Dear AMBER users,
I am trying to simulate the unfolding of an RNA duplex in explicit solvent. I want to keep the amount of waters in the system to a minimum. I want to make a box with dimensions of approximately 40Ax40Ax100A with the solute positioned close to one end of the box rather than the centre of the box which Xleap produces. Is ther any way to position the solute at one end of the box as opposed to the centre?
Thanks,
Omar Wahab
Omar Wahab
PhD Student=20
Computational Modelling and Informatics Group
School of Pharmaceutical Sciences
University of Nottingham
Nottingham NG7 2RD
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Received on Thu Jul 24 2003 - 09:53:00 PDT
