From: S.Sundar Raman <>
Date: Mon, 14 Feb 2005 14:33:27 +0530

i am new user to amber. i don't know how to analyse the molecular
dynamics out put.i gave that file to ptraj.i could not able to
understnd what ptraj is can i see the variation in potential
energy with there any other trajectory viewing software is
there?please help me in this regrad.

S.Sundar Raman
Chemical Lab,
ph: 044-24411830
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Mon Feb 14 2005 - 09:53:01 PST
Custom Search