Amber Archive Jul 2001: by author

A. Ababou
- amber5 and 77000 atoms ... (Wed Jul 04 2001 - 11:20:38 PDT)
- amber5 and 77000 atoms ... (Wed Jul 04 2001 - 08:36:16 PDT)
A.Madhumalar
- constraining hydrogen bonds (Sun Jul 22 2001 - 08:19:02 PDT)
- ADDING IONS USING EDIT (Sat Jul 14 2001 - 10:54:31 PDT)
- C DNA MONOMER UNITS (Tue Jul 03 2001 - 00:38:11 PDT)
Andreas Svrcek-Seiler
- Re: MD run with constantly decreasing total energy (fwd) (Mon Jul 30 2001 - 02:06:55 PDT)
- Re: solvation energy calculation (Thu Jul 26 2001 - 05:10:27 PDT)
- Re: DelPhi's manual (Thu Jul 26 2001 - 04:55:11 PDT)
- Re: trajectory analysis (Tue Jul 24 2001 - 12:00:59 PDT)
Andrew Gordon Purkiss
- Re: A request regarding AMBER postings with attached files (fwd) (Tue Jul 24 2001 - 04:14:29 PDT)
Anita Ilze Zvaigzne
- Re: block attachments? (Tue Jul 24 2001 - 08:06:07 PDT)
- A request regarding AMBER postings with attached files (Tue Jul 24 2001 - 03:18:42 PDT)
Anton B. Guliaev
- Npairs Exceeds Max (Mon Jul 23 2001 - 10:37:48 PDT)
backy_at_ibms.sinica.edu.tw
- About Delphi... (Wed Jul 25 2001 - 20:42:10 PDT)
- Question... (Mon Jul 23 2001 - 22:57:56 PDT)
Bayly, Christopher
- RE: CCl4 ESP Grid problem with jaguar | 010628a (fwd) (Wed Jul 04 2001 - 08:50:19 PDT)
Bill Ross
- Re: trajectory analysis (Tue Jul 24 2001 - 11:48:54 PDT)
- Re: constraining hydrogen bonds (Sun Jul 22 2001 - 15:50:24 PDT)
- Re: installing amber6 (Tue Jul 17 2001 - 11:18:06 PDT)
- Re: about ion concentration in protein simulation (Wed Jul 11 2001 - 15:49:27 PDT)
- Re: Internal Restraints in Sander Problem (Wed Jul 11 2001 - 15:40:55 PDT)
- Re:problem in xleap (Wed Jul 11 2001 - 09:30:08 PDT)
- Re: Help with Leap! (Mon Jul 09 2001 - 17:34:52 PDT)
- Re: amber5/6 (Fri Jul 06 2001 - 13:18:23 PDT)
Carlos Simmerling
- Re: trajectory analysis (Tue Jul 24 2001 - 12:22:24 PDT)
- Re: AMBER box (Thu Jul 19 2001 - 04:24:35 PDT)
- Re: equilibriating LES (Thu Jul 19 2001 - 04:22:54 PDT)
- Re: addles (Thu Jul 05 2001 - 04:38:25 PDT)
Chris Chipot
- Post-doctoral position available (Mon Jul 23 2001 - 16:32:19 PDT)
- [charmm-bbs] Post-doctoral position available (Mon Jul 23 2001 - 16:32:19 PDT)
Daniel GENEST
- shared memory (Fri Jul 06 2001 - 09:33:10 PDT)
Dat H. Nguyen
- Problem with (Tue Jul 31 2001 - 16:22:21 PDT)
- Help with Leap! (Mon Jul 09 2001 - 17:17:58 PDT)
David Case
- Re: dissociation of protein from DNA in MD (Sat Jul 21 2001 - 13:15:13 PDT)
- Re: stop COM motions in AMBER 5.0.1 question (Mon Jul 09 2001 - 08:06:21 PDT)
David Konerding
- Re: ewald bomb in amber 6 (Fri Jul 13 2001 - 15:07:41 PDT)
- Re: ewald bomb in amber 6 (Fri Jul 13 2001 - 07:28:30 PDT)
- Re: shared memory (Fri Jul 06 2001 - 09:26:43 PDT)
DeLano, Warren
- Announcing PyMOL v0.56 (+ Windows Installer) (Wed Jul 18 2001 - 12:14:45 PDT)
dkon_at_email.arizona.edu
- trajectory analysis (Tue Jul 24 2001 - 11:15:31 PDT)
- rigid body motion (Mon Jul 23 2001 - 10:20:27 PDT)
- AMBER box (Wed Jul 18 2001 - 16:20:00 PDT)
- ptraj diffusion (Thu Jul 12 2001 - 11:32:38 PDT)
Eoin Galligan
- equilibriating LES (Thu Jul 19 2001 - 03:27:55 PDT)
- addles (Wed Jul 04 2001 - 06:18:59 PDT)
Eric ARNOULT
- Trosion parameters (Wed Jul 25 2001 - 01:34:25 PDT)
- parm94 (Fri Jul 13 2001 - 05:40:20 PDT)
Giulio Rastelli
- box information (Tue Jul 31 2001 - 10:39:29 PDT)
- parm99 (Thu Jul 19 2001 - 04:01:41 PDT)
Guanglei Cui
- water cap (Tue Jul 24 2001 - 21:29:45 PDT)
- RE: constraining hydrogen bonds (Sun Jul 22 2001 - 09:02:45 PDT)
- RE: addles (Wed Jul 04 2001 - 07:11:51 PDT)
- high density spot (Mon Jul 02 2001 - 07:49:30 PDT)
Gudrun Schuerer
- Parameters for phosphonate available? (Thu Jul 12 2001 - 06:27:46 PDT)
GUILBAUD Philippe 153683
- RE: CCl4 ESP Grid problem with jaguar (Thu Jul 05 2001 - 02:09:07 PDT)
Harshit Patel
- Re:problem in xleap (Wed Jul 11 2001 - 08:13:56 PDT)
Jake Isaacs
- block attachments? (Tue Jul 24 2001 - 06:22:46 PDT)
jim caldwell
- restarting gibbs (fwd) (Tue Jul 31 2001 - 08:00:25 PDT)
- is parm98 the same as parm99? (fwd) (Tue Jul 31 2001 - 07:59:54 PDT)
- problem with xleap and sander! (fwd) (Mon Jul 30 2001 - 11:56:23 PDT)
- vdW parameters for our friend, vanadium (fwd) (Mon Jul 30 2001 - 11:54:33 PDT)
- beginners problem (fwd) (Mon Jul 30 2001 - 08:16:28 PDT)
- simulating membranes with AMBER (fwd) (Mon Jul 30 2001 - 08:16:06 PDT)
- MD run with constantly decreasing total energy (fwd) (Sun Jul 29 2001 - 19:28:36 PDT)
- spam (Tue Jul 24 2001 - 14:11:45 PDT)
- gamess X resp : Conclusions. (fwd) (Thu Jul 05 2001 - 10:17:50 PDT)
- Re: CCl4 ESP Grid problem with jaguar | 010628a (fwd) (Tue Jul 03 2001 - 12:38:21 PDT)
- Re: gibbs_restrt (Mon Jul 02 2001 - 10:02:22 PDT)
John Finke
- Creating capped peptides with AMBER (Tue Jul 10 2001 - 17:41:28 PDT)
Jones de Andrade
- histidines normal-modes (Thu Jul 12 2001 - 07:04:23 PDT)
Jozef Hritz
- Hritz (Tue Jul 03 2001 - 04:58:18 PDT)
Jung-Hsing Lin
- Structure with coordinates of C-alpha atoms only (Thu Jul 05 2001 - 19:23:48 PDT)
Luckhana
- Amber 6 (Fri Jul 06 2001 - 11:23:35 PDT)
Manoj Cheriyan
- Internal Restraints in Sander Problem (Wed Jul 11 2001 - 15:19:31 PDT)
Markus Drumm
- Windows Virus (Tue Jul 24 2001 - 03:42:07 PDT)
Michael Cooney
- ptraj to re-associate protein+DNA (Wed Jul 25 2001 - 14:34:29 PDT)
- Re: water cap (Wed Jul 25 2001 - 10:27:54 PDT)
- dissociation of protein from DNA in MD (Sat Jul 21 2001 - 12:50:27 PDT)
Michael Crowley
- Re: ewald bomb in amber 6 (Fri Jul 13 2001 - 11:38:23 PDT)
Michal Otyepka
- (no subject) (Wed Jul 04 2001 - 10:20:54 PDT)
Miguel Cabrera Fuentes
- Amber installation on linux (Sat Jul 21 2001 - 16:13:59 PDT)
- Amber installation (Fri Jul 20 2001 - 11:47:35 PDT)
Monica
- problem in xleap (Tue Jul 10 2001 - 20:51:18 PDT)
- problem in xleap (Tue Jul 10 2001 - 20:51:18 PDT)
- problem in xleap (Sun Jul 08 2001 - 23:47:48 PDT)
Olga Carvalho
- gibbs_restrt (Mon Jul 02 2001 - 05:21:00 PDT)
Omer Katzenelson
- vdw parameters for:THR-HG1, TYR-HH (Mon Jul 02 2001 - 18:49:27 PDT)
r ojha
- Request (Wed Jul 11 2001 - 11:06:23 PDT)
Richard Stefl
- dipolar couplings (Mon Jul 16 2001 - 05:30:07 PDT)
samantha hughes
- Re: solvation energy calculation (Wed Jul 25 2001 - 23:54:11 PDT)
Sanjeev B.S.
- Re: rigid body motion (Wed Jul 25 2001 - 09:00:00 PDT)
- Essential Dynamics (Sun Jul 15 2001 - 08:48:12 PDT)
- Re: ewald bomb in amber 6 (Fri Jul 13 2001 - 11:30:38 PDT)
schayg_at_puskin-a206.sote.hu
- Re: problem in xleap (Wed Jul 11 2001 - 15:25:18 PDT)
- Re: problem in xleap (Wed Jul 11 2001 - 15:25:18 PDT)
Shixiang Yan
- about ion concentration in protein simulation (Wed Jul 11 2001 - 06:48:16 PDT)
Sue Heavner
- (no subject) (Fri Jul 06 2001 - 10:08:38 PDT)
Thomas C. Bishop
- ptraj: principal axes (Wed Jul 18 2001 - 06:23:30 PDT)
Thomas Cheatham
- Re: ewald bomb in amber 6 (Fri Jul 13 2001 - 14:51:42 PDT)
- Re: ptraj diffusion (Thu Jul 12 2001 - 12:15:46 PDT)
Thomas Huber
- Re: simulating membranes with AMBER (Tue Jul 31 2001 - 11:54:38 PDT)
tianxiao young
- hybridization (Tue Jul 24 2001 - 07:10:55 PDT)
- potentials (Tue Jul 17 2001 - 19:58:28 PDT)
- addions (Thu Jul 12 2001 - 19:55:38 PDT)
Todd J. Minehardt
- sander minimization problems with igb=3, ntb =0 (Mon Jul 16 2001 - 06:28:46 PDT)
- ewald bomb in amber 6 (Fri Jul 13 2001 - 07:21:50 PDT)
Ulf Ryde
- Intprt in PMF calculations (Mon Jul 23 2001 - 04:18:57 PDT)
UMEMOTO, Kimiko
- installing amber6 (Tue Jul 17 2001 - 01:37:13 PDT)
Xiaolin Chuang
- solvation energy calculation (Thu Jul 26 2001 - 02:12:07 PDT)
- DelPhi's manual (Wed Jul 25 2001 - 10:37:04 PDT)
- nucgen (Thu Jul 05 2001 - 05:06:39 PDT)
Yuguang Mu
- Re: Adding ions in xleap (Thu Jul 26 2001 - 23:25:38 PDT)
Zhangxd
- question (Thu Jul 19 2001 - 07:05:18 PDT)
- limit the distance (Mon Jul 02 2001 - 13:13:08 PDT)

Amber Archive Jul 2001 by author