AMBER: variable not in namelist for Sander input

From: Haizhen Zhong <>
Date: Mon, 21 Jul 2003 10:16:40 -0400 (EDT)

Hi there, I'm setting up a .in file for running sander with PME for an
octahedral water box for a sodium-neutralized Zinc containing protein
system. The input file is as follow,

and the error message in log file is like this,
 "namelist read: variable not in namelist
apparent state: unit 5 named
last format: list io
lately reading sequential formatted external IO
Abort (core dumped)
/users/zhongh:Permission denied. "

Can anyone tell me what's wrong in the input file. I've checked it several
times and I can not find where the errors are. By the way, can anyone give
me some references on using PME for an octahedral system for
metalloprotein (like zinc-containing protein)?

Thank you very much!


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Received on Mon Jul 21 2003 - 15:53:00 PDT
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