AMBER: GIBBS - PMF question: How to get <dV/d_lam> during TI calculations?

From: Jiri Matousek <matousek.chemi.muni.cz>
Date: Mon, 22 Dec 2003 10:51:25 +0100

Hi amber users,
I am using PMF method in gibbs with TI (CF). I am trying to find how
many steps is necessary for sampling (after quite long equilibration
(500ps)). I think it will be clear from chart <dV/d_lam> vs ps (of
sampling).
  Is there any simple way how to get values of <dV/d_lam> during
calculation (window)? I have isande=1, but this gives me <dV/d_lam> only
after each window.

Thank you in advance.

Jiri Matousek


-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Jan 14 2004 - 15:53:11 PST
Custom Search