Re: AMBER: inconsistent ordering in an improper dihedral of TRP

From: Carlos Simmerling <>
Date: Fri, 11 Feb 2005 18:41:26 -0500

I can confirm that this happens when I try multiple TRP too. I don't
know why- I'll have to look at leap but maybe someone more familiar with
the leap torsion builder would be helpful too..

David A. Case wrote:

>On Sun, Feb 06, 2005, Sanghyun Park wrote:
>>The ordering of the improper dihedral CD1-CD2-CG-CB is inconsistent
>>when there are multiple TRP residues.
>Thanks for the report. I haven't had time to look into this yet, but I will
>not forget about it!
> regards..dave case
>p.s. the above "promise" should not inhibit others on the list from figuring
>out what is going here. Any help would be appreciated!
>The AMBER Mail Reflector
>To post, send mail to
>To unsubscribe, send "unsubscribe amber" to
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Fri Feb 11 2005 - 23:53:00 PST
Custom Search