Amber Archive Dec 2005 By Thread
- AMBER: Fluorine in MM-PBSA (AMBER8) yuann.bioinfo.ndhu.edu.tw (Wed Nov 30 2005 - 08:30:36 PST)
- Re: AMBER: Fluorine in MM-PBSA (AMBER8) sychen (Wed Nov 30 2005 - 21:43:55 PST)
- Re: AMBER: MM-PBSA: plot the "Ggas+Gsol" vs time Holger Gohlke (Wed Nov 30 2005 - 23:06:49 PST)
- AMBER: Creating an Ester with Antechamber/Gaff John O'Mahony (Thu Dec 01 2005 - 01:46:40 PST)
- Re: AMBER: Creating an Ester with Antechamber/Gaff David A. Case (Fri Dec 02 2005 - 20:05:16 PST)
- AMBER: regarding ambpdb S.Sundar Raman (Thu Dec 01 2005 - 02:40:58 PST)
- Re: AMBER: regarding ambpdb Ilyas Yildirim (Thu Dec 01 2005 - 02:54:03 PST)
- Re: AMBER: regarding ambpdb S.Sundar Raman (Thu Dec 01 2005 - 05:39:31 PST)
- Re: AMBER: regarding ambpdb Carlos Simmerling (Thu Dec 01 2005 - 05:57:39 PST)
- Re: AMBER: regarding ambpdb S.Sundar Raman (Thu Dec 01 2005 - 05:39:31 PST)
- Re: AMBER: regarding ambpdb Ilyas Yildirim (Thu Dec 01 2005 - 02:54:03 PST)
- Re: AMBER: Residual Dipolar Refinement David A. Case (Thu Dec 01 2005 - 06:22:11 PST)
- AMBER: MD without a thermostat Vlad Cojocaru (Thu Dec 01 2005 - 07:32:57 PST)
- Re: AMBER: MD without a thermostat David A. Case (Thu Dec 01 2005 - 11:42:51 PST)
- AMBER: no thermostat versus very weak thermostat Vlad Cojocaru (Thu Dec 01 2005 - 07:57:15 PST)
- AMBER: Some explanations of MM_PBSA @DECOMP OUTPUT file? Peng Tao (Thu Dec 01 2005 - 08:35:09 PST)
- AMBER: Mg2+ issues of using MM-PB/GBSA mingche Pan (Thu Dec 01 2005 - 11:01:24 PST)
- Re: AMBER: Mg2+ issues of using MM-PB/GBSA Carlos Simmerling (Thu Dec 01 2005 - 11:26:11 PST)
- Re: AMBER: Mg2+ issues of using MM-PB/GBSA David A. Case (Thu Dec 01 2005 - 11:47:20 PST)
- Re: AMBER: Mg2+ issues of using MM-PB/GBSA Thomas Cheatham (Thu Dec 01 2005 - 21:27:21 PST)
- Re: AMBER: Mg2+ issues of using MM-PB/GBSA mingche Pan (Fri Dec 02 2005 - 08:32:15 PST)
- Re: AMBER: Mg2+ issues of using MM-PB/GBSA mingche Pan (Fri Dec 02 2005 - 10:09:28 PST)
- Re: AMBER: Mg2+ issues of using MM-PB/GBSA mingche Pan (Fri Dec 02 2005 - 11:36:53 PST)
- Re: AMBER: Mg2+ issues of using MM-PB/GBSA. . Don.Bashford.stjude.org (Mon Dec 05 2005 - 10:09:20 PST)
- AMBER: Installation of AMBER8 on a PC with a Pentium EE type CPU Cenk Andac (Sat Dec 31 2005 - 10:24:30 PST)
- AMBER: Radial Distribution functions by ptraj Priti Hansia (Thu Dec 01 2005 - 11:44:02 PST)
- AMBER: Position restraints and Models Steve Seibold (Thu Dec 01 2005 - 12:54:06 PST)
- AMBER: Questions about MM-PBSA in Amber8 zgleo (Thu Dec 01 2005 - 21:04:26 PST)
- AMBER: Problem in running AMBER 7 in solaris ! Pradipta Bandyopadhyay (Fri Dec 02 2005 - 01:17:19 PST)
- Re: AMBER: Problem in running AMBER 7 in solaris ! Atro Tossavainen (Fri Dec 02 2005 - 04:14:42 PST)
- AMBER: Problem with sander test suites in solaris ! Pradipta Bandyopadhyay (Fri Dec 02 2005 - 06:26:05 PST)
- AMBER: ptraj crash error Simon Whitehead (Fri Dec 02 2005 - 09:51:47 PST)
- Re: AMBER: ptraj crash error David E. Konerding (Fri Dec 02 2005 - 10:24:35 PST)
- AMBER: rotational motion in periodic simulation Douali, Latifa (Fri Dec 02 2005 - 10:50:28 PST)
- Re: AMBER: rotational motion in periodic simulation David A. Case (Fri Dec 02 2005 - 15:06:22 PST)
- AMBER: Replica-Exchange MD from AMBER8! Peng Tao (Fri Dec 02 2005 - 14:28:27 PST)
- Re: AMBER: Replica-Exchange MD from AMBER8! Carlos Simmerling (Fri Dec 02 2005 - 14:49:25 PST)
- Re: AMBER: Replica-Exchange MD from AMBER8! Peng Tao (Sat Dec 03 2005 - 09:13:15 PST)
- Re: AMBER: Replica-Exchange MD from AMBER8! Peng Tao (Sat Dec 03 2005 - 12:19:12 PST)
- Re: AMBER: Replica-Exchange MD from AMBER8! Carlos Simmerling (Sat Dec 03 2005 - 13:11:07 PST)
- Re: AMBER: Replica-Exchange MD from AMBER8! Carlos Simmerling (Fri Dec 02 2005 - 14:49:25 PST)
- AMBER: ERROR in readParm: ...failed to find BONDS_WITHOUT_HYDROGEN Rhoad, Jonathan S. (Fri Dec 02 2005 - 15:02:36 PST)
- Re: AMBER: Using OPLS atom types David A. Case (Fri Dec 02 2005 - 20:01:17 PST)
- Re: AMBER: Using OPLS atom types Bill Ross (Sat Dec 03 2005 - 10:15:53 PST)
- AMBER: parmchk bug fix David A. Case (Fri Dec 02 2005 - 20:22:21 PST)
- AMBER: parmchk bug fix, with attachment David A. Case (Fri Dec 02 2005 - 20:33:20 PST)
- AMBER: Alignment tensor and Interia tensor RadhaKumari Yadav (Sat Dec 03 2005 - 08:58:01 PST)
- Re: AMBER: Alignment tensor and Interia tensor David A. Case (Sat Dec 03 2005 - 11:05:30 PST)
- AMBER: The error during calculating PB with pbsa zhli_2000.126.com (Sun Dec 04 2005 - 20:39:19 PST)
- Re: AMBER: The error during calculating PB with pbsa Ray Luo (Sun Dec 04 2005 - 18:16:09 PST)
- AMBER: RMSD Calculations Kara Di Giorgio (Mon Dec 05 2005 - 07:22:03 PST)
- Re: AMBER: RMSD Calculations Carlos Simmerling (Mon Dec 05 2005 - 08:00:23 PST)
- Re: AMBER: RMSD Calculations Kara Wald (Mon Dec 05 2005 - 08:39:44 PST)
- Re: AMBER: RMSD Calculations Carlos Simmerling (Mon Dec 05 2005 - 08:56:36 PST)
- Re: AMBER: RMSD Calculations Kara Wald (Mon Dec 05 2005 - 08:39:44 PST)
- Re: AMBER: RMSD Calculations kkirschn.hamilton.edu (Mon Dec 05 2005 - 08:29:23 PST)
- Re: AMBER: RMSD Calculations Thomas Cheatham (Mon Dec 05 2005 - 14:50:36 PST)
- AMBER: AMBER vs QM: base pairing and stacking Jiri Sponer (Wed Dec 07 2005 - 10:22:02 PST)
- AMBER: distance restraint simulation Ed Pate (Tue Dec 27 2005 - 10:36:44 PST)
- Re: AMBER: distance restraint simulation David A. Case (Tue Dec 27 2005 - 12:31:03 PST)
- Re: AMBER: RMSD Calculations Carlos Simmerling (Mon Dec 05 2005 - 08:00:23 PST)
- AMBER: RESP: Question Carlos Jaime (Mon Dec 05 2005 - 09:43:16 PST)
- Re: AMBER: RESP: Question Piotr Cieplak (Mon Dec 05 2005 - 10:00:37 PST)
- Re: AMBER: RESP: Question FyD (Mon Dec 05 2005 - 13:31:32 PST)
- Re: AMBER: RESP: Question FyD (Tue Dec 06 2005 - 05:13:49 PST)
- Re[2]: AMBER: What does a crash mean while running a md simulation? sychen (Tue Dec 06 2005 - 04:16:49 PST)
- RE: Re[2]: AMBER: What does a crash mean while running a md simulation? Ross Walker (Tue Dec 06 2005 - 08:54:11 PST)
- AMBER: 6-thioguanine E.A.Moore (Tue Dec 06 2005 - 06:31:59 PST)
- AMBER: MM_PBSA parameters Nelson Fonseca (Tue Dec 06 2005 - 07:26:55 PST)
- AMBER: hi Germán Sciaini (Wed Dec 07 2005 - 02:51:06 PST)
- Re: AMBER: hi David A. Case (Wed Dec 07 2005 - 12:01:52 PST)
- AMBER: about resp JAVIER PEREZ (Wed Dec 07 2005 - 04:12:48 PST)
- Re:AMBER: about resp Kateryna Miroshnychenko (Wed Dec 07 2005 - 05:50:07 PST)
- AMBER: Relax in tLEaP ? FyD (Wed Dec 07 2005 - 06:00:38 PST)
- Re: AMBER: Relax in tLEaP ? David A. Case (Wed Dec 07 2005 - 11:58:43 PST)
- AMBER: Clustering - MMTSB Toolkit kclust kkirschn.hamilton.edu (Wed Dec 07 2005 - 10:43:52 PST)
- Re: AMBER: Clustering - MMTSB Toolkit kclust Adrian Roitberg (Wed Dec 07 2005 - 12:46:50 PST)
- AMBER: Adding/recognizing calcium atoms Nitin Bhardwaj (Wed Dec 07 2005 - 13:24:38 PST)
- Re: AMBER: Adding/recognizing calcium atoms Bill Ross (Wed Dec 07 2005 - 13:32:05 PST)
- AMBER: error about using ambmask zhli_2000.126.com (Thu Dec 08 2005 - 05:40:34 PST)
- Re: AMBER: error about using ambmask Viktor Hornak (Thu Dec 08 2005 - 05:53:22 PST)
- AMBER: Question on makeing up of missing atoms Benjamin Juhl (Fri Dec 09 2005 - 04:30:57 PST)
- Re: AMBER: Question on makeing up of missing atoms Carlos Simmerling (Fri Dec 09 2005 - 04:57:06 PST)
- AMBER: reading frcmod torsional parameters ivan.mmb.pcb.ub.es (Mon Dec 12 2005 - 05:44:36 PST)
- Re: AMBER: reading frcmod torsional parameters David A. Case (Mon Dec 12 2005 - 08:56:02 PST)
- Re: AMBER: reading frcmod torsional parameters ivan.mmb.pcb.ub.es (Tue Dec 13 2005 - 07:42:37 PST)
- Re: AMBER: reading frcmod torsional parameters David A. Case (Mon Dec 12 2005 - 08:56:02 PST)
- AMBER: question about mmpbsa cui wei (Mon Dec 12 2005 - 23:33:08 PST)
- Re: AMBER: question about mmpbsa Ray Luo (Mon Dec 12 2005 - 19:34:13 PST)
- Re: AMBER: question about mmpbsa cui wei (Tue Dec 13 2005 - 17:09:29 PST)
- Re: AMBER: question about mmpbsa Ray Luo (Thu Dec 15 2005 - 10:08:55 PST)
- AMBER: E of amber calculations YoungJin Cho (Wed Dec 14 2005 - 09:34:47 PST)
- Re: AMBER: E of amber calculations Carlos Simmerling (Thu Dec 15 2005 - 04:30:08 PST)
- RE: AMBER: E of amber calculations Ross Walker (Thu Dec 15 2005 - 08:23:46 PST)
- Re: AMBER: question about mmpbsa cui wei (Tue Dec 13 2005 - 17:09:29 PST)
- Re: AMBER: question about mmpbsa Ray Luo (Mon Dec 12 2005 - 19:34:13 PST)
- AMBER: How to add water to calculate MMPBSA Kitiyaporn Wittayanarakul (Wed Dec 14 2005 - 10:06:53 PST)
- Re: AMBER: How to add water to calculate MMPBSA David A. Case (Wed Dec 14 2005 - 15:50:13 PST)
- Re: AMBER: How to add water to calculate MMPBSA. . Don.Bashford.stjude.org (Thu Dec 15 2005 - 09:13:30 PST)
- Re: AMBER: How to add water to calculate MMPBSA. . Thomas Cheatham (Thu Dec 15 2005 - 10:09:47 PST)
- Re: AMBER: How to add water to calculate MMPBSA. . Don.Bashford.stjude.org (Thu Dec 15 2005 - 09:13:30 PST)
- Re: AMBER: How to add water to calculate MMPBSA David A. Case (Wed Dec 14 2005 - 15:50:13 PST)
- AMBER: nmode error: GNORM is greater than the requested maximum zhli_2000.126.com (Wed Dec 14 2005 - 18:16:07 PST)
- Re: AMBER: nmode error: GNORM is greater than the requested maximum David A. Case (Fri Dec 16 2005 - 14:08:21 PST)
- AMBER: error with compiling amber8 with lam on intel pc clusters Ye Mei (Wed Dec 14 2005 - 19:36:54 PST)
- Re: AMBER: error with compiling amber8 with lam on intel pc clusters Xuebin Qiao (Wed Dec 14 2005 - 23:57:24 PST)
- RE: AMBER: error with compiling amber8 with lam on intel pc clusters Ross Walker (Thu Dec 15 2005 - 08:11:05 PST)
- AMBER: about antechamber(amber8) linfu (Wed Dec 14 2005 - 23:51:16 PST)
- Re: AMBER: about antechamber(amber8) Carlos Simmerling (Thu Dec 15 2005 - 04:45:59 PST)
- RE: AMBER: about antechamber(amber8) Junmei Wang (Thu Dec 15 2005 - 07:54:40 PST)
- AMBER: aniso and iso Yam (Thu Dec 15 2005 - 02:11:45 PST)
- Re: AMBER: aniso and iso David A. Case (Thu Dec 15 2005 - 08:28:28 PST)
- Re: AMBER: aniso and iso Yam (Mon Dec 19 2005 - 00:17:43 PST)
- Re: AMBER: aniso and iso Carlos Simmerling (Mon Dec 19 2005 - 04:26:37 PST)
- AMBER: parameters for fluorine atom Morena Spreafico (Thu Dec 15 2005 - 04:33:52 PST)
- Re: AMBER: parameters for fluorine atom Carlos Simmerling (Thu Dec 15 2005 - 04:47:20 PST)
- AMBER: Build for single precision David Caliga (Thu Dec 15 2005 - 07:31:02 PST)
- Re: AMBER: Build for single precision Robert Duke (Thu Dec 15 2005 - 08:23:49 PST)
- RE: AMBER: Build for single precision Ross Walker (Thu Dec 15 2005 - 08:29:35 PST)
- AMBER: parallel AMBER on cluster Kateryna Miroshnychenko (Thu Dec 15 2005 - 10:16:17 PST)
- Re: AMBER: parallel AMBER on cluster Robert Duke (Thu Dec 15 2005 - 10:37:22 PST)
- RE: AMBER: parallel AMBER on cluster Ross Walker (Thu Dec 15 2005 - 10:38:57 PST)
- Re: AMBER: parallel AMBER on cluster Carlos Simmerling (Thu Dec 15 2005 - 10:55:55 PST)
- AMBER: | ERROR: Could not read coords from rst file Jiapu.Zhang.csiro.au (Thu Dec 15 2005 - 18:26:46 PST)
- Re: AMBER: | ERROR: Could not read coords from rst file Robert Duke (Thu Dec 15 2005 - 19:14:35 PST)
- AMBER: installation on a dual core Barbault Florent (Fri Dec 16 2005 - 06:00:08 PST)
- Re: AMBER: installation on a dual core Nelson Fonseca (Fri Dec 16 2005 - 06:14:22 PST)
- AMBER: About Salt concentration Varsha Goyal (Fri Dec 16 2005 - 16:03:05 PST)
- Re: AMBER: About Salt concentration Jiri Sponer (Fri Dec 16 2005 - 17:05:13 PST)
- Re: AMBER: About Salt concentration Varsha Goyal (Fri Dec 16 2005 - 17:37:45 PST)
- RE: AMBER: About Salt concentration David Cowburn (Wed Dec 21 2005 - 13:33:15 PST)
- Re: AMBER: About Salt concentration Jiri Sponer (Fri Dec 16 2005 - 17:05:13 PST)
- AMBER: distance restraints Ed Pate (Sat Dec 17 2005 - 14:43:32 PST)
- Re: AMBER: distance restraints Carlos Simmerling (Sat Dec 17 2005 - 15:08:28 PST)
- AMBER: | ERROR: Could not read coords from *.rst Jiapu.Zhang.csiro.au (Sat Dec 17 2005 - 15:59:22 PST)
- AMBER: No exchange among replicas in REMD! Peng Tao (Sun Dec 18 2005 - 14:01:28 PST)
- Re: AMBER: No exchange among replicas in REMD! Carlos Simmerling (Sun Dec 18 2005 - 14:26:42 PST)
- Re: AMBER: No exchange among replicas in REMD! Peng Tao (Sun Dec 18 2005 - 17:45:03 PST)
- Re: AMBER: No exchange among replicas in REMD! Carlos Simmerling (Sun Dec 18 2005 - 18:23:14 PST)
- Re: AMBER: No exchange among replicas in REMD! Peng Tao (Mon Dec 19 2005 - 06:57:30 PST)
- Re: AMBER: No exchange among replicas in REMD! Carlos Simmerling (Mon Dec 19 2005 - 08:35:30 PST)
- Re: AMBER: No exchange among replicas in REMD! Peng Tao (Mon Dec 19 2005 - 10:35:24 PST)
- Re: AMBER: No exchange among replicas in REMD! Peng Tao (Sun Dec 18 2005 - 17:45:03 PST)
- Re: AMBER: No exchange among replicas in REMD! Carlos Simmerling (Sun Dec 18 2005 - 14:26:42 PST)
- AMBER: No exchange among replicas in REMD! Peng Tao (Sun Dec 18 2005 - 14:11:06 PST)
- Re: AMBER: No exchange among replicas in REMD! Carlos Simmerling (Sun Dec 18 2005 - 14:27:25 PST)
- Re: AMBER: No exchange among replicas in REMD! Adrian E. Roitberg (Sun Dec 18 2005 - 15:16:22 PST)
- Re: AMBER: No exchange among replicas in REMD! Carlos Simmerling (Sun Dec 18 2005 - 18:22:48 PST)
- AMBER: a quistion about compile cui wei (Mon Dec 19 2005 - 04:10:07 PST)
- Re: AMBER: a quistion about compile David A. Case (Mon Dec 19 2005 - 08:22:58 PST)
- Re: AMBER: a quistion about compile cui wei (Mon Dec 19 2005 - 17:00:20 PST)
- Re: AMBER: a quistion about compile snowyowls (Tue Dec 20 2005 - 05:30:07 PST)
- Re: AMBER: a quistion about compile David A. Case (Tue Dec 20 2005 - 08:56:58 PST)
- Re: AMBER: a quistion about compile snowyowls (Wed Dec 21 2005 - 06:53:21 PST)
- Re: AMBER: a quistion about compile David A. Case (Wed Dec 21 2005 - 13:01:52 PST)
- Re: AMBER: a quistion about compile snowyowls (Fri Dec 23 2005 - 04:32:52 PST)
- Re: AMBER: a quistion about compile Wei Zhang (Mon Dec 19 2005 - 09:01:22 PST)
- Re: AMBER: a quistion about compile cui wei (Mon Dec 19 2005 - 17:03:46 PST)
- Re: AMBER: a quistion about compile Wei Zhang (Tue Dec 20 2005 - 08:35:34 PST)
- Re: AMBER: a quistion about compile cui wei (Mon Dec 19 2005 - 17:03:46 PST)
- Re: AMBER: a quistion about compile David A. Case (Mon Dec 19 2005 - 08:22:58 PST)
- AMBER: MD problems (SHAKE) blakrose.gazeta.pl (Mon Dec 19 2005 - 04:49:41 PST)
- AMBER: Atoms restrain Angelo Pugliese (Mon Dec 19 2005 - 05:09:35 PST)
- Re: AMBER: Atoms restrain David A. Case (Mon Dec 19 2005 - 08:20:25 PST)
- AMBER: compiling leap with Xeon EM64 (suse linux 9.2) HL Eastwood (Mon Dec 19 2005 - 07:17:08 PST)
- AMBER: re: leap compilation problems xeon EM64 processor HL Eastwood (Mon Dec 19 2005 - 07:30:57 PST)
- AMBER: MD problems/shake blakrose.gazeta.pl (Mon Dec 19 2005 - 12:34:52 PST)
- Re: AMBER: MD problems/shake Thomas E. Cheatham, III (Mon Dec 19 2005 - 12:53:40 PST)
- Re: AMBER: MD problems/shake Bill Ross (Mon Dec 19 2005 - 12:59:04 PST)
- Re: AMBER: MD problems/shake blakrose.gazeta.pl (Mon Dec 19 2005 - 14:45:43 PST)
- Re: AMBER: MD problems/shake Thomas E. Cheatham, III (Mon Dec 19 2005 - 15:40:40 PST)
- Re: AMBER: MD problems/shake Thomas E. Cheatham, III (Tue Dec 20 2005 - 11:20:26 PST)
- Re: AMBER: MD problems/shake Thomas E. Cheatham, III (Mon Dec 19 2005 - 15:40:40 PST)
- Re: AMBER: MD problems/shake Bill Ross (Mon Dec 19 2005 - 15:14:10 PST)
- Re: AMBER: MD problems/shake blakrose.gazeta.pl (Mon Dec 19 2005 - 15:33:12 PST)
- Re: AMBER: MD problems/shake blakrose.gazeta.pl (Mon Dec 19 2005 - 15:44:59 PST)
- Re: AMBER: MD problems/shake Bill Ross (Mon Dec 19 2005 - 15:50:33 PST)
- Re: AMBER: MD problems/shake Bill Ross (Mon Dec 19 2005 - 15:54:01 PST)
- Re: AMBER: MD problems/shake blakrose.gazeta.pl (Mon Dec 19 2005 - 16:03:08 PST)
- Re: AMBER: MD problems/shake blakrose.gazeta.pl (Mon Dec 19 2005 - 16:07:44 PST)
- Re: AMBER: MD problems/shake blakrose.gazeta.pl (Tue Dec 20 2005 - 15:17:45 PST)
- AMBER: rdc multiple tensors dmcelh.uchicago.edu (Mon Dec 19 2005 - 15:01:13 PST)
- AMBER: Ligand problem bybaker.itsa.ucsf.edu (Mon Dec 19 2005 - 16:40:22 PST)
- Re: AMBER: Ligand problem blakrose.gazeta.pl (Mon Dec 19 2005 - 17:02:54 PST)
- Re: AMBER: Ligand problem Suxin Zheng (Mon Dec 19 2005 - 17:05:13 PST)
- AMBER: Sander.LES questions Bing Liu (Tue Dec 20 2005 - 06:51:09 PST)
- Re: AMBER: Sander.LES questions Carlos Simmerling (Tue Dec 20 2005 - 07:07:12 PST)
- AMBER: rmsd Anthony Cruz (Tue Dec 20 2005 - 11:17:51 PST)
- Fwd: AMBER: rdc multiple tensors dmcelh.uchicago.edu (Tue Dec 20 2005 - 09:55:51 PST)
- AMBER: Re: Ligand problem bybaker.itsa.ucsf.edu (Tue Dec 20 2005 - 10:50:03 PST)
- Re: AMBER: Re: Ligand problem Ilyas Yildirim (Tue Dec 20 2005 - 16:39:02 PST)
- Re: AMBER: MD problems/shake-many thanks blakrose.gazeta.pl (Tue Dec 20 2005 - 15:04:24 PST)
- AMBER: some questions about nmode zhli_2000.126.com (Tue Dec 20 2005 - 18:30:22 PST)
- AMBER: No skew or curtosis when zero variance in moment Ye Mei (Wed Dec 21 2005 - 07:56:43 PST)
- Re: AMBER: No skew or curtosis when zero variance in moment David A. Case (Thu Dec 22 2005 - 10:14:25 PST)
- AMBER: lib-4324 : UNRECOVERABLE library error lv haiting (Wed Dec 21 2005 - 18:31:46 PST)
- Re: AMBER: lib-4324 : UNRECOVERABLE library error Thomas Cheatham (Wed Dec 21 2005 - 19:16:22 PST)
- Re: AMBER: lib-4324 : UNRECOVERABLE library error lv haiting (Wed Dec 21 2005 - 20:21:50 PST)
- Re: AMBER: lib-4324 : UNRECOVERABLE library error Thomas Cheatham (Wed Dec 21 2005 - 19:16:22 PST)
- Re: AMBER: antechamber problem bybaker.itsa.ucsf.edu (Wed Dec 21 2005 - 21:39:24 PST)
- Re: AMBER: antechamber problem Ilyas Yildirim (Fri Dec 30 2005 - 16:25:38 PST)
- AMBER: Amber crashes at simulation in the NVT ensemble with the periodic box equiilbrated in the NPT ensemble. Sergey Krishtal (Wed Dec 21 2005 - 22:15:14 PST)
- Re: AMBER: Amber crashes at simulation in the NVT ensemble with the periodic box equiilbrated in the NPT ensemble. David A. Case (Thu Dec 22 2005 - 11:56:36 PST)
- AMBER: Merry Xmas Angelo Pugliese (Thu Dec 22 2005 - 03:43:14 PST)
- AMBER: increase the limit of restraintmask Sichun Yang (Thu Dec 22 2005 - 10:58:14 PST)
- AMBER: does the result of H bond is consistent with the ∆Eele of MM_PBSA? haixiao jin (Thu Dec 22 2005 - 20:12:46 PST)
- RE: AMBER: does the result of H bond is consistent with the ?Eele of MM_PBSA? Yong Duan (Thu Dec 22 2005 - 22:43:53 PST)
- Re: AMBER: does the result of H bond is consistent with the ?Eele of MM_PBSA? cristian obiol (Fri Dec 23 2005 - 03:01:42 PST)
- RE: AMBER: does the result of H bond is consistent with the ?Eele of MM_PBSA? Yong Duan (Thu Dec 22 2005 - 22:43:53 PST)
- AMBER: ERROR in readParm: ...failed to find ANGLES_INC_HYDROGEN Priti Hansia (Fri Dec 23 2005 - 03:28:57 PST)
- Re: AMBER: ERROR in readParm: ...failed to find ANGLES_INC_HYDROGEN David A. Case (Tue Dec 27 2005 - 08:17:49 PST)
- Re: AMBER: ERROR in readParm: ...failed to find ANGLES_INC_HYDROGEN Priti Hansia (Tue Dec 27 2005 - 09:35:41 PST)
- Re: AMBER: ERROR in readParm: ...failed to find ANGLES_INC_HYDROGEN David A. Case (Tue Dec 27 2005 - 11:18:06 PST)
- Re: AMBER: ERROR in readParm: ...failed to find ANGLES_INC_HYDROGEN Priti Hansia (Wed Dec 28 2005 - 05:05:56 PST)
- Re: AMBER: ERROR in readParm: ...failed to find ANGLES_INC_HYDROGEN Priti Hansia (Tue Dec 27 2005 - 09:35:41 PST)
- Re: AMBER: ERROR in readParm: ...failed to find ANGLES_INC_HYDROGEN David A. Case (Tue Dec 27 2005 - 08:17:49 PST)
- AMBER: the averaged structure VS the specific snapshot haixiao jin (Thu Dec 22 2005 - 20:24:04 PST)
- RE: AMBER: the averaged structure VS the specific snapshot Yong Duan (Thu Dec 22 2005 - 22:38:00 PST)
- AMBER: ambpdb TER problems Sam (Fri Dec 23 2005 - 08:23:26 PST)
- Re: AMBER: ambpdb TER problems David A. Case (Fri Dec 23 2005 - 17:53:50 PST)
- Re: AMBER: ambpdb TER problems samuel.arey.epfl.ch (Mon Dec 26 2005 - 11:26:27 PST)
- Re: AMBER: ambpdb TER problems David A. Case (Mon Dec 26 2005 - 18:08:26 PST)
- Re: AMBER: ambpdb TER problems Sam (Tue Dec 27 2005 - 08:23:39 PST)
- Re: AMBER: ambpdb TER problems David A. Case (Tue Dec 27 2005 - 12:30:48 PST)
- Re: AMBER: ambpdb TER problems Sam (Wed Dec 28 2005 - 09:17:14 PST)
- Re: AMBER: ambpdb TER problems David A. Case (Fri Dec 30 2005 - 10:05:10 PST)
- Re: AMBER: ambpdb TER problems David A. Case (Mon Dec 26 2005 - 18:08:26 PST)
- Re: AMBER: ambpdb TER problems Bill Ross (Mon Dec 26 2005 - 13:27:07 PST)
- AMBER: To post or mail to the list (subscribers only) ping jiang (Fri Dec 23 2005 - 12:07:45 PST)
- AMBER: (no subject) ping jiang (Fri Dec 23 2005 - 12:46:58 PST)
- Re: AMBER: (no subject) Thomas Cheatham (Fri Dec 23 2005 - 13:37:57 PST)
- Re: AMBER: (no subject) David A. Case (Fri Dec 23 2005 - 17:43:28 PST)
- Re: AMBER: (no subject) ping jiang (Fri Dec 23 2005 - 18:25:19 PST)
- AMBER: problem with improper torsions in parmchk Kateryna Miroshnychenko (Mon Dec 26 2005 - 08:55:54 PST)
- AMBER: building amino acid based surfactants? Eugene Billiot (Mon Dec 26 2005 - 13:25:33 PST)
- Re: AMBER: building amino acid based surfactants? David A. Case (Mon Dec 26 2005 - 17:53:19 PST)
- AMBER: problem with ssh and xleap A D (Tue Dec 27 2005 - 12:12:51 PST)
- Re: AMBER: problem with ssh and xleap Scott Brozell (Wed Dec 28 2005 - 14:02:48 PST)
- Re: AMBER: problem with ssh and xleap A D (Fri Dec 30 2005 - 19:06:15 PST)
- Re: AMBER: problem with ssh and xleap Scott Brozell (Wed Dec 28 2005 - 14:02:48 PST)
- AMBER: problem of calculate the charge ping jiang (Tue Dec 27 2005 - 16:47:16 PST)
- Re: AMBER: problem of calculate the charge David A. Case (Fri Dec 30 2005 - 09:58:47 PST)
- Re: AMBER: problem of calculate the charge ping jiang (Fri Dec 30 2005 - 10:48:41 PST)
- Re: AMBER: problem of calculate the charge David A. Case (Fri Dec 30 2005 - 09:58:47 PST)
- AMBER: problem of calculate the charge2 ping jiang (Tue Dec 27 2005 - 18:17:05 PST)
- AMBER: Question about partial charge for ligand molecules Woojin Lee (Wed Dec 28 2005 - 18:37:47 PST)
- AMBER: non bond over flow S.Sundar Raman (Wed Dec 28 2005 - 19:50:27 PST)
- RE: AMBER: non bond over flow Ross Walker (Thu Dec 29 2005 - 08:15:35 PST)
- AMBER:how to deal with metal ion? snowyowls (Thu Dec 29 2005 - 22:24:58 PST)
- Re: AMBER:how to deal with metal ion? samuel.arey.epfl.ch (Fri Dec 30 2005 - 02:56:08 PST)
- Re: AMBER:how to deal with metal ion? samuel.arey.epfl.ch (Fri Dec 30 2005 - 03:05:39 PST)
- Re: AMBER:how to deal with metal ion? Tim Meyer (Fri Dec 30 2005 - 08:05:06 PST)
- Re: AMBER:how to deal with metal ion? Tim Meyer (Fri Dec 30 2005 - 08:09:07 PST)
- Last message date: Wed Jan 04 2006 - 18:17:07 PST
- Archived on: Mon Jan 05 2009 - 06:09:08 PST
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