Wu Yingliang schrieb:
>
> Dear Dr. Holger Gohlke,
>
> Thanks a lot for your kind help!
>
> Here, since I am not a experienced AMBER user, would you like to tell me how to recompile and reinstall nmode individually without changing other AMBER7.0 modules?
Change directory to $AMBERHOME/src/nmode and type "make nmode" there.
This should give you an executable for nmode that you can copy/move to
your exe or bin directory (probably $AMBERHOME/exe (?)).
Best regards
Holger
>
> Looking forward to your help once more!
>
> Thank you very much in advance!
>
> Best wishes,
>
> Wu Yingliang
>
>
>
> >------------------------------------------------------------------
> >Hi,
> >
> >you need to increase the parameter MAXMEMX in sizes.h in
> >$AMBERHOME/src/nmode (at least) to the value given below:
> >
> >> Total memory required : 20855890 real words
> >
> >Then recompile and reinstall nmode. This should alleviate the problems
> >with nmode.
> >
> >With respect to the "Illegal character in prototype ..." messages: this
> >is due to new rules as to define function prototypes in perl versions
> >higher than 5. The only workaround I know here is to run mm_pbsa with a
> >perl version that starts with "5....".
> >
> >Best regards
> >
> >Holger
> >
>
>
> ¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡Wu Yingliang
> ¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡wuyliang.public.wh.hb.cn
> ¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡2003-12-01
>
> -----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber.scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
--
++++++++++++++++++++++++++++++++++++++++++++++++++
Dr. Holger Gohlke
J.W. Goethe-Universität
Fachbereich Biologie und Informatik
Institut für Mikrobiologie
Marie-Curie-Str. 9
60439 Frankfurt/Main
Germany
Tel.: (+49) 69-798-29503; Fax: (+49) 69-798-29826
Email: gohlke.bioinformatik.uni-frankfurt.de
URL: http://www.rz.uni-frankfurt.de/~hgohlke
++++++++++++++++++++++++++++++++++++++++++++++++++
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Jan 14 2004 - 15:53:03 PST
