb 22 2005 - 01:38:43 PST)
RE: AMBER: AIX problem
(Mon Feb 21 2005 - 16:45:33 PST)
AMBER: AIX problem
(Sun Feb 20 2005 - 21:17:29 PST)
AMBER: How to calculate RESTRAINT value
(Mon Feb 07 2005 - 20:09:25 PST)
michael chen
AMBER: Another question about surface area calculation
(Wed Feb 09 2005 - 22:26:00 PST)
AMBER: question about surface area to GBsurf calculation
(Wed Feb 09 2005 - 22:20:58 PST)
AMBER: question about mm_gbsa output file
(Wed Feb 09 2005 - 10:10:06 PST)
mrbroad.ilstu.edu
AMBER: loading pdb in leap to create parmeter files
(Sat Feb 05 2005 - 13:24:04 PST)
Natasja Brooijmans
Re: AMBER: problem in minimization
(Tue Feb 08 2005 - 11:56:22 PST)
opitz.che.udel.edu
AMBER: Restart Problem
(Mon Feb 14 2005 - 11:12:54 PST)
Pavan G
AMBER: Controlling number of water residues...
(Mon Feb 28 2005 - 23:14:51 PST)
Peter Gannett
Re: AMBER: Convert to Pdb
(Wed Feb 09 2005 - 11:07:07 PST)
Peter Varnai
Re: AMBER: pmemd + pgi 5.1 + ntr = 1
(Thu Feb 24 2005 - 14:59:16 PST)
AMBER: pmemd + pgi 5.1 + ntr = 1
(Thu Feb 24 2005 - 14:25:04 PST)
Piotr Cieplak
Re: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 13:58:09 PST)
Re: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 12:55:59 PST)
RE: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 11:01:15 PST)
AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 10:28:02 PST)
Pradipta Bandyopadhyay
AMBER: Compilation problem at dual processor linux !
(Wed Feb 02 2005 - 04:32:52 PST)
praveena moldy
AMBER: Amber Poisson-Boltzmann MD :Equilibration Problem
(Sun Feb 27 2005 - 21:36:36 PST)
qlu.notes.cc.sunysb.edu
AMBER: Can REM be used as multiple normal sander jobs on parallel machine
(Wed Feb 09 2005 - 15:15:59 PST)
Rachel Burdge
Re: AMBER: sander errors with atom restraints on ia64
(Fri Feb 18 2005 - 08:04:17 PST)
AMBER: sander errors with atom restraints on ia64
(Thu Feb 17 2005 - 13:46:04 PST)
Re: AMBER: Poisson Boltzmann dynamics error
(Thu Feb 10 2005 - 10:51:05 PST)
AMBER: Poisson Boltzmann dynamics error
(Thu Feb 10 2005 - 08:04:55 PST)
Ray Luo
Re: AMBER: Poisson Boltzmann dynamics error
(Tue Feb 08 2005 - 04:13:58 PST)
ReichertD.mir.wustl.edu
AMBER: problem with solvateBox
(Fri Feb 25 2005 - 12:38:51 PST)
Robert Duke
AMBER: My last posting
(Thu Feb 24 2005 - 20:15:08 PST)
Re: AMBER: parallel AMBER/pmemd installation problem on Opteron
(Thu Feb 24 2005 - 20:06:54 PST)
Re: AMBER: pmemd + pgi 5.1 + ntr = 1
(Thu Feb 24 2005 - 15:22:37 PST)
Re: AMBER: pmemd + pgi 5.1 + ntr = 1
(Thu Feb 24 2005 - 14:38:02 PST)
Re: AMBER: RE:Amber 8 with lam compilation problem
(Thu Feb 24 2005 - 05:54:08 PST)
Re: AMBER: parallel AMBER/pmemd installation problem on Opteron
(Wed Feb 23 2005 - 09:27:13 PST)
Re: AMBER: parallel AMBER/pmemd installation problem on Opteron
(Wed Feb 23 2005 - 05:17:54 PST)
Re: AMBER: problem with protein minimization
(Tue Feb 22 2005 - 09:10:51 PST)
AMBER: Re: pmemd problems
(Thu Feb 17 2005 - 07:15:33 PST)
Re: AMBER: Amber7 nmropt
(Wed Feb 16 2005 - 15:05:37 PST)
Re: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 13:25:52 PST)
Re: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 11:43:37 PST)
Ross Walker
RE: AMBER: Pyranose pucker parameters
(Sun Feb 27 2005 - 11:58:30 PST)
RE: AMBER: Antechamber/formatting question
(Sun Feb 27 2005 - 11:56:18 PST)
RE: AMBER: RE:Amber 8 with lam compilation problem
(Wed Feb 23 2005 - 10:02:47 PST)
RE: AMBER: RE:Amber 8 with lam compilation problem
(Tue Feb 22 2005 - 23:20:54 PST)
RE: AMBER: size of solventbox
(Tue Feb 22 2005 - 21:22:03 PST)
RE: AMBER: Amber8 Solaris installation failure
(Tue Feb 22 2005 - 15:55:17 PST)
RE: AMBER: MPI for sander8
(Tue Feb 22 2005 - 09:54:37 PST)
RE: AMBER: problem with protein minimization
(Tue Feb 22 2005 - 08:47:56 PST)
RE: AMBER: Amber 8 with lam compilation problem
(Mon Feb 21 2005 - 01:20:21 PST)
RE: AMBER: Amber: sander error segmentation fault.
(Fri Feb 18 2005 - 22:34:22 PST)
RE: AMBER: DNA Tutorial
(Fri Feb 18 2005 - 17:15:31 PST)
RE: AMBER: molecule blowing apart during equilibration
(Fri Feb 18 2005 - 08:56:30 PST)
RE: AMBER: Amber7 nmropt
(Wed Feb 16 2005 - 13:55:40 PST)
RE: AMBER: Amber7 nmropt
(Wed Feb 16 2005 - 13:32:05 PST)
RE: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 10:50:53 PST)
RE: AMBER: running shell scripts in tleap?
(Mon Feb 14 2005 - 15:31:03 PST)
RE: AMBER: Restart Problem
(Mon Feb 14 2005 - 12:01:16 PST)
RE: AMBER: vlimit
(Mon Feb 14 2005 - 09:14:56 PST)
RE: AMBER: constrains
(Mon Feb 14 2005 - 09:10:42 PST)
RE: AMBER: AMBER 8 : Water cap problem
(Mon Feb 14 2005 - 09:07:21 PST)
RE: AMBER:
(Mon Feb 14 2005 - 09:03:52 PST)
RE: AMBER: Poisson Boltzmann dynamics error
(Thu Feb 10 2005 - 09:03:46 PST)
RE: AMBER: Convert to Pdb
(Wed Feb 09 2005 - 11:19:15 PST)
RE: AMBER: tleap load pdb file
(Wed Feb 09 2005 - 11:18:31 PST)
RE: AMBER: energy plot in minimization
(Wed Feb 09 2005 - 10:10:13 PST)
RE: AMBER: Amber8 installation test possible failures
(Tue Feb 08 2005 - 12:17:40 PST)
RE: AMBER: Linux Enterprise
(Tue Feb 08 2005 - 11:59:43 PST)
RE: AMBER: tleap load pdb file
(Sun Feb 06 2005 - 10:50:29 PST)
RE: AMBER: trajectory of minimization
(Sun Feb 06 2005 - 10:36:29 PST)
RE: AMBER: non-periodic condition
(Thu Feb 03 2005 - 10:27:30 PST)
RE: AMBER: sander segmentation fault
(Wed Feb 02 2005 - 18:05:41 PST)
RE: AMBER: amber 8 system requirements
(Wed Feb 02 2005 - 10:47:55 PST)
RE: AMBER: Compilation problem at dual processor linux !
(Wed Feb 02 2005 - 09:52:10 PST)
S. Frank Yan
Re: AMBER: mpirun sander8 problem
(Thu Feb 24 2005 - 08:30:23 PST)
FW: AMBER: mpirun sander8 problem
(Thu Feb 24 2005 - 00:41:14 PST)
RE: AMBER: mpirun sander8 problem
(Wed Feb 23 2005 - 08:58:08 PST)
AMBER: mpirun sander8 problem
(Tue Feb 22 2005 - 23:13:34 PST)
AMBER: MPI for sander8
(Tue Feb 22 2005 - 09:04:56 PST)
RE: AMBER: Linux Enterprise
(Tue Feb 08 2005 - 11:45:40 PST)
RE: AMBER: Redhat Enterprise Linux
(Tue Feb 01 2005 - 09:57:00 PST)
S.Sundar Raman
AMBER: Amber: sander error segmentation fault.
(Fri Feb 18 2005 - 22:03:50 PST)
Re: AMBER:how to analyse trajectory files
(Mon Feb 14 2005 - 20:58:19 PST)
AMBER:how to analyse trajectory files
(Mon Feb 14 2005 - 01:17:39 PST)
AMBER:
(Mon Feb 14 2005 - 01:03:27 PST)
Re: AMBER: Dynamics error
(Tue Feb 08 2005 - 06:09:04 PST)
AMBER: Dynamics error
(Tue Feb 08 2005 - 03:25:07 PST)
AMBER: dynamics error
(Tue Feb 08 2005 - 03:10:19 PST)
Sanghyun Park
AMBER: inconsistent ordering in an improper dihedral of TRP
(Sun Feb 06 2005 - 20:38:03 PST)
scopio
AMBER: minimizing structures before MM-PBSA?
(Tue Feb 22 2005 - 17:23:37 PST)
Re: AMBER: ptraj problem
(Tue Feb 22 2005 - 02:08:28 PST)
Scott Brozell
Re: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 14:02:56 PST)
Re: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 13:01:21 PST)
Re: AMBER: problems with running sander in parallel on linux
(Tue Feb 15 2005 - 11:42:45 PST)
Scott Pendley
AMBER: PDB conversion to gzmat using antechamber
(Tue Feb 15 2005 - 15:32:21 PST)
Soo
AMBER: GB solvation and "boxed" environment simulation
(Thu Feb 17 2005 - 21:32:38 PST)
AMBER: Is droplet boundary condition option possible ?
(Fri Feb 04 2005 - 22:18:36 PST)
Stefano Federico Massimiliano Pieraccini (Stefano.Pieraccini)
AMBER: GBSA calculation
(Mon Feb 28 2005 - 02:59:23 PST)
Re: AMBER: Cyclic peptide
(Wed Feb 16 2005 - 01:48:19 PST)
Stern, Julie
AMBER: setBox buffer in leap
(Fri Feb 25 2005 - 10:43:19 PST)
Re: AMBER: lastrst
(Wed Feb 23 2005 - 13:03:57 PST)
AMBER: lastrst
(Tue Feb 22 2005 - 17:21:00 PST)
AMBER: lastrst
(Tue Feb 22 2005 - 15:06:24 PST)
AMBER: vlimit exceeded and temperature blow up
(Tue Feb 22 2005 - 08:36:05 PST)
AMBER: molecule blowing apart during equilibration
(Thu Feb 17 2005 - 23:12:16 PST)
AMBER: leap saveamberparm chain types response
(Thu Feb 17 2005 - 15:16:50 PST)
AMBER: EWALD and belly not strictly correct
(Tue Feb 15 2005 - 21:41:49 PST)
AMBER: desc NEWRES and blank unit type
(Wed Feb 09 2005 - 18:07:00 PST)
AMBER: leap bond angle building
(Tue Feb 08 2005 - 15:44:39 PST)
AMBER: trajectory of minimization
(Fri Feb 04 2005 - 15:49:17 PST)
AMBER: huge bond distances in new residue
(Fri Feb 04 2005 - 15:48:14 PST)
AMBER: protonate and input conversion error
(Thu Feb 03 2005 - 08:48:20 PST)
AMBER: xleap MOVE and .lib file
(Wed Feb 02 2005 - 09:01:55 PST)
Stuart Murdock
AMBER: Topology Format Amber 8
(Tue Feb 15 2005 - 04:00:56 PST)
thanyarat Udom
AMBER: Why I couldnt used carnal for analyzed RMSD ?
(Wed Feb 16 2005 - 01:28:17 PST)
AMBER: How to converts a binary mdcrd file
(Fri Feb 11 2005 - 00:00:10 PST)
AMBER: How to converts a binary mdcrd file
(Thu Feb 10 2005 - 23:02:21 PST)
Thomas E. Cheatham, III
Re: AMBER: Restraint of atoms during minimization
(Tue Feb 22 2005 - 09:36:42 PST)
Re: AMBER: MPI for sander8
(Tue Feb 22 2005 - 09:22:18 PST)
Re: AMBER: problem with ptraj and randomizeions
(Thu Feb 17 2005 - 10:57:23 PST)
Re: AMBER: sander segmentation fault
(Wed Feb 02 2005 - 15:59:13 PST)
Re: AMBER: Problem in ptraj
(Wed Feb 02 2005 - 10:34:01 PST)
Thomas Steinbrecher
Re: AMBER: Dummy Atom Types on both states
(Tue Feb 15 2005 - 01:04:06 PST)
Troy Wymore
AMBER: PSC Summer Workshop: Modeling Proteins and Nucleic Acids with AMBER, VMD and the MMTSB Toolkit
(Thu Feb 17 2005 - 11:00:36 PST)
Tru Huynh
Re: AMBER: compile amber8 on RHEL4
(Fri Feb 25 2005 - 05:09:33 PST)
Viktor Hornak
Re: AMBER: MPI for sander8
(Tue Feb 22 2005 - 09:13:46 PST)
Re: AMBER: sander errors with atom restraints on ia64
(Thu Feb 17 2005 - 14:46:26 PST)
Vineet Pande
RE: AMBER: How to build dynamics input for guanine with tleap ?
(Thu Feb 24 2005 - 06:35:23 PST)
RE: AMBER: classes
(Thu Feb 24 2005 - 06:29:19 PST)
RE: AMBER: constrains
(Mon Feb 14 2005 - 07:48:39 PST)
RE: AMBER:how to analyse trajectory files
(Mon Feb 14 2005 - 03:07:21 PST)
RE: AMBER: stereo
(Wed Feb 09 2005 - 10:51:06 PST)
RE: AMBER: minimize a ptraj average pdb structure
(Wed Feb 09 2005 - 02:05:14 PST)
Vlad Cojocaru
AMBER: units describing projection onto modes
(Thu Feb 24 2005 - 10:40:18 PST)
AMBER: correlation along PCA modes
(Mon Feb 07 2005 - 03:35:44 PST)
AMBER: Carnal in Amber8
(Tue Feb 01 2005 - 08:11:09 PST)
Woojin Lee
AMBER: xleap: different distance results from "check" command in xleap
(Tue Feb 01 2005 - 21:54:14 PST)
Xiao He
AMBER: ico(i)=-1?
(Fri Feb 25 2005 - 19:49:46 PST)
Xiaowei (David) Li
AMBER: dppsv returns error code: 29
(Fri Feb 04 2005 - 09:58:56 PST)
xiaowen
Re: AMBER: tleap load pdb file
(Wed Feb 09 2005 - 10:51:44 PST)
RE: AMBER: tleap load pdb file
(Mon Feb 07 2005 - 19:52:36 PST)
RE: AMBER: tleap load pdb file
(Mon Feb 07 2005 - 12:58:39 PST)
Re: AMBER: tleap load pdb file
(Sat Feb 05 2005 - 09:20:12 PST)
AMBER: tleap load pdb file
(Fri Feb 04 2005 - 13:18:09 PST)
AMBER: tleap load pdb file
(Fri Feb 04 2005 - 07:44:17 PST)
AMBER: question about tleap load pdb file
(Wed Feb 02 2005 - 19:19:19 PST)
Xin Hu
AMBER: cross-correlation
(Thu Feb 24 2005 - 08:40:54 PST)
Xin Wang
Re: AMBER: sander segmentation fault
(Wed Feb 02 2005 - 13:36:25 PST)
AMBER: sander segmentation fault
(Tue Feb 01 2005 - 14:15:12 PST)
Ye MEI
Re: AMBER: compile amber8 on RHEL4
(Fri Feb 25 2005 - 04:01:17 PST)
Re: Re: AMBER: separate solvent-solvent and solvent-solute interaction
(Mon Feb 21 2005 - 19:21:48 PST)
AMBER: separate solvent-solvent and solvent-solute interaction
(Mon Feb 21 2005 - 04:44:22 PST)
AMBER: simulation with explicit water molecules
(Sat Feb 19 2005 - 19:24:48 PST)
yen li
Re: AMBER: problem with protein minimization
(Tue Feb 22 2005 - 01:26:37 PST)
AMBER: problem with protein minimization
(Mon Feb 21 2005 - 01:12:02 PST)
AMBER: (no subject)
(Sun Feb 20 2005 - 10:16:32 PST)
yipinl.umich.edu
Re: AMBER: Dummy Atom Types on both states
(Tue Feb 15 2005 - 07:31:56 PST)
YoungJin Cho
Re: AMBER: Antechamber/formatting question
(Mon Feb 21 2005 - 08:15:32 PST)
yuann
AMBER: make test.lmod error
(Fri Feb 25 2005 - 08:45:11 PST)
Last message date
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Tue Mar 01 2005 - 07:53:00 PST
Archived on
: Wed Dec 25 2024 - 05:53:26 PST
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