Amber Archive Dec 2003: by author

a b
- AMBER: Basic potential question: (Wed Dec 24 2003 - 01:29:56 PST)
A. Hungie
- AMBER: How to use quasih? (Thu Dec 11 2003 - 08:12:23 PST)
- AMBER: Vibration frequency of nucleobases (Fri Dec 19 2003 - 09:48:03 PST)
- AMBER: how to calculate vibration frequency? (Wed Dec 03 2003 - 06:46:26 PST)
aini.UMDNJ.EDU
- AMBER: question about namelist (Mon Dec 15 2003 - 07:42:04 PST)
Aldo Jongejan
- RE: RE: AMBER: PMEMD Performance on Beowulf systems (Sun Dec 21 2003 - 23:27:41 PST)
arubin.unmc.edu
- AMBER: Nitrated Tyr (Wed Dec 10 2003 - 08:36:45 PST)
- AMBER: NO2-TYR (Thu Dec 04 2003 - 09:30:24 PST)
astrid.maass
- AMBER: special gaff atom types available? (Fri Dec 19 2003 - 03:58:30 PST)
- AMBER: gaff atom types for phosphor compouds (Tue Dec 09 2003 - 05:51:33 PST)
Beale, John
- AMBER: MOPAC from antechamber (Wed Dec 10 2003 - 09:46:02 PST)
Ben Cossins
- AMBER: Ewald in Amber 7 (Fri Dec 19 2003 - 07:49:11 PST)
- AMBER: Ibelly and Ewald error message when ewald should be off (Tue Dec 16 2003 - 15:01:52 PST)
Bette Pagan
- 2 FREE Worldwide Airline Tickets Worth $1600 for just $189! (Mon Dec 22 2003 - 19:05:04 PST)
Bill Ross
- Re: AMBER: roar topology and coordinate files (Mon Dec 29 2003 - 16:14:53 PST)
- Re: AMBER: The lost velocities in the restart file generated by Ptraj (Mon Dec 29 2003 - 16:11:54 PST)
- Re: AMBER: Constant temperature (Sat Dec 27 2003 - 09:14:00 PST)
- Re: AMBER: using sander without SHAKE (Wed Dec 24 2003 - 11:03:43 PST)
- Re: AMBER: vlimit? (Sun Dec 21 2003 - 20:04:40 PST)
- Re: AMBER: minimization on sander (Mon Dec 15 2003 - 12:32:39 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 11:26:29 PST)
- Re: AMBER: a simple question about HBond energy... (Fri Dec 12 2003 - 14:16:42 PST)
- Re: AMBER: adding extra salt (Fri Dec 12 2003 - 08:44:07 PST)
- RE: AMBER: xleap-N/C terminus (Thu Dec 11 2003 - 10:33:09 PST)
- Re: AMBER: Antechamber & Ptraj/Rdparm (Wed Dec 10 2003 - 10:17:37 PST)
- Re: AMBER: xleap-N/C terminus (Wed Dec 10 2003 - 10:14:06 PST)
- Re: AMBER: Mg2+ parameters for RNA usage (Wed Dec 10 2003 - 10:07:49 PST)
Bimo Ario Tejo
- AMBER: non-zero 10-12 coefficient (Sat Dec 13 2003 - 06:44:49 PST)
- AMBER: Carbohydrate connectivity (Thu Dec 11 2003 - 07:14:05 PST)
Carlos Simmerling
- Re: AMBER: PMEMD Performance on Beowulf systems (Mon Dec 22 2003 - 09:06:39 PST)
- Re: AMBER: PMEMD Performance on Beowulf systems (Mon Dec 22 2003 - 08:12:37 PST)
- Re: AMBER: PMEMD Performance on Beowulf systems (Fri Dec 19 2003 - 06:53:12 PST)
- Re: AMBER: initial structures (Mon Dec 08 2003 - 07:51:04 PST)
- Re: AMBER: sander output (Mon Dec 01 2003 - 18:37:06 PST)
ch cureton
- Re: AMBER: ambpdb (Fri Dec 12 2003 - 03:53:17 PST)
- Re: AMBER: ambpdb (Fri Dec 12 2003 - 02:47:06 PST)
Chris Moth
- RE: AMBER: Amber - compiler help (Thu Dec 04 2003 - 14:45:10 PST)
Dalmaris, John
- RE: AMBER: xleap-N/C terminus (Thu Dec 11 2003 - 10:01:35 PST)
Dave S Walker
- Re: AMBER: sander output (Thu Dec 04 2003 - 16:41:05 PST)
- AMBER: sander output (Mon Dec 01 2003 - 18:04:31 PST)
David A. Case
- Re: AMBER: Antechamber & Ptraj/Rdparm (Wed Dec 31 2003 - 07:47:46 PST)
- Re: AMBER: problems with pressure control (Tue Dec 30 2003 - 10:03:06 PST)
- Re: AMBER: Constant temperature (Sat Dec 27 2003 - 22:46:46 PST)
- Re: AMBER: vlimit? (Fri Dec 26 2003 - 10:18:16 PST)
- Re: AMBER: MSE (Wed Dec 24 2003 - 10:08:59 PST)
- Re: AMBER: using sander without SHAKE (Wed Dec 24 2003 - 10:06:40 PST)
- Re: AMBER: GIBBS - PMF question: How to get <dV/d_lam> during TI calculations? (Tue Dec 23 2003 - 11:18:39 PST)
- Re: AMBER: MSMS (Tue Dec 23 2003 - 10:56:32 PST)
- Re: AMBER: umbrella sampling with AMBER (Mon Dec 22 2003 - 17:48:30 PST)
- Re: AMBER: vlimit? (Mon Dec 22 2003 - 09:24:18 PST)
- Re: AMBER: using sander without SHAKE (Mon Dec 22 2003 - 09:22:09 PST)
- Re: AMBER: special gaff atom types available? (Sat Dec 20 2003 - 08:25:14 PST)
- Re: AMBER: Ewald in Amber 7 (Fri Dec 19 2003 - 09:30:23 PST)
- Re: AMBER: non-zero 10-12 coefficient (Sat Dec 13 2003 - 12:48:12 PST)
- Re: AMBER: a simple question about HBond energy... (Fri Dec 12 2003 - 13:57:47 PST)
- Re: AMBER: order parameter (Fri Dec 12 2003 - 13:29:26 PST)
- Re: AMBER: How to use quasih? (Thu Dec 11 2003 - 08:34:39 PST)
- Re: AMBER: Carbohydrate connectivity (Thu Dec 11 2003 - 08:09:08 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 10:28:00 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 08:31:38 PST)
- Re: AMBER: xleap-N/C terminus (Wed Dec 10 2003 - 08:33:52 PST)
- Re: AMBER: About Temperature Regulation (Wed Dec 10 2003 - 08:30:24 PST)
- Re: AMBER: Re: initial structures (Mon Dec 08 2003 - 09:30:57 PST)
- Re: AMBER: Amber - compiler help (Thu Dec 04 2003 - 16:54:07 PST)
- Re: AMBER: sander output (Thu Dec 04 2003 - 16:51:03 PST)
- Re: AMBER: Compiling on Suse 9 Pro with ifc... (Thu Dec 04 2003 - 08:42:15 PST)
- Re: AMBER: segmentation fault (Wed Dec 03 2003 - 09:46:46 PST)
- Re: AMBER: how to calculate vibration frequency? (Wed Dec 03 2003 - 08:59:41 PST)
- Re: AMBER: Anal/MMPBSA (Tue Dec 02 2003 - 17:29:46 PST)
- Re: AMBER: partial charge (Tue Dec 02 2003 - 12:06:02 PST)
- Re: AMBER: basic questions (Tue Dec 02 2003 - 08:37:42 PST)
- Re: AMBER: partial charge (Mon Dec 01 2003 - 22:46:04 PST)
- Re: AMBER: basic questions (Mon Dec 01 2003 - 22:37:59 PST)
- Re: AMBER: Sander / Anal (Mon Dec 01 2003 - 12:58:32 PST)
- Re: AMBER: Compiling on Suse 9 Pro with ifc... (Mon Dec 01 2003 - 12:49:33 PST)
- Re: AMBER: NAD+ and NADH amber parameters (Mon Dec 01 2003 - 08:35:56 PST)
David E. Konerding
- Re: AMBER: PMEMD Performance on Beowulf systems (Mon Dec 22 2003 - 09:04:03 PST)
- Re: AMBER: PMEMD Performance on Beowulf systems (Mon Dec 22 2003 - 08:57:23 PST)
- Re: AMBER: PMEMD Performance on Beowulf systems (Mon Dec 22 2003 - 07:53:20 PST)
David Skinner
- AMBER: PMEMD Performance on IBM SP (Tue Dec 23 2003 - 12:00:45 PST)
David Smith
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 08:16:26 PST)
Do Anh Tuan
- AMBER: segmentation fault (Tue Dec 02 2003 - 20:56:32 PST)
Emmanuel Giudice
- Re: AMBER: Sander / Anal (Fri Dec 05 2003 - 09:54:20 PST)
- AMBER: Sander / Anal (Mon Dec 01 2003 - 12:06:00 PST)
Endres, Robert G.
- AMBER: problems with pressure control (Tue Dec 30 2003 - 06:38:02 PST)
Fajar Rakhman Wibowo
- AMBER: lifetime in ptraj hbond (Fri Dec 12 2003 - 01:28:45 PST)
Fan Gao
- AMBER: initial velocity (Fri Dec 19 2003 - 16:56:16 PST)
Florent Barbault
- AMBER: a simple question about HBond energy... (Thu Dec 11 2003 - 00:04:27 PST)
FyD
- Re: AMBER: Basic potential question: (Wed Dec 24 2003 - 10:35:22 PST)
- AMBER: Resp Esp charge Derive (RED v-1.0) release (Wed Dec 03 2003 - 11:09:39 PST)
Giovanni
- AMBER: MM-PBSA question (Wed Dec 03 2003 - 10:10:10 PST)
Heather A.Carlson
- AMBER: length of deltaG calcs (Mon Dec 15 2003 - 07:32:48 PST)
Herbert Georg
- Re: AMBER: minimization on sander (Mon Dec 15 2003 - 13:21:13 PST)
- AMBER: minimization on sander (Mon Dec 15 2003 - 12:05:25 PST)
- Re: AMBER: Compiling on Suse 9 Pro with ifc... (Thu Dec 04 2003 - 04:56:55 PST)
- Re: AMBER: Compiling on Suse 9 Pro with ifc... (Wed Dec 03 2003 - 11:13:42 PST)
- Re: AMBER: Compiling on Suse 9 Pro with ifc... (Wed Dec 03 2003 - 06:04:30 PST)
- Re: AMBER: Compiling on Suse 9 Pro with ifc... (Wed Dec 03 2003 - 05:26:07 PST)
- AMBER: Compiling on Suse 9 Pro with ifc... (Mon Dec 01 2003 - 11:17:15 PST)
Holger Gohlke
- Re: AMBER: nmode statistics (Wed Dec 17 2003 - 23:09:05 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 08:10:05 PST)
- Re: AMBER: nmode, trajectory (Sat Dec 13 2003 - 07:42:39 PST)
- Re: AMBER: ANAL/MMPBSA (Thu Dec 04 2003 - 00:42:06 PST)
- Re: AMBER: MM-PBSA question (Wed Dec 03 2003 - 10:58:23 PST)
- Re: AMBER: Re: Nmode problem (Mon Dec 01 2003 - 06:17:37 PST)
Ioana Cozmuta
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 11:14:40 PST)
Jagannadh B
- AMBER: Paramters for beta and gamma peptides (Thu Dec 04 2003 - 04:34:43 PST)
Jessica Swanson
- AMBER: parmscan (Fri Dec 12 2003 - 10:39:19 PST)
Jiri Matousek
- AMBER: GIBBS - PMF question: How to get <dV/d_lam> during TI calculations? (Mon Dec 22 2003 - 01:51:25 PST)
- AMBER: GIBBS - PMFquestion (Wed Dec 03 2003 - 02:47:41 PST)
Jiri Sponer
- Re: AMBER: Mg2+ parameters for RNA usage (Wed Dec 10 2003 - 11:32:57 PST)
- Re: AMBER: Mg2+ parameters for RNA usage (Wed Dec 10 2003 - 06:21:24 PST)
Jiten
- Re: AMBER: Carbohydrate connectivity (Thu Dec 11 2003 - 08:04:44 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 09:55:51 PST)
- Re: AMBER: xleap-N/C terminus (Wed Dec 10 2003 - 05:10:15 PST)
- Re: AMBER: NAD+ and NADH amber parameters (Sun Dec 07 2003 - 20:17:53 PST)
- AMBER: NAD+ and NADH amber parameters (Mon Dec 01 2003 - 06:01:17 PST)
Joey Harriman
- Re: AMBER: MOPAC from antechamber (Wed Dec 10 2003 - 10:08:13 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 10:05:44 PST)
John
- RE: AMBER: xleap-N/C terminus (Wed Dec 10 2003 - 07:46:22 PST)
- AMBER: xleap-N/C terminus (Wed Dec 10 2003 - 04:34:13 PST)
- RE: AMBER: TFE solvent box (Fri Dec 05 2003 - 06:25:42 PST)
- AMBER: TFE solvent box (Thu Dec 04 2003 - 03:16:33 PST)
John Mongan
- AMBER: HT vs no HT (Mon Dec 22 2003 - 11:18:31 PST)
Jory Zmuda
- AMBER: Nmode analysis ptn-ligand complex (Tue Dec 16 2003 - 15:11:13 PST)
Junmei Wang
- Re: AMBER: RESP charges (Thu Dec 18 2003 - 18:29:45 PST)
- Re: AMBER: RESP charges (Thu Dec 18 2003 - 13:17:28 PST)
- Re: AMBER: RESP charges (Thu Dec 11 2003 - 08:55:21 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 15:29:19 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 13:07:24 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 10:38:15 PST)
- Re: AMBER: gaff atom types for phosphor compouds (Tue Dec 09 2003 - 07:28:08 PST)
kbyun.wesleyan.edu
- AMBER: nmode statistics (Wed Dec 17 2003 - 11:52:51 PST)
- AMBER: nmode, trajectory (Fri Dec 12 2003 - 09:05:08 PST)
L Jin
- Re: AMBER: Antechamber & Ptraj/Rdparm (Wed Dec 31 2003 - 03:44:00 PST)
- AMBER: Constant temperature (Sat Dec 27 2003 - 03:29:13 PST)
- AMBER: MD: restrt (Fri Dec 19 2003 - 02:47:55 PST)
- AMBER: Energy map (Mon Dec 15 2003 - 06:42:52 PST)
- AMBER: Antechamber:charges missing (Fri Dec 12 2003 - 07:45:35 PST)
- Re: AMBER: Antechamber & Ptraj/Rdparm (Fri Dec 12 2003 - 03:35:46 PST)
- Re: AMBER: ambpdb (Fri Dec 12 2003 - 03:24:42 PST)
- AMBER: ambpdb (Fri Dec 12 2003 - 02:43:36 PST)
- Re: AMBER: About Temperature Regulation (Wed Dec 10 2003 - 09:06:25 PST)
- AMBER: Antechamber & Ptraj/Rdparm (Wed Dec 10 2003 - 07:07:25 PST)
- AMBER: About Temperature Regulation (Wed Dec 10 2003 - 07:09:00 PST)
- AMBER: Small problems (Mon Dec 08 2003 - 09:47:47 PST)
- AMBER: MD (Mon Dec 08 2003 - 09:45:01 PST)
Lee, Matt
- AMBER: no "Input orientation" in g98 log (Mon Dec 15 2003 - 15:13:10 PST)
Li Ying
- Re: AMBER: partial charge (Wed Dec 03 2003 - 10:08:14 PST)
- Re: AMBER: partial charge (Tue Dec 02 2003 - 11:19:22 PST)
- AMBER: partial charge (Mon Dec 01 2003 - 09:31:56 PST)
Ling Zhang
- AMBER: The lost velocities in the restart file generated by Ptraj (Mon Dec 29 2003 - 13:12:47 PST)
- AMBER: The restart file generated by Ptraj (Mon Dec 29 2003 - 12:49:52 PST)
M. L. Dodson
- Re: AMBER: roar topology and coordinate files (Mon Dec 29 2003 - 16:42:49 PST)
- Re: AMBER: roar topology and coordinate files (Mon Dec 29 2003 - 12:15:57 PST)
- Re: AMBER: roar topology and coordinate files (Mon Dec 29 2003 - 05:35:42 PST)
Malone, Scott
- AMBER: Amber - compiler help (Thu Dec 04 2003 - 14:11:53 PST)
Martin Lepsik
- Re: AMBER: lifetime in ptraj hbond (Fri Dec 12 2003 - 05:29:28 PST)
Mey Khalili
- AMBER: umbrella sampling with AMBER (Mon Dec 22 2003 - 15:14:24 PST)
myang
- AMBER: order parameter (Fri Dec 12 2003 - 12:25:17 PST)
Name Removed
- AMBER: Message removed at request of author (Mon Dec 15 2003 - 07:29:55 PST)
Nikolai Smolin
- AMBER: about H-bond definition for TIP3P (Tue Dec 02 2003 - 05:44:19 PST)
northrop.chem.ucla.edu
- AMBER: GBSA problem (Thu Dec 11 2003 - 15:28:27 PST)
Pascal Auffinger
- Re: AMBER: Mg2+ parameters for RNA usage (Wed Dec 10 2003 - 07:30:47 PST)
Peter Gannett
- AMBER: Curves parameters UU and PP (Fri Dec 19 2003 - 20:08:02 PST)
- Re: AMBER: Pseudouridine force field parameters (Tue Dec 02 2003 - 04:45:01 PST)
Peter Oelschlaeger
- Re: AMBER: initial velocity (Fri Dec 19 2003 - 18:08:43 PST)
Peter VARNAI
- Re: AMBER: Mg2+ parameters for RNA usage (Wed Dec 10 2003 - 08:06:30 PST)
Piotr Cieplak
- Re: AMBER: Basic potential question: (Wed Dec 24 2003 - 10:47:57 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 14:02:33 PST)
PSR04996.mailstudenti.unimi.it
- AMBER: roar topology and coordinate files (Mon Dec 29 2003 - 01:11:28 PST)
Raghunadha Reddy Burri
- AMBER: Re: initial structures (Mon Dec 08 2003 - 09:19:10 PST)
- AMBER: initial structures (Mon Dec 08 2003 - 07:21:28 PST)
RAJA SWAMINATHAN
- AMBER: TFE solvent box (Thu Dec 04 2003 - 20:34:03 PST)
Ran Ye
- AMBER: vlimit? (Sun Dec 21 2003 - 14:15:57 PST)
rluo.uci.edu
- AMBER: Temperature dependent properties of TIP4P and TIP5P (Mon Dec 08 2003 - 09:00:21 PST)
Robert Duke
- Re: AMBER: PMEMD Performance on Beowulf systems (Mon Dec 22 2003 - 08:44:47 PST)
- Re: AMBER: PMEMD Performance on Beowulf systems (Thu Dec 18 2003 - 20:35:40 PST)
Ross Walker
- Re: AMBER: NAD+ and NADH amber parameters (Sun Dec 07 2003 - 22:22:56 PST)
- RE: AMBER: NAD+ and NADH amber parameters (Mon Dec 01 2003 - 09:07:40 PST)
Ryan Ye
- Re: AMBER: vlimit? (Tue Dec 23 2003 - 20:04:45 PST)
Salma B. Rafi
- AMBER: MSMS (Tue Dec 23 2003 - 10:36:18 PST)
Shuang Ding
- AMBER: Toolchest (Fri Dec 19 2003 - 12:45:08 PST)
Stephen.Titmuss.csiro.au
- AMBER: PMEMD Performance on Beowulf systems (Thu Dec 18 2003 - 19:19:59 PST)
Surjit Dixit
- Re: AMBER: Curves parameters UU and PP (Sat Dec 20 2003 - 07:45:28 PST)
Suse Broyde
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 09:37:58 PST)
Tammy Smith
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 10:47:34 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 10:47:34 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 10:47:34 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 10:47:34 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 10:37:33 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 10:37:33 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 10:37:33 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 10:27:33 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 10:27:33 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 10:27:33 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 10:27:33 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 10:17:33 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 10:17:33 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 10:17:33 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 10:07:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 10:07:32 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 10:07:32 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 09:57:32 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 09:57:32 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 09:57:32 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 09:57:33 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 09:47:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 09:47:32 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 09:47:32 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 09:37:32 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 09:37:32 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 09:37:32 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 09:37:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 09:27:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 09:27:32 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 09:17:32 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 09:17:32 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 09:17:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 09:07:32 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 09:07:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 09:07:32 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 08:57:31 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 08:57:31 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 08:47:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 08:47:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 08:47:32 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 08:47:32 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 08:37:31 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 08:27:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 08:27:32 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 08:27:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 08:27:32 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 08:27:32 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 08:07:31 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 07:57:31 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 07:57:31 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 07:57:31 PST)
- Re: AMBER: question about namelist (Mon Dec 15 2003 - 07:47:30 PST)
- Re: AMBER: length of deltaG calcs (Mon Dec 15 2003 - 07:37:30 PST)
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 07:37:30 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 07:37:30 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 07:17:31 PST)
- Re: AMBER: Energy map (Mon Dec 15 2003 - 06:57:29 PST)
Taner E. Dirama
- AMBER: Ptraj-HBOND (Tue Dec 02 2003 - 10:42:58 PST)
Thomas E. Cheatham, III
- Re: AMBER: water neighborhood of amide hydrogens (Mon Dec 15 2003 - 09:29:00 PST)
Ulf Ryde
- Re: AMBER: NAD+ and NADH amber parameters (Mon Dec 08 2003 - 03:05:25 PST)
- Re: AMBER: NAD+ and NADH amber parameters (Tue Dec 02 2003 - 05:20:26 PST)
Vema Aparna
- AMBER: Heme and Zn parameters (Sun Dec 14 2003 - 06:04:43 PST)
Viktor Hornak
- Re: AMBER: PMEMD Performance on Beowulf systems (Mon Dec 22 2003 - 05:47:42 PST)
Vlad Cojocaru
- AMBER: adding extra salt (Fri Dec 12 2003 - 05:34:55 PST)
- AMBER: Mg2+ parameters for RNA usage (Wed Dec 10 2003 - 05:38:59 PST)
Wayne Dawson
- Re: AMBER: Basic potential question: (Thu Dec 25 2003 - 19:04:37 PST)
- Re: AMBER: using sander without SHAKE (Wed Dec 24 2003 - 08:39:43 PST)
- AMBER: Basic potential question: (Wed Dec 24 2003 - 07:56:37 PST)
- AMBER: using sander without SHAKE (Sun Dec 21 2003 - 22:38:14 PST)
Wei Wang
- Re: AMBER: basic questions (Tue Dec 02 2003 - 08:23:13 PST)
- AMBER: basic questions (Mon Dec 01 2003 - 15:02:52 PST)
Wen Li
- AMBER: MSE (Wed Dec 24 2003 - 08:25:33 PST)
wendy.cornell.pharma.novartis.com
- Re: AMBER: missing of VdW Parameters for N3 (Wed Dec 03 2003 - 07:18:23 PST)
Wu Yingliang
- Re: AMBER: GBSA problem (Thu Dec 11 2003 - 20:20:05 PST)
- Re: Re: AMBER: ANAL/MMPBSA (Thu Dec 04 2003 - 05:29:41 PST)
- RE: Re: AMBER: ANAL/MMPBSA (Wed Dec 03 2003 - 23:53:25 PST)
- AMBER: Anal/MMPBSA (Tue Dec 02 2003 - 17:16:02 PST)
- Re: AMBER: Re: Nmode problem (Mon Dec 01 2003 - 05:34:40 PST)
Ye Mei
- Re: Re: AMBER: Compiling on Suse 9 Pro with ifc... (Fri Dec 05 2003 - 20:44:49 PST)
Youyi Peng
- AMBER: RESP charge redistribution (Mon Dec 22 2003 - 13:27:13 PST)
- Re: AMBER: RESP charges (Thu Dec 18 2003 - 15:31:51 PST)
- Re: AMBER: RESP charges (Thu Dec 18 2003 - 07:20:43 PST)
- Re: AMBER: RESP charges (Thu Dec 11 2003 - 08:41:45 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 14:50:46 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 14:48:05 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 12:57:56 PST)
- Re: AMBER: RESP charges (Wed Dec 10 2003 - 09:28:40 PST)
- AMBER: RESP charges (Wed Dec 10 2003 - 06:34:58 PST)

Amber Archive Dec 2003 by author