Amber Archive Jul 2003: by author

A. Hungie
- AMBER: Re: methylphosphonate (Tue Jul 15 2003 - 01:31:52 PDT)
- methylphosphonate (Mon Jul 14 2003 - 06:20:52 PDT)
Aki Hoji
- AMBER: Running Amber on MacOSX(XDarwin) (Thu Jul 31 2003 - 07:10:16 PDT)
- AMBER: (Wed Jul 30 2003 - 14:19:02 PDT)
Andreas Svrcek-Seiler
- Re: AMBER: please let me know if this is correct (Mon Jul 28 2003 - 09:07:28 PDT)
- Re: AMBER: AMBER and NAMD (Sun Jul 27 2003 - 09:10:10 PDT)
Andrei Leitão
- Temperature control (Wed Jul 09 2003 - 13:25:12 PDT)
Angela Pantelogianis
- Re: AMBER: Fwd: Minimizing after solvation (Mon Jul 21 2003 - 08:26:30 PDT)
- Re: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 07:59:24 PDT)
- AMBER: Fwd: Minimizing after solvation (Fri Jul 18 2003 - 15:34:30 PDT)
Anton B. Guliaev
- AMBER: Coordinate resetting (SHAKE) cannot be accomplished (Tue Jul 15 2003 - 14:35:59 PDT)
Bill Ross
- Re: AMBER: Coordinate resetting (SHAKE) cannot be accomplished (Wed Jul 16 2003 - 12:46:44 PDT)
- Re: carnal in big systems (Tue Jul 08 2003 - 12:22:09 PDT)
- Re: Distribution Min with truncated octahedron box (Tue Jul 08 2003 - 11:24:09 PDT)
caldwell.heimdal.compchem.ucsf.edu
- big changes coming (Mon Jul 14 2003 - 08:27:11 PDT)
- RE: Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 14:44:53 PDT)
Carlos P. Sosa
- Re: parallelisation (Mon Jul 14 2003 - 09:19:00 PDT)
Carlos Simmerling
- Re: AMBER: PMF calculation (Mon Jul 28 2003 - 08:09:45 PDT)
- Re: AMBER: Dynamics and Simulated Annealing (Fri Jul 25 2003 - 09:53:38 PDT)
- Re: AMBER: TEMP is not reaching 300K (Thu Jul 24 2003 - 10:35:03 PDT)
- Re: AMBER: water box problem (Thu Jul 24 2003 - 04:36:29 PDT)
- Re: AMBER question (Fri Jul 11 2003 - 08:24:30 PDT)
- Re: Temperature control (Wed Jul 09 2003 - 14:15:29 PDT)
- Re: Temperature control (Wed Jul 09 2003 - 13:38:26 PDT)
- Re: Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 17:50:14 PDT)
- Re: parallelisation (Mon Jul 07 2003 - 06:38:32 PDT)
- Re: How to do a rigid solvent model? (Sat Jul 05 2003 - 13:06:39 PDT)
- Re: How to do a rigid solvent model? (Fri Jul 04 2003 - 10:25:21 PDT)
Chen, Ya
- AMBER: Odd Problem with PMEMD (Mon Jul 21 2003 - 20:35:23 PDT)
Darren Davies
- Re: AMBER Cutoff (Tue Jul 01 2003 - 03:45:05 PDT)
David
- AMBER question (Fri Jul 11 2003 - 06:42:12 PDT)
- AMBER question (Wed Jul 09 2003 - 23:51:31 PDT)
- van der Waals term (Wed Jul 09 2003 - 23:47:34 PDT)
David A. Case
- Re: AMBER: compile problem (Wed Jul 30 2003 - 14:56:58 PDT)
- Re: AMBER: Ewald problem (Wed Jul 30 2003 - 10:01:49 PDT)
- Re: AMBER: chemical potential (Wed Jul 30 2003 - 09:31:34 PDT)
- Re: AMBER: Ewald_Bomb (Wed Jul 30 2003 - 09:30:13 PDT)
- Re: AMBER: dynamics of isolated system (Tue Jul 29 2003 - 17:35:03 PDT)
- Re: AMBER: combine prep files (Tue Jul 29 2003 - 17:27:57 PDT)
- Re: AMBER: chemical potential (Tue Jul 29 2003 - 07:50:23 PDT)
- Re: AMBER: Question about quasih analysis (Mon Jul 28 2003 - 14:40:48 PDT)
- Re: AMBER: Question about quasih analysis (Mon Jul 28 2003 - 11:37:20 PDT)
- Re: AMBER: strange problem with a small system (Mon Jul 28 2003 - 10:12:30 PDT)
- Re: AMBER: please let me know if this is correct (Mon Jul 28 2003 - 09:55:28 PDT)
- Re: AMBER: Question about quasih analysis (Mon Jul 28 2003 - 09:16:13 PDT)
- AMBER: a note on problems with MPI and sander (Sat Jul 26 2003 - 11:50:37 PDT)
- Re: AMBER: strange problem with a small system (Thu Jul 24 2003 - 21:51:04 PDT)
- Re: AMBER: /exe/teLeap does not exist (Thu Jul 24 2003 - 17:50:17 PDT)
- Re: AMBER: strange problem with a small system (Wed Jul 23 2003 - 11:51:59 PDT)
- Re: AMBER: Non-standard Residue (Wed Jul 23 2003 - 11:31:44 PDT)
- Re: AMBER: FILE UNITIO.C (Wed Jul 23 2003 - 08:04:54 PDT)
- Re: AMBER: HB dynamics in water and Ion solvation free energies (Tue Jul 22 2003 - 19:18:51 PDT)
- Re: AMBER: Non-standard Residue (Tue Jul 22 2003 - 14:06:50 PDT)
- Re: AMBER: FILE UNITIO.C (Tue Jul 22 2003 - 11:54:14 PDT)
- Re: AMBER: (no subject) (Tue Jul 22 2003 - 09:30:00 PDT)
- Re: AMBER: dielectric in sander (Mon Jul 21 2003 - 08:52:57 PDT)
- Re: AMBER: Fwd: Minimizing after solvation (Mon Jul 21 2003 - 08:50:35 PDT)
- Re: AMBER: Fwd: Minimizing after solvation (Sat Jul 19 2003 - 21:34:53 PDT)
- Re: AMBER: neutral N- and C- termini ! (Thu Jul 17 2003 - 09:05:00 PDT)
- Re: AMBER: RADII in DELPHI (Thu Jul 17 2003 - 09:03:29 PDT)
- Re: AMBER: Big system in Gibbs (Thu Jul 17 2003 - 09:00:57 PDT)
- Re: AMBER: curves nomenclature (Wed Jul 16 2003 - 15:29:01 PDT)
- Re: AMBER: Coordinate resetting (SHAKE) cannot be accomplished (Tue Jul 15 2003 - 18:25:26 PDT)
- AMBER: Re: methylphosphonate (Mon Jul 14 2003 - 17:22:28 PDT)
- Re: Sander_classic output: NAN (Mon Jul 14 2003 - 15:27:17 PDT)
- Re: parallelisation (Mon Jul 14 2003 - 15:24:34 PDT)
- mail reflector address is changing (Mon Jul 14 2003 - 14:56:21 PDT)
- Re: effect of forcing neutrality (Mon Jul 14 2003 - 08:49:57 PDT)
- Re: May I get your help? (Thu Jul 10 2003 - 20:05:21 PDT)
- Re: memory problem (Thu Jul 10 2003 - 20:03:14 PDT)
- Re: your mail (Thu Jul 10 2003 - 20:01:51 PDT)
- Re: Adding missing parameters (Thu Jul 10 2003 - 19:58:21 PDT)
- Re: npscal (Wed Jul 09 2003 - 13:53:54 PDT)
- Re: Temperature control (Wed Jul 09 2003 - 13:53:10 PDT)
- Re: memory shortage with mm_pbsa (Tue Jul 08 2003 - 18:47:55 PDT)
- Re: constraint + restraint (Tue Jul 08 2003 - 10:33:35 PDT)
- Re: Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 15:04:01 PDT)
- Re: Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 14:23:48 PDT)
- correction to location of the PMEMD program (Mon Jul 07 2003 - 14:17:44 PDT)
- New program available: PMEMD (Particle Mesh Ewald Molecular Dynamics) (Mon Jul 07 2003 - 14:13:33 PDT)
- Re: Machine file available for ICC compiler ? (Fri Jul 04 2003 - 12:14:00 PDT)
- Re: How to do a rigid solvent model? (Fri Jul 04 2003 - 10:16:51 PDT)
- Re: sander,ntt=5 (Fri Jul 04 2003 - 10:13:21 PDT)
- Re: Antechamber (Thu Jul 03 2003 - 10:36:47 PDT)
- Re: Antechamber (Thu Jul 03 2003 - 09:59:12 PDT)
- Re: input problem (Tue Jul 01 2003 - 12:24:42 PDT)
- Re: parallel version amber installation problem (Tue Jul 01 2003 - 10:43:03 PDT)
- Re: Questions about output archive and micromolecules (Tue Jul 01 2003 - 10:39:33 PDT)
- Re: protonate (Tue Jul 01 2003 - 10:29:54 PDT)
- Re: AMBER Cutoff (Tue Jul 01 2003 - 08:00:00 PDT)
David Smith
- Re: AMBER: PMF (Wed Jul 16 2003 - 02:37:56 PDT)
Dr. Yong Duan
- Re: AMBER: dynamics of isolated system (Tue Jul 29 2003 - 13:16:35 PDT)
- Re: AMBER: dynamics of isolated system (Tue Jul 29 2003 - 12:04:42 PDT)
- Re: AMBER: Fwd: Minimizing after solvation (Mon Jul 21 2003 - 08:48:00 PDT)
dvira
- ntx in sander (Sat Jul 12 2003 - 06:00:57 PDT)
ENikitina
- AMBER: (no subject) (Tue Jul 22 2003 - 08:53:56 PDT)
- Re: AMBER: Big system in Gibbs (Tue Jul 22 2003 - 08:40:07 PDT)
- AMBER: Big system in Gibbs (Wed Jul 16 2003 - 23:01:23 PDT)
- Ar as a solvent (Wed Jul 09 2003 - 04:42:47 PDT)
Florian Barth
- Amber7 on Opteron (Thu Jul 10 2003 - 03:46:32 PDT)
FyD
- Comparative MD (Fri Jul 11 2003 - 06:29:02 PDT)
gold gunaseelan
- AMBER: parallelisation (Thu Jul 31 2003 - 05:42:32 PDT)
- AMBER: parallelisation (Thu Jul 31 2003 - 05:42:25 PDT)
- parallelisation (Mon Jul 14 2003 - 08:48:56 PDT)
- parallelisation (Fri Jul 11 2003 - 08:06:43 PDT)
- parallelisation (Mon Jul 07 2003 - 06:32:00 PDT)
Guanglei Cui
- Re: delphi with amber 7 (Fri Jul 11 2003 - 13:44:09 PDT)
GUILLERMINA L ESTIU
- Re: AMBER: strange problem with a small system (Mon Jul 28 2003 - 09:00:55 PDT)
- Re: AMBER: strange problem with a small system (Wed Jul 23 2003 - 12:13:47 PDT)
- AMBER: addition to: problem with a small system (Wed Jul 23 2003 - 11:36:03 PDT)
- AMBER: strange problem with a small system (Wed Jul 23 2003 - 10:22:34 PDT)
- carnal in big systems (Tue Jul 08 2003 - 11:44:21 PDT)
Gus Carri
- Lennard-Jones A and B coefficients (Tue Jul 08 2003 - 15:53:56 PDT)
- Nmanal (Wed Jul 02 2003 - 14:26:50 PDT)
- Nmode doesn't work ? (Tue Jul 01 2003 - 14:09:11 PDT)
Haizhen Zhong
- Re: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 11:08:39 PDT)
- RE: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 09:25:38 PDT)
- AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 07:16:40 PDT)
- Re: AMBER: Questions about mm_pbsa and alanine scanning (Wed Jul 16 2003 - 06:04:30 PDT)
- Re: AMBER: Questions about mm_pbsa and alanine scanning (Tue Jul 15 2003 - 14:01:47 PDT)
- AMBER: Questions about mm_pbsa and alanine scanning (Tue Jul 15 2003 - 13:34:32 PDT)
Herbert Georg
- Re: AMBER: dynamics of isolated system (Tue Jul 29 2003 - 12:27:15 PDT)
- Re: AMBER: dynamics of isolated system (Tue Jul 29 2003 - 12:05:45 PDT)
- AMBER: dynamics of isolated system (Tue Jul 29 2003 - 11:19:18 PDT)
- input problem (Tue Jul 01 2003 - 12:12:23 PDT)
Holger Gohlke
- Re: AMBER: monitor vdw along time (Fri Jul 25 2003 - 11:56:28 PDT)
- Re: AMBER: (no subject) (Thu Jul 24 2003 - 08:38:15 PDT)
ian r gould
- Opteron Experience (Thu Jul 10 2003 - 06:29:38 PDT)
Ioana Cozmuta
- AMBER: chage WATBOX216 (Thu Jul 31 2003 - 14:10:44 PDT)
- AMBER: question about ptraj (Wed Jul 30 2003 - 15:07:21 PDT)
- AMBER: HB dynamics in water and Ion solvation free energies (Tue Jul 22 2003 - 15:09:41 PDT)
- AMBER: question on LJ parameters for molecules (Mon Jul 14 2003 - 17:38:58 PDT)
- diffusion in ptraj (Mon Jul 07 2003 - 14:56:56 PDT)
- ptraj (Mon Jul 07 2003 - 12:06:13 PDT)
Jiri Sponer
- Re: Valdiation of Latest Amber parameters (Wed Jul 09 2003 - 10:03:53 PDT)
Joffre Heredia
- Re: memory shortage with mm_pbsa - some more thoughts (Sat Jul 12 2003 - 03:26:39 PDT)
Johannes Zuegg
- Re: AMBER: Odd Problem with PMEMD (Mon Jul 21 2003 - 21:12:37 PDT)
Junmei Wang
- Re: AMBER: (no subject) (Wed Jul 30 2003 - 12:34:54 PDT)
Lifang Xu
- (no subject) (Tue Jul 01 2003 - 07:22:43 PDT)
Ling Zhang
- AMBER: monitor vdw along time (Fri Jul 25 2003 - 10:48:26 PDT)
- Re: Distribution Min with truncated octahedron box (Tue Jul 08 2003 - 11:31:42 PDT)
- Distribution Min with truncated octahedron box (Tue Jul 08 2003 - 10:24:47 PDT)
Lishan Yao
- AMBER: frequency analysis (Wed Jul 30 2003 - 14:43:16 PDT)
- Re: AMBER: Question about quasih analysis (Mon Jul 28 2003 - 13:24:19 PDT)
- Re: AMBER: Question about quasih analysis (Mon Jul 28 2003 - 10:30:26 PDT)
- AMBER: Question about quasih analysis (Mon Jul 28 2003 - 07:04:26 PDT)
- AMBER: PMF calculation (Thu Jul 24 2003 - 12:25:48 PDT)
- AMBER: question about ptraj? (Thu Jul 24 2003 - 09:18:20 PDT)
- AMBER: question about quasih? (Fri Jul 18 2003 - 15:15:32 PDT)
Mail Delivery Subsystem
- Returned mail: see transcript for details (Sun Jul 20 2003 - 12:22:37 PDT)
- Returned mail: see transcript for details (Mon Jul 21 2003 - 03:31:44 PDT)
Majordomo.scripps.edu
- Welcome to amber (Mon Jul 14 2003 - 15:12:03 PDT)
Marco Aurelio Correia Preto
- RE: AMBER question (Fri Jul 11 2003 - 07:29:11 PDT)
- RE: AMBER question (Thu Jul 10 2003 - 01:04:08 PDT)
- RE: How to do a rigid solvent model? (Mon Jul 07 2003 - 01:25:27 PDT)
- How to do a rigid solvent model? (Fri Jul 04 2003 - 07:30:00 PDT)
Martin Lepsik
- ALAscan of Proline (Mon Jul 07 2003 - 14:14:09 PDT)
Mi-Kyung Seo
- AMBER: (no subject) (Wed Jul 30 2003 - 12:00:49 PDT)
- AMBER: combine prep files (Tue Jul 29 2003 - 14:14:52 PDT)
Michele Lunelli
- Re: AMBER: TEMP is not reaching 300K (Fri Jul 25 2003 - 08:27:09 PDT)
- AMBER: dielectric in sander (Mon Jul 21 2003 - 08:36:19 PDT)
Mizuguchi Mineyuki
- AMBER: /exe/teLeap does not exist (Thu Jul 24 2003 - 00:23:55 PDT)
Monika Fuxreiter
- sander,ntt=5 (Fri Jul 04 2003 - 04:17:33 PDT)
Narang Manpreet Kaur
- AMBER: Dynamics and Simulated Annealing (Fri Jul 25 2003 - 06:03:52 PDT)
- Re: AMBER: (no subject) (Thu Jul 24 2003 - 21:36:54 PDT)
- AMBER: (no subject) (Thu Jul 24 2003 - 04:57:36 PDT)
Natasja Brooijmans
- Re: AMBER: Questions about mm_pbsa and alanine scanning (Tue Jul 15 2003 - 13:42:40 PDT)
Nori
- Re: delphi with amber 7 (Fri Jul 11 2003 - 19:15:30 PDT)
Noriaki Okimoto
- delphi with amber 7 (Fri Jul 11 2003 - 11:34:34 PDT)
Obdulia Rabal
- RE: AMBER: FILE UNITIO.C (Wed Jul 23 2003 - 00:51:22 PDT)
- AMBER: FILE UNITIO.C (Tue Jul 22 2003 - 11:15:48 PDT)
- AMBER: RADII in DELPHI (Thu Jul 17 2003 - 01:58:57 PDT)
Omar Wahab
- AMBER: water box problem (Thu Jul 24 2003 - 01:32:35 PDT)
pantelo.okstate.edu
- Sander_classic output: NAN (Mon Jul 14 2003 - 09:07:19 PDT)
Peter Anderson
- Strange F.E.P. behavior (Sun Jul 13 2003 - 06:15:49 PDT)
- Adding missing parameters (Wed Jul 09 2003 - 11:18:33 PDT)
- memory shortage with mm_pbsa (Tue Jul 08 2003 - 17:36:09 PDT)
- vlimit exceeded (Sat Jul 05 2003 - 09:39:01 PDT)
Petrodler.aol.com
- Re: AMBER: chemical potential (Wed Jul 30 2003 - 00:50:05 PDT)
- AMBER: chemical potential (Mon Jul 28 2003 - 23:28:57 PDT)
Piotr Cieplak
- Re: AMBER: frequency analysis (Wed Jul 30 2003 - 14:49:08 PDT)
- Re: AMBER: Re: methylphosphonate (Mon Jul 14 2003 - 22:01:59 PDT)
- Re: AMBER: Re: methylphosphonate (Mon Jul 14 2003 - 17:43:14 PDT)
ptolonen.cc.joensuu.fi
- 3 simultaneous simulations in one computer (Thu Jul 10 2003 - 04:20:15 PDT)
Qing Zhang
- AMBER: Re: memory shortage with mm_pbsa - some more thoughts (Mon Jul 14 2003 - 16:10:26 PDT)
quch quch
- resp for charged molecule? (Thu Jul 10 2003 - 14:09:08 PDT)
Raja Swaminathan
- parallel version amber installation problem (Tue Jul 01 2003 - 04:12:41 PDT)
- parallel version amber installation problem (Tue Jul 01 2003 - 04:09:43 PDT)
Ran Ye
- Re: AMBER: add (Thu Jul 31 2003 - 15:03:43 PDT)
- AMBER: add (Thu Jul 31 2003 - 13:08:30 PDT)
- Re: AMBER: Non-standard Residue (Wed Jul 23 2003 - 09:08:03 PDT)
- AMBER: Non-standard Residue (Tue Jul 22 2003 - 12:34:06 PDT)
Richard Dayton Smith
- (no subject) (Wed Jul 09 2003 - 10:23:38 PDT)
rluo.uci.edu
- Re: AMBER: question about ptraj? (Thu Jul 24 2003 - 09:48:54 PDT)
Robert Duke
- Re: AMBER: Odd Problem with PMEMD (Tue Jul 22 2003 - 04:17:25 PDT)
- Re: AMBER: PMEMD and sander from AMBER6 performances (Wed Jul 16 2003 - 20:11:55 PDT)
Ross Walker
- RE: 3 simultaneous simulations in one computer (Thu Jul 10 2003 - 05:01:57 PDT)
- RE: Amber7 on Opteron (Thu Jul 10 2003 - 04:58:08 PDT)
Scott Brozell
- Re: AMBER: add (Thu Jul 31 2003 - 16:45:54 PDT)
- Re: AMBER: add (Thu Jul 31 2003 - 14:51:46 PDT)
- Re: AMBER: compile problem (Wed Jul 30 2003 - 14:58:55 PDT)
sd233.georgetown.edu
- AMBER: DYNAMICS RUN (Fri Jul 25 2003 - 10:47:44 PDT)
- AMBER: TEMP is not reaching 300K (Thu Jul 24 2003 - 10:06:49 PDT)
Shuang Ding
- AMBER: compile problem (Wed Jul 30 2003 - 13:59:08 PDT)
- Re: AMBER: Ewald problem (Wed Jul 30 2003 - 10:28:31 PDT)
- AMBER: Ewald problem (Wed Jul 30 2003 - 09:08:55 PDT)
- npscal (Wed Jul 09 2003 - 13:12:04 PDT)
Shweta Sikri
- Re: Antechamber (Thu Jul 03 2003 - 10:18:58 PDT)
- Antechamber (Thu Jul 03 2003 - 09:29:03 PDT)
Sia Meshkat
- RE: Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 18:40:52 PDT)
- RE: Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 15:19:04 PDT)
- RE: Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 14:48:41 PDT)
- Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 09:35:57 PDT)
Sue Heavner
- AMBER: curves nomenclature (Wed Jul 16 2003 - 12:34:13 PDT)
Sukjoon Yoon
- Bad atom type: f (Mon Jul 14 2003 - 08:28:58 PDT)
Susanna Monti
- AMBER: Ewald_Bomb (Wed Jul 30 2003 - 06:37:40 PDT)
Suse Broyde
- Re: AMBER: monitor vdw along time (Fri Jul 25 2003 - 12:57:06 PDT)
Taisung Lee
- AMBER: Taisung Lee/San Diego/Accelrys is out of the office. (Fri Jul 25 2003 - 10:02:29 PDT)
takanori.kanazawa.pharma.novartis.com
- AMBER: MOPAC509mn test jobs on linux (Thu Jul 24 2003 - 16:54:39 PDT)
tang kwa
- constraint + restraint (Tue Jul 08 2003 - 00:05:11 PDT)
Teletchéa Stéphane
- Re: AMBER: Dynamics and Simulated Annealing (Fri Jul 25 2003 - 09:57:53 PDT)
- Re: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 09:35:46 PDT)
- AMBER: PMEMD and sander from AMBER6 performances (Wed Jul 16 2003 - 16:37:34 PDT)
- Machine file available for ICC compiler ? (Fri Jul 04 2003 - 10:08:30 PDT)
Thomas Cheatham
- Re: Comparative MD (Fri Jul 11 2003 - 12:32:35 PDT)
- Re: your mail (IBM runtime problem) (Tue Jul 01 2003 - 09:58:00 PDT)
Thomas E. Cheatham, III
- Re: AMBER: question about ptraj (Wed Jul 30 2003 - 15:38:52 PDT)
- Re: AMBER: question about ptraj? (Thu Jul 24 2003 - 09:40:50 PDT)
- Re: AMBER: (no subject) (Thu Jul 24 2003 - 09:32:28 PDT)
- Re: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 11:18:50 PDT)
- Re: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 09:40:29 PDT)
- Re: AMBER: question about quasih? (Fri Jul 18 2003 - 15:39:15 PDT)
- AMBER: Re: methylphosphonate (Mon Jul 14 2003 - 19:46:06 PDT)
Thomas Steinbrecher
- Nmode recompilation (Tue Jul 01 2003 - 01:41:33 PDT)
Tru Huynh
- g77 on 32 bits cpu (was Re: Nmode recompilation) (Tue Jul 01 2003 - 02:48:15 PDT)
Vlad Cojocaru
- Re: AMBER: dynamics of isolated system (Tue Jul 29 2003 - 11:50:52 PDT)
- AMBER: H-O-H angle in TIP3P water model during minimization (Mon Jul 28 2003 - 17:42:10 PDT)
- AMBER: ambpdb and residue number (Mon Jul 28 2003 - 12:47:26 PDT)
- AMBER: please let me know if this is correct (Mon Jul 28 2003 - 06:58:55 PDT)
- AMBER: Impropers from Amber parm files to NAMD (Sun Jul 27 2003 - 10:56:47 PDT)
- Re: AMBER: AMBER and NAMD (Sun Jul 27 2003 - 10:45:40 PDT)
- AMBER: AMBER and NAMD (Sun Jul 27 2003 - 06:57:24 PDT)
- AMBER: running AMBER on an IBM P690 cluster (Thu Jul 24 2003 - 10:46:30 PDT)
- Re: AMBER: TEMP is not reaching 300K (Thu Jul 24 2003 - 10:35:21 PDT)
- Re: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 08:16:22 PDT)
- nab compilation (Thu Jul 10 2003 - 05:02:04 PDT)
Wu Yingliang
- Refining a docked protein complex (Wed Jul 09 2003 - 06:59:26 PDT)
- May I get your help? (Wed Jul 09 2003 - 05:39:05 PDT)
X. Tan
- AMBER: PMF (Tue Jul 15 2003 - 10:02:47 PDT)
- PMF (Wed Jul 02 2003 - 12:02:53 PDT)
Xavier Periole
- AMBER: N/C termini (Wed Jul 16 2003 - 15:24:19 PDT)
- AMBER: neutral N- and C- termini ! (Wed Jul 16 2003 - 11:52:29 PDT)
Yong Duan
- RE: AMBER: frequency analysis (Wed Jul 30 2003 - 16:04:00 PDT)
- RE: AMBER: H-O-H angle in TIP3P water model during minimization (Mon Jul 28 2003 - 17:54:28 PDT)
- RE: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 11:51:30 PDT)
- RE: AMBER: variable not in namelist for Sander input (Mon Jul 21 2003 - 07:49:07 PDT)
- RE: AMBER: question on LJ parameters for molecules (Mon Jul 14 2003 - 20:52:27 PDT)
- RE: Valdiation of Latest Amber parameters (Wed Jul 09 2003 - 22:25:33 PDT)
- RE: Valdiation of Latest Amber parameters (Tue Jul 08 2003 - 20:12:27 PDT)
- RE: Valdiation of Latest Amber parameters (Mon Jul 07 2003 - 16:28:41 PDT)
- RE: How to do a rigid solvent model? (Sun Jul 06 2003 - 12:59:23 PDT)
- RE: How to do a rigid solvent model? (Sat Jul 05 2003 - 11:48:01 PDT)
zhaoxc.puccini.che.pitt.edu
- Re: effect of forcing neutrality (Mon Jul 14 2003 - 09:17:24 PDT)
- effect of forcing neutrality (Thu Jul 10 2003 - 12:56:00 PDT)
- memory problem (Wed Jul 09 2003 - 06:34:09 PDT)
Zhi Qiang ZHOU
- about the read error (Tue Jul 01 2003 - 19:35:41 PDT)
Zhijun Li
- RE: May I get your help? (Fri Jul 11 2003 - 08:22:30 PDT)

Amber Archive Jul 2003 by author