Amber Archive Jul 2001: by subject

(no subject)
- Sue Heavner (Fri Jul 06 2001 - 10:08:38 PDT)
- Michal Otyepka (Wed Jul 04 2001 - 10:20:54 PDT)
[charmm-bbs] Post-doctoral position available
- Chris Chipot (Mon Jul 23 2001 - 16:32:19 PDT)
A request regarding AMBER postings with attached files
- Anita Ilze Zvaigzne (Tue Jul 24 2001 - 03:18:42 PDT)
A request regarding AMBER postings with attached files (fwd)
- Andrew Gordon Purkiss (Tue Jul 24 2001 - 04:14:29 PDT)
About Delphi...
- backy_at_ibms.sinica.edu.tw (Wed Jul 25 2001 - 20:42:10 PDT)
about ion concentration in protein simulation
- Bill Ross (Wed Jul 11 2001 - 15:49:27 PDT)
- Shixiang Yan (Wed Jul 11 2001 - 06:48:16 PDT)
Adding ions in xleap
- Yuguang Mu (Thu Jul 26 2001 - 23:25:38 PDT)
ADDING IONS USING EDIT
- A.Madhumalar (Sat Jul 14 2001 - 10:54:31 PDT)
addions
- tianxiao young (Thu Jul 12 2001 - 19:55:38 PDT)
addles
- Carlos Simmerling (Thu Jul 05 2001 - 04:38:25 PDT)
- Guanglei Cui (Wed Jul 04 2001 - 07:11:51 PDT)
- Eoin Galligan (Wed Jul 04 2001 - 06:18:59 PDT)
Amber 6
- Luckhana (Fri Jul 06 2001 - 11:23:35 PDT)
AMBER box
- Carlos Simmerling (Thu Jul 19 2001 - 04:24:35 PDT)
- dkon_at_email.arizona.edu (Wed Jul 18 2001 - 16:20:00 PDT)
Amber installation
- Miguel Cabrera Fuentes (Fri Jul 20 2001 - 11:47:35 PDT)
Amber installation on linux
- Miguel Cabrera Fuentes (Sat Jul 21 2001 - 16:13:59 PDT)
amber5 and 77000 atoms ...
- A. Ababou (Wed Jul 04 2001 - 11:20:38 PDT)
- A. Ababou (Wed Jul 04 2001 - 08:36:16 PDT)
amber5/6
- Bill Ross (Fri Jul 06 2001 - 13:18:23 PDT)
Announcing PyMOL v0.56 (+ Windows Installer)
- DeLano, Warren (Wed Jul 18 2001 - 12:14:45 PDT)
beginners problem (fwd)
- jim caldwell (Mon Jul 30 2001 - 08:16:28 PDT)
block attachments?
- Anita Ilze Zvaigzne (Tue Jul 24 2001 - 08:06:07 PDT)
- Jake Isaacs (Tue Jul 24 2001 - 06:22:46 PDT)
box information
- Giulio Rastelli (Tue Jul 31 2001 - 10:39:29 PDT)
C DNA MONOMER UNITS
- A.Madhumalar (Tue Jul 03 2001 - 00:38:11 PDT)
CCl4 ESP Grid problem with jaguar
- GUILBAUD Philippe 153683 (Thu Jul 05 2001 - 02:09:07 PDT)
CCl4 ESP Grid problem with jaguar | 010628a (fwd)
- Bayly, Christopher (Wed Jul 04 2001 - 08:50:19 PDT)
- jim caldwell (Tue Jul 03 2001 - 12:38:21 PDT)
constraining hydrogen bonds
- Bill Ross (Sun Jul 22 2001 - 15:50:24 PDT)
- Guanglei Cui (Sun Jul 22 2001 - 09:02:45 PDT)
- A.Madhumalar (Sun Jul 22 2001 - 08:19:02 PDT)
Creating capped peptides with AMBER
- John Finke (Tue Jul 10 2001 - 17:41:28 PDT)
DelPhi's manual
- Andreas Svrcek-Seiler (Thu Jul 26 2001 - 04:55:11 PDT)
- Xiaolin Chuang (Wed Jul 25 2001 - 10:37:04 PDT)
dipolar couplings
- Richard Stefl (Mon Jul 16 2001 - 05:30:07 PDT)
dissociation of protein from DNA in MD
- David Case (Sat Jul 21 2001 - 13:15:13 PDT)
- Michael Cooney (Sat Jul 21 2001 - 12:50:27 PDT)
equilibriating LES
- Carlos Simmerling (Thu Jul 19 2001 - 04:22:54 PDT)
- Eoin Galligan (Thu Jul 19 2001 - 03:27:55 PDT)
Essential Dynamics
- Sanjeev B.S. (Sun Jul 15 2001 - 08:48:12 PDT)
ewald bomb in amber 6
- David Konerding (Fri Jul 13 2001 - 15:07:41 PDT)
- Thomas Cheatham (Fri Jul 13 2001 - 14:51:42 PDT)
- Michael Crowley (Fri Jul 13 2001 - 11:38:23 PDT)
- Sanjeev B.S. (Fri Jul 13 2001 - 11:30:38 PDT)
- David Konerding (Fri Jul 13 2001 - 07:28:30 PDT)
- Todd J. Minehardt (Fri Jul 13 2001 - 07:21:50 PDT)
gamess X resp : Conclusions. (fwd)
- jim caldwell (Thu Jul 05 2001 - 10:17:50 PDT)
gibbs_restrt
- jim caldwell (Mon Jul 02 2001 - 10:02:22 PDT)
- Olga Carvalho (Mon Jul 02 2001 - 05:21:00 PDT)
Help with Leap!
- Bill Ross (Mon Jul 09 2001 - 17:34:52 PDT)
- Dat H. Nguyen (Mon Jul 09 2001 - 17:17:58 PDT)
high density spot
- Guanglei Cui (Mon Jul 02 2001 - 07:49:30 PDT)
histidines normal-modes
- Jones de Andrade (Thu Jul 12 2001 - 07:04:23 PDT)
Hritz
- Jozef Hritz (Tue Jul 03 2001 - 04:58:18 PDT)
hybridization
- tianxiao young (Tue Jul 24 2001 - 07:10:55 PDT)
installing amber6
- Bill Ross (Tue Jul 17 2001 - 11:18:06 PDT)
- UMEMOTO, Kimiko (Tue Jul 17 2001 - 01:37:13 PDT)
Internal Restraints in Sander Problem
- Bill Ross (Wed Jul 11 2001 - 15:40:55 PDT)
- Manoj Cheriyan (Wed Jul 11 2001 - 15:19:31 PDT)
Intprt in PMF calculations
- Ulf Ryde (Mon Jul 23 2001 - 04:18:57 PDT)
is parm98 the same as parm99? (fwd)
- jim caldwell (Tue Jul 31 2001 - 07:59:54 PDT)
limit the distance
- Zhangxd (Mon Jul 02 2001 - 13:13:08 PDT)
MD run with constantly decreasing total energy (fwd)
- Andreas Svrcek-Seiler (Mon Jul 30 2001 - 02:06:55 PDT)
- jim caldwell (Sun Jul 29 2001 - 19:28:36 PDT)
Npairs Exceeds Max
- Anton B. Guliaev (Mon Jul 23 2001 - 10:37:48 PDT)
nucgen
- Xiaolin Chuang (Thu Jul 05 2001 - 05:06:39 PDT)
Parameters for phosphonate available?
- Gudrun Schuerer (Thu Jul 12 2001 - 06:27:46 PDT)
parm94
- eric arnoult (Fri Jul 13 2001 - 05:40:20 PDT)
parm99
- Giulio Rastelli (Thu Jul 19 2001 - 04:01:41 PDT)
Post-doctoral position available
- Chris Chipot (Mon Jul 23 2001 - 16:32:19 PDT)
potentials
- tianxiao young (Tue Jul 17 2001 - 19:58:28 PDT)
problem in xleap
- schayg_at_puskin-a206.sote.hu (Wed Jul 11 2001 - 15:25:18 PDT)
- schayg_at_puskin-a206.sote.hu (Wed Jul 11 2001 - 15:25:18 PDT)
- Bill Ross (Wed Jul 11 2001 - 09:30:08 PDT)
- Harshit Patel (Wed Jul 11 2001 - 08:13:56 PDT)
- Monica (Tue Jul 10 2001 - 20:51:18 PDT)
- Monica (Tue Jul 10 2001 - 20:51:18 PDT)
- Monica (Sun Jul 08 2001 - 23:47:48 PDT)
Problem with
- Dat H. Nguyen (Tue Jul 31 2001 - 16:22:21 PDT)
problem with xleap and sander! (fwd)
- jim caldwell (Mon Jul 30 2001 - 11:56:23 PDT)
ptraj diffusion
- Thomas Cheatham (Thu Jul 12 2001 - 12:15:46 PDT)
- dkon_at_email.arizona.edu (Thu Jul 12 2001 - 11:32:38 PDT)
ptraj to re-associate protein+DNA
- Michael Cooney (Wed Jul 25 2001 - 14:34:29 PDT)
ptraj: principal axes
- Thomas C. Bishop (Wed Jul 18 2001 - 06:23:30 PDT)
question
- Zhangxd (Thu Jul 19 2001 - 07:05:18 PDT)
Question...
- backy_at_ibms.sinica.edu.tw (Mon Jul 23 2001 - 22:57:56 PDT)
Request
- r ojha (Wed Jul 11 2001 - 11:06:23 PDT)
restarting gibbs (fwd)
- jim caldwell (Tue Jul 31 2001 - 08:00:25 PDT)
rigid body motion
- Sanjeev B.S. (Wed Jul 25 2001 - 09:00:00 PDT)
- dkon_at_email.arizona.edu (Mon Jul 23 2001 - 10:20:27 PDT)
sander minimization problems with igb=3, ntb =0
- Todd J. Minehardt (Mon Jul 16 2001 - 06:28:46 PDT)
shared memory
- Daniel GENEST (Fri Jul 06 2001 - 09:33:10 PDT)
- David Konerding (Fri Jul 06 2001 - 09:26:43 PDT)
simulating membranes with AMBER
- Thomas Huber (Tue Jul 31 2001 - 11:54:38 PDT)
simulating membranes with AMBER (fwd)
- jim caldwell (Mon Jul 30 2001 - 08:16:06 PDT)
solvation energy calculation
- Andreas Svrcek-Seiler (Thu Jul 26 2001 - 05:10:27 PDT)
- Xiaolin Chuang (Thu Jul 26 2001 - 02:12:07 PDT)
- samantha hughes (Wed Jul 25 2001 - 23:54:11 PDT)
spam
- jim caldwell (Tue Jul 24 2001 - 14:11:45 PDT)
stop COM motions in AMBER 5.0.1 question
- David Case (Mon Jul 09 2001 - 08:06:21 PDT)
Structure with coordinates of C-alpha atoms only
- Jung-Hsing Lin (Thu Jul 05 2001 - 19:23:48 PDT)
trajectory analysis
- Carlos Simmerling (Tue Jul 24 2001 - 12:22:24 PDT)
- Andreas Svrcek-Seiler (Tue Jul 24 2001 - 12:00:59 PDT)
- Bill Ross (Tue Jul 24 2001 - 11:48:54 PDT)
- dkon_at_email.arizona.edu (Tue Jul 24 2001 - 11:15:31 PDT)
Trosion parameters
- Eric ARNOULT (Wed Jul 25 2001 - 01:34:25 PDT)
vdW parameters for our friend, vanadium (fwd)
- jim caldwell (Mon Jul 30 2001 - 11:54:33 PDT)
vdw parameters for:THR-HG1, TYR-HH
- Omer Katzenelson (Mon Jul 02 2001 - 18:49:27 PDT)
water cap
- Michael Cooney (Wed Jul 25 2001 - 10:27:54 PDT)
- Guanglei Cui (Tue Jul 24 2001 - 21:29:45 PDT)
Windows Virus
- Markus Drumm (Tue Jul 24 2001 - 03:42:07 PDT)

Amber Archive Jul 2001 by subject