Re: AMBER: Re: Nmode problem

From: Wu Yingliang <wuyliang.public.wh.hb.cn>
Date: Mon, 01 Dec 2003 21:34:40 +0800

Dear Dr. Holger Gohlke,


Thanks a lot for your kind help!

Here, sinece I am not a experienced AMBER user, would you like to tell me how to recompile and reinstall nmode individually without changing other AMBER7.0 modules?

Looking forward to your help once more!

Thank you very much in advance!

Best wishes,

Wu Yingliang

        


>------------------------------------------------------------------
>Hi,
>
>you need to increase the parameter MAXMEMX in sizes.h in
>$AMBERHOME/src/nmode (at least) to the value given below:
>
>> Total memory required : 20855890 real words
>
>Then recompile and reinstall nmode. This should alleviate the problems
>with nmode.
>
>With respect to the "Illegal character in prototype ..." messages: this
>is due to new rules as to define function prototypes in perl versions
>higher than 5. The only workaround I know here is to run mm_pbsa with a
>perl version that starts with "5....".
>
>Best regards
>
>Holger
>
 
                                 
        Wu Yingliang
        wuyliang.public.wh.hb.cn
          2003-12-01



-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Jan 14 2004 - 15:53:02 PST
Custom Search