RE: AMBER: Linux Enterprise

From: Ross Walker <ross.rosswalker.co.uk>
Date: Tue, 8 Feb 2005 11:59:43 -0800

You need to make sure you source the intel compiler setup files when you
logon.
 
E.g. if you use csh you need to add the following to your .cshrc file:
 
source /opt/intel_cc_80/bin/iccvars.csh
source /opt/intel_fc_80/bin/ifortvars.csh
 
This is described in detail in the manual for the Intel compilers and
should, if this a centrally managed machine, have been implemented by your
sys admin.
 
Alternatively you can compile amber8 as static by specifying the following
for the configure script:
 
../configure -p4 -static ifort
 
Then rebuild amber.
 
That way the executables won't need to go looking for shared libraries.
 
All the best
Ross
 

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  _____

From: owner-amber.scripps.edu [mailto:owner-amber.scripps.edu] On Behalf Of
Beale, John
Sent: 08 February 2005 11:40
To: amber.scripps.edu
Subject: AMBER: Linux Enterprise


I am trying to run AMBER 8.0 on the Redhat Linux Enterprise platform. When I
try to run sander I get the following message:
 
sander: error while loading shared libraries: libcxa.so.5: cannot open
shared object file: No such file or directory
 
AMBER 7.0 works just fine on the system.
 
Am I missing a file? How can I work through this?
 
JMB
 



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Received on Tue Feb 08 2005 - 20:53:01 PST
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