AMBER: Carnal in Amber8

From: Vlad Cojocaru <>
Date: Tue, 01 Feb 2005 17:11:09 +0100

Dear Amber users,
    Is there available a carnal version that is compatible with amber8?
I have troubles in reading trajectory files created with ptraj (from
amber8) in Carnal of Amber7. I am asking this because Carnal had some
very nice features like defining planes and calculating distances and
angles between planes. I had some scripts built for this purpose and I
was trying to use them on new trajectories but Carnal does not load
properly these new trajectories created with ptraj after processing.
    I would be grateful if somebody can give me an advice on this? Could
ptraj do the same things as Carnal?
Thanks a lot

Vlad Cojocaru 
Max Planck Institute for Biophysical Chemistry 
Department: 060 
Am Fassberg 11, 37077 Goettingen, Germany 
tel: ++49-551-201.1327 
home tel: ++49-551-9963204  
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Tue Feb 01 2005 - 16:53:00 PST
Custom Search