AMBER: DNA Tutorial

From: Dwayne Hoobler <>
Date: Fri, 18 Feb 2005 15:07:34 -0800 (PST)

I am following the instructions given in the DNA
tutorial using Amber 8 in linux. The problem I am
having is that the solvatebox command puts waters only
at the end of the DNA structure rather than all around
it. Also, the addions command only puts ions on the x
- axis in the .inpcrd file. How can one correct this?

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Received on Fri Feb 18 2005 - 23:53:00 PST
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