AMBER: AMBER 8 : Water cap problem

From: Guillaume Bollot <>
Date: Mon, 14 Feb 2005 14:14:20 +0100

Dear all users,
I have a problem in molecular dynamic simulation on a protein and water cap.
My problem is that one or two water molecules had extended beyond the
extent of the virtual box (Error message).
I restarted(IREST=1, NTX=5) my dynamic but the problem is the same.
Are there some solutions at this problem?
Thanks in advance.

BOLLOT Guillaume
Organic Chemistry Department
University of Geneva
30, quai Ernest-Ansermet
CH-1211 Geneva 4
tel. +41-22 379 6155

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Received on Mon Feb 14 2005 - 13:53:01 PST
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